Click here to switch to the map view.

The map label for this gene is comYC

Identifier: 221232766

GI number: 221232766

Start: 2009841

End: 2010167

Strand: Reverse

Name: comYC

Synonym: SPN23F_20740

Alternate gene names: NA

Gene position: 2010167-2009841 (Counterclockwise)

Preceding gene: 221232767

Following gene: 221232765

Centisome position: 90.49

GC content: 37.31

Gene sequence:

>327_bases
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTAGTAGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGATAAAAATGAAGATGCTACTCTGAGCAAGTTACAAGGA
GATGGGCGCATCACGGAAGAACAGGTTAAAGCTTATAATGAATACTATACTAAAAATGGAGGGGCAAATCGTAAAGTCAA
TGATTAA

Upstream 100 bases:

>100_bases
GTGCAGCCACTGGTTTTTATCTTTGTGGCACTGATTATCGTTTTACTTTATGCGGCAATGCTCATGCCCATGTATCAAAA
TATGGAGGTAAATTTTTAAA

Downstream 100 bases:

>100_bases
GGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCAGCTCTGTCCAGT
CCACTTTTGCAGCAGTAGAG

Product: competence protein

Products: NA

Alternate protein names: Competence Protein ComGC; Competence Protein ComYC; Competence Protein CglC; ComYC Competence Protein

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDATLSKLQG
DGRITEEQVKAYNEYYTKNGGANRKVND

Sequences:

>Translated_108_residues
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDATLSKLQG
DGRITEEQVKAYNEYYTKNGGANRKVND
>Mature_108_residues
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDATLSKLQG
DGRITEEQVKAYNEYYTKNGGANRKVND

Specific function: Unknown

COG id: COG4537

COG function: function code U; Competence protein ComGC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12143; Mature: 12143

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHH
QAELYSLDKNEDATLSKLQGDGRITEEQVKAYNEYYTKNGGANRKVND
HHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHH
QAELYSLDKNEDATLSKLQGDGRITEEQVKAYNEYYTKNGGANRKVND
HHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA