Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
---|---|
Accession | NC_011899 |
Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is yxiO [H]
Identifier: 220933078
GI number: 220933078
Start: 2448568
End: 2449833
Strand: Direct
Name: yxiO [H]
Synonym: Hore_22460
Alternate gene names: 220933078
Gene position: 2448568-2449833 (Clockwise)
Preceding gene: 220933077
Following gene: 220933080
Centisome position: 94.97
GC content: 46.6
Gene sequence:
>1266_bases ATGAAAAACAAAAAACAGGTTTATGCCTGGGCCCTTTATGACTGGGCCAATTCTGCTTTTGCCACCACTATTCTGGCCAC TGTCCTGCCCATCTTTTATAAAGATGTTGCCGCCAGTGGCATACCGGACCACCTGGCTACCTCATACTGGGGGTATACCC AGACCATCGGGATGCTGATTATTGCTATTTTATCCCCCATTCTGGGGGCCATGGCCGACTACTCCCGTTCCAAAAGGCTT TTCCTCAAGGTCTTTGCCTATCTCGGTATGATCGGGACCGGCTTACTGTATTTTGTCGGTGAAGGTGATTATATCCTGGC CTCTTTATTCTTTATTCTGGGCAGCATTGGCTTTTCAGGCGGTAATGTTTTTTATGACAGTTTTTTGCCTGATATTTCTG ACAAAAACAAAATGGATTATGTTTCAGCCCTGGGCTTTGCCGCCGGATACCTGGGTGGAGGTCTTTTACTTCTCATTAAC CTGATAATGATATCAAAACCCCAGCTGTTTGGCCTGTCCAGCACCCTGGCTGCCACCAAAATATCTTTCGTCAGTGTGGC CGTCTGGTGGTTTATTTTCTCGCTGCCTGCCTTTAAGACCCTGCCCTCACCTGATTCCCAACATACCCATCTTACCCTGA AAAAATACGTAAAAGCGGGTTTTAAGAGGCTGGCCACAACCTTTAGAAATATACGGCGTTACCGTGAATTATGGAAGTTT CTCCTGGCCTTCTGGGTTTATAATGACGGAATAGGTACCATAATCAGGATGGCTACCATCTACGGAAGGGAAATAGGAAT AGGCCAGACTGATTTAATCGGGGCTCTCCTCCTGACACAGTTTGTCGGGATACCCTGTGCTCTTCTATTTGGTAAGCTGG GAGAAAAAATAGGTACCAAAAAAGGTATCTTTATTGCCCTTATGATTTATCTCATGATTACTATCAGGGGTTATTATATG ACCACGGCCTTCGATTTCTGGCTCCTGGCCGGTCTGGTAGGACTGGTTCAGGGAGGAGCCCAGGCTTTGAGCCGTTCCCT TTATGGTAGTATGGTTCCTGAAAATAGAACGGCCGAATTCTTTGGTTTTTATGGTATTTCCAGTAAGTTTGCAGCCATTA CCGGCCCCTTCCTCTTTGCCCTGGTAGGACAGCTGACTGAATCCAGCCGCCTGGGGATACTGGCGGTAGCTTCCTTCTTT ATCATCGGTATAATTTTATTGAGCAGGGTTGACATTGAAAAGGGACGGAGTGAGGCCCTGAAATAA
Upstream 100 bases:
>100_bases ACACGCAATAATTTAATGTTAAATAAATGTTAAACAAAAGGTAGATTTAACCCCTTTCCAGAATTAAATAATAGATAATA TTATATTCCGGGGTGATATA
Downstream 100 bases:
>100_bases AAAATCTTAAGTTAACCTTCAACATGGGTAAAAATTAACCTTCAACCTGGACAAGGGGCAGCAGAAAAGACTTTACCTCT TCCTGGTTCAACCTGCCGTT
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKNKKQVYAWALYDWANSAFATTILATVLPIFYKDVAASGIPDHLATSYWGYTQTIGMLIIAILSPILGAMADYSRSKRL FLKVFAYLGMIGTGLLYFVGEGDYILASLFFILGSIGFSGGNVFYDSFLPDISDKNKMDYVSALGFAAGYLGGGLLLLIN LIMISKPQLFGLSSTLAATKISFVSVAVWWFIFSLPAFKTLPSPDSQHTHLTLKKYVKAGFKRLATTFRNIRRYRELWKF LLAFWVYNDGIGTIIRMATIYGREIGIGQTDLIGALLLTQFVGIPCALLFGKLGEKIGTKKGIFIALMIYLMITIRGYYM TTAFDFWLLAGLVGLVQGGAQALSRSLYGSMVPENRTAEFFGFYGISSKFAAITGPFLFALVGQLTESSRLGILAVASFF IIGIILLSRVDIEKGRSEALK
Sequences:
