Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220933033
Identifier: 220933033
GI number: 220933033
Start: 2396445
End: 2396804
Strand: Direct
Name: 220933033
Synonym: Hore_22010
Alternate gene names: NA
Gene position: 2396445-2396804 (Clockwise)
Preceding gene: 220933032
Following gene: 220933035
Centisome position: 92.95
GC content: 31.94
Gene sequence:
>360_bases ATGAAAAGATTAACTACATTTGAAGATATCTTCAATAAGCTTATTAAAGAATATAAAGGAAAAAGGGTCGAAATTCAGAC CAGTCAAAATGGCGTCCCCATAGCCAGTTTAACTACCAGAATTGAAGACATTGTCATTAAACCGGTAAACCGTAAAAAAA TAAAAAAATGGAATAGTGATGGCAGAAAAATAGGATTAATGGTTATCCAGGAAAAAAATAAGCAAAACAGAATTTCCATT CCATTTAAGCTCGGTTATAACACCATGGAAGCCATATTTTTAAAAAATGGAGTCACCATTAAATCCCTGGATATGAAGTT TATTATTAAAAGGTATGGCCGAAAAAAACGTCTGGCTTAA
Upstream 100 bases:
>100_bases TAACAATTTTTATTTATGGAAATAATAGTAACATCAGTAATTTGCATCCATAAAAACAAAGGTCATTTAAATAGACTGTA TGGAGGAGGATATACCAGTT
Downstream 100 bases:
>100_bases CCACTACCTTTAGATAGCTGTTCTTCCATAAAGTCAGGGTCAATTTCATTATTTTTTAAAAGCATATCATCTATCCCTAT TTCACTGTTATAAAGATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKRLTTFEDIFNKLIKEYKGKRVEIQTSQNGVPIASLTTRIEDIVIKPVNRKKIKKWNSDGRKIGLMVIQEKNKQNRISI PFKLGYNTMEAIFLKNGVTIKSLDMKFIIKRYGRKKRLA
Sequences:
>Translated_119_residues MKRLTTFEDIFNKLIKEYKGKRVEIQTSQNGVPIASLTTRIEDIVIKPVNRKKIKKWNSDGRKIGLMVIQEKNKQNRISI PFKLGYNTMEAIFLKNGVTIKSLDMKFIIKRYGRKKRLA >Mature_119_residues MKRLTTFEDIFNKLIKEYKGKRVEIQTSQNGVPIASLTTRIEDIVIKPVNRKKIKKWNSDGRKIGLMVIQEKNKQNRISI PFKLGYNTMEAIFLKNGVTIKSLDMKFIIKRYGRKKRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13942; Mature: 13942
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLTTFEDIFNKLIKEYKGKRVEIQTSQNGVPIASLTTRIEDIVIKPVNRKKIKKWNSD CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHEECCCCHHHHHHCCCC GRKIGLMVIQEKNKQNRISIPFKLGYNTMEAIFLKNGVTