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The map label for this gene is 221232820

Identifier: 221232820

GI number: 221232820

Start: 2082216

End: 2083472

Strand: Reverse

Name: 221232820

Synonym: SPN23F_21380

Alternate gene names: NA

Gene position: 2083472-2082216 (Counterclockwise)

Preceding gene: 221232822

Following gene: 221232814

Centisome position: 93.79

GC content: 36.99

Gene sequence:

>1257_bases
ATGGAACAATTACATTTTATCACAAAACTACTCGATATCAAAGACACAAATATCCAAATTATAGATGTCGTCAATAGGGA
TACACACAAGGAAATCATCGCCAAACTGGACTACGACGCCCCATCTTGCCCTGAGTGCGGAAACCAATTGAAGAAATATG
ACTTTCAAAAACCTTCTAAAATTCCTTATCTTGAAACGACTGGTATGCCTACTAGAATTCTCCTTAGAAAGCGTCGATTC
AAGTGCTATCACTGTTCAAAAATGATGGTCGCTGAAACTTCTATCGTCAAGAAGAATCACCAAATCCCTCGTATCATCAA
CCAAAAAATTGCTCAAAAGTTAATTGAAAAAATTTCTATGACTGATATTGCCCATCAGCTTTCCATCTCAACTTCAACTG
TTATTCGTAAGCTCAATGATTTTCACTTTAAACATGATTTTTCTTGTCTTCCTGAGATTATGTCTTGGGATGAGTATGCT
TTTACAAAGGGAAAGATGAGCTTCATTGCGCAAGATTTTAACAATCTCAATATCATCACTGTTCTTGAGGGAAGAACACA
AGCTATCATTCGAAATCACTTTCTTAAATATGATAGAGCCGTCCGATGTCGCGTCAAAATTATTACTATGGATATGTTTA
GTCCTTACTATGACTTAGCTAGACAACTTTTCCCATGTGCTAAAATCGTGTTGGATCGCTTTCACATTGTACAACATCTT
AGCCGTGCTATGAGTCGTGTGCGTGTTCAAATCATGAATCAATTGGATCGAAAGTCTCATGAATACAAGGCTATCAAGCG
CTACTGGAAGCTCATACAACAGGATAGTCGTAAACTCAGCGATAAACATTTTTATCGTCCTACTTTTCGTATGCACTTAA
CCAATAAAGAGATTTTAAACAAGCTTTTGAGCTATTCACAAGACTTGAAACATCACTATCAGCTCTATCAACTCTTGCTG
TTTCACTTTCAGAATAAGGAACCGGAGAAATTTTTCGGACTCATTGAGGACAATCTAAAGCAGGTTCATCCTCTTTTTCA
GACTGTCTTTAAAACCTTTCTAAAGGACAAAGAGAAAATCGTCAACGCCCTTCAACTACACTATTCTAACGCCAAATTGG
AAGCGACCAATAATCTCATCAAACTTATCAAGCGCAATGCCTTTGGTTTTCGGAACTTTGAAAACTTCAAAAAACGGATT
TTTATCGCCCTGAATATCAAAAAAGAAAGGACGAAATTTGTCCTTTCTCGAGCTTAG

Upstream 100 bases:

>100_bases
AAATCCACTATAGATATTATGGAGCCTATTTTATTGTAGAAAAAAAGTCCCATAAGATCTATAATGAAAAGCGACCAAAC
AACTCATTAGAAAGATTCAT

Downstream 100 bases:

>100_bases
CTTTTTTTCAACCCACTACAGTTGACAAAGAGTCGATTTTCATTGAGTATAAAAAGATCTTGGGAAAAGACTCAATTTCA
GTAGAAAAGGAAGTAAATCT

Product: IS1167 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MEQLHFITKLLDIKDTNIQIIDVVNRDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGMPTRILLRKRRF
KCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYA
FTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRAVRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHL
SRAMSRVRVQIMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILNKLLSYSQDLKHHYQLYQLLL
FHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTKFVLSRA

Sequences:

>Translated_418_residues
MEQLHFITKLLDIKDTNIQIIDVVNRDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGMPTRILLRKRRF
KCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYA
FTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRAVRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHL
SRAMSRVRVQIMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILNKLLSYSQDLKHHYQLYQLLL
FHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTKFVLSRA
>Mature_418_residues
MEQLHFITKLLDIKDTNIQIIDVVNRDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGMPTRILLRKRRF
KCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYA
FTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRAVRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHL
SRAMSRVRVQIMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILNKLLSYSQDLKHHYQLYQLLL
FHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTKFVLSRA

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 49967; Mature: 49967

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLHFITKLLDIKDTNIQIIDVVNRDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSK
CCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
IPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISM
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYAFTKGKMSFIAQDFNNLNIIT
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCEEEE
VLEGRTQAIIRNHFLKYDRAVRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHL
EECCCHHHHHHHHHHHHCCCEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRAMSRVRVQIMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHH
KLLSYSQDLKHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKDKEKI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTKFVLSRA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEECHHHHHHHHCCC
>Mature Secondary Structure
MEQLHFITKLLDIKDTNIQIIDVVNRDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSK
CCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
IPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISM
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYAFTKGKMSFIAQDFNNLNIIT
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCEEEE
VLEGRTQAIIRNHFLKYDRAVRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHL
EECCCHHHHHHHHHHHHCCCEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRAMSRVRVQIMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHH
KLLSYSQDLKHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKDKEKI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTKFVLSRA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387149 [H]