Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
---|---|
Accession | NC_011900 |
Length | 2,221,315 |
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The map label for this gene is bceR [H]
Identifier: 221232376
GI number: 221232376
Start: 1574336
End: 1575013
Strand: Reverse
Name: bceR [H]
Synonym: SPN23F_16350
Alternate gene names: 221232376
Gene position: 1575013-1574336 (Counterclockwise)
Preceding gene: 221232378
Following gene: 221232375
Centisome position: 70.9
GC content: 43.07
Gene sequence:
>678_bases ATGCACAAGATTTTATTAATAGAAGATGATCAGGTCATTCGTCAACAGGTCGGGAAAATGCTCTCTGAATGGGGATTTGA AGTGGTCCTGGTAGAAGACTTTATGGAAGTTTTGAGTCTATTTGTTCAGTCGGAACCTCATCTGGTCCTCATGGATATTG GTTTGCCCTTGTTTAATGGTTATCACTGGTGTCAGGAAATCCGCAAGATTTCCAAGGTACCTATCATGTTTCTTTCTTCG AGAGACCAGGCTATGGATATTGTCATGGCAATCAATATGGGGGCGGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT TCTTTTAGCTAAGGTTCAGGGCTTGTTGCGTCGTTCCTATGAGTTTGGGCGTGATGAGAGTTTGCTGGAATATGCTGGTG TTATCCTCAATACCAAATCCATGGATTTACATTATCAAGGGCAAGTCTTGAATTTGACCAAGAATGAATTCCAGATTTTA CGCGTGTTATTTGAGCATGCAGGCAACATCGTAGCACGTGACGACCTGATGCGGGAACTTTGGAACAGTGACTTTTTCAT TGATGATAATACCCTCTCTGTCAATGTGGCTCGTTTGCGTAAAAAGTTGGAGGAGCAGGGATTGGTAGGATTTATCGAGA CCAAGAAAGGAATAGGGTACGGATTGAAGCATGCTTGA
Upstream 100 bases:
>100_bases CATTGCCTGTTTGTACTGGCTAAAAACAGGCTATTTCAAATTCAGTTTCAGACCATCTGGCATGGAAAAATCTGTTATAA TAATAGAAAAGGAGAAGCGC
Downstream 100 bases:
>100_bases TTGGAAACAATTTTTTCTAGCCTATCTGCGCTCCCGTAGTCGTCTTTTTATCTATCTGCTTTCTTTGGCATTTCTTGTCT TACTCTTTCAGTTTTTATTT
Product: response regulator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MHKILLIEDDQVIRQQVGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA
Sequences:
>Translated_225_residues MHKILLIEDDQVIRQQVGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA >Mature_225_residues MHKILLIEDDQVIRQQVGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA
Specific function: Member of the two-component regulatory system BceS/BceR involved in the regulation of bacitracin resistance. When activated by BceS, binds to the upstream region of the bceAB promoter and up-regulates the expression of these two genes [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=34.2465753424658, Blast_Score=131, Evalue=4e-32, Organism=Escherichia coli, GI1786599, Length=221, Percent_Identity=29.4117647058824, Blast_Score=127, Evalue=9e-31, Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=29.7297297297297, Blast_Score=120, Evalue=7e-29, Organism=Escherichia coli, GI1788394, Length=219, Percent_Identity=27.8538812785388, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=27.8761061946903, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=30.1801801801802, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=31.0810810810811, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=29.2035398230088, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=29.8245614035088, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1787375, Length=219, Percent_Identity=28.7671232876712, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=6e-23, Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=28.8888888888889, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=32.1266968325792, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=28.1385281385281, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788550, Length=105, Percent_Identity=29.5238095238095, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787487, Length=101, Percent_Identity=31.6831683168317, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25951; Mature: 25951
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKILLIEDDQVIRQQVGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNG CCEEEEECCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCEEEEECCCHHHCH YHWCQEIRKISKVPIMFLSSRDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSY HHHHHHHHHHHCCCEEEECCCCHHEEEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHH EFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQILRVLFEHAGNIVARDDLMREL HCCCCCHHHHHHHHHEECCCCCEEECCEEEECCHHHHHHHHHHHHHHCCEEEHHHHHHHH WNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA CCCCEEEECCCEEEEHHHHHHHHHHCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MHKILLIEDDQVIRQQVGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNG CCEEEEECCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCEEEEECCCHHHCH YHWCQEIRKISKVPIMFLSSRDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSY HHHHHHHHHHHCCCEEEECCCCHHEEEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHH EFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQILRVLFEHAGNIVARDDLMREL HCCCCCHHHHHHHHHEECCCCCEEECCEEEECCHHHHHHHHHHHHHHCCEEEHHHHHHHH WNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA CCCCEEEECCCEEEEHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]