>Translated_421_residues MKNKKQVYAWALYDWANSAFATTILATVLPIFYKDVAASGIPDHLATSYWGYTQTIGMLIIAILSPILGAMADYSRSKRL FLKVFAYLGMIGTGLLYFVGEGDYILASLFFILGSIGFSGGNVFYDSFLPDISDKNKMDYVSALGFAAGYLGGGLLLLIN LIMISKPQLFGLSSTLAATKISFVSVAVWWFIFSLPAFKTLPSPDSQHTHLTLKKYVKAGFKRLATTFRNIRRYRELWKF LLAFWVYNDGIGTIIRMATIYGREIGIGQTDLIGALLLTQFVGIPCALLFGKLGEKIGTKKGIFIALMIYLMITIRGYYM TTAFDFWLLAGLVGLVQGGAQALSRSLYGSMVPENRTAEFFGFYGISSKFAAITGPFLFALVGQLTESSRLGILAVASFF IIGIILLSRVDIEKGRSEALK >Mature_421_residues MKNKKQVYAWALYDWANSAFATTILATVLPIFYKDVAASGIPDHLATSYWGYTQTIGMLIIAILSPILGAMADYSRSKRL FLKVFAYLGMIGTGLLYFVGEGDYILASLFFILGSIGFSGGNVFYDSFLPDISDKNKMDYVSALGFAAGYLGGGLLLLIN LIMISKPQLFGLSSTLAATKISFVSVAVWWFIFSLPAFKTLPSPDSQHTHLTLKKYVKAGFKRLATTFRNIRRYRELWKF LLAFWVYNDGIGTIIRMATIYGREIGIGQTDLIGALLLTQFVGIPCALLFGKLGEKIGTKKGIFIALMIYLMITIRGYYM TTAFDFWLLAGLVGLVQGGAQALSRSLYGSMVPENRTAEFFGFYGISSKFAAITGPFLFALVGQLTESSRLGILAVASFF IIGIILLSRVDIEKGRSEALK
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319811, Length=428, Percent_Identity=22.8971962616822, Blast_Score=83, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46343; Mature: 46343
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKKQVYAWALYDWANSAFATTILATVLPIFYKDVAASGIPDHLATSYWGYTQTIGMLI CCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHH IAILSPILGAMADYSRSKRLFLKVFAYLGMIGTGLLYFVGEGDYILASLFFILGSIGFSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCC GNVFYDSFLPDISDKNKMDYVSALGFAAGYLGGGLLLLINLIMISKPQLFGLSSTLAATK CCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCHHHHHHHH ISFVSVAVWWFIFSLPAFKTLPSPDSQHTHLTLKKYVKAGFKRLATTFRNIRRYRELWKF HHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAFWVYNDGIGTIIRMATIYGREIGIGQTDLIGALLLTQFVGIPCALLFGKLGEKIGTK HHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KGIFIALMIYLMITIRGYYMTTAFDFWLLAGLVGLVQGGAQALSRSLYGSMVPENRTAEF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH FGFYGISSKFAAITGPFLFALVGQLTESSRLGILAVASFFIIGIILLSRVDIEKGRSEAL HEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCC K C >Mature Secondary Structure MKNKKQVYAWALYDWANSAFATTILATVLPIFYKDVAASGIPDHLATSYWGYTQTIGMLI CCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHH IAILSPILGAMADYSRSKRLFLKVFAYLGMIGTGLLYFVGEGDYILASLFFILGSIGFSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCC GNVFYDSFLPDISDKNKMDYVSALGFAAGYLGGGLLLLINLIMISKPQLFGLSSTLAATK CCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHCCHHHHHHHH ISFVSVAVWWFIFSLPAFKTLPSPDSQHTHLTLKKYVKAGFKRLATTFRNIRRYRELWKF HHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAFWVYNDGIGTIIRMATIYGREIGIGQTDLIGALLLTQFVGIPCALLFGKLGEKIGTK HHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KGIFIALMIYLMITIRGYYMTTAFDFWLLAGLVGLVQGGAQALSRSLYGSMVPENRTAEF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH FGFYGISSKFAAITGPFLFALVGQLTESSRLGILAVASFFIIGIILLSRVDIEKGRSEAL HEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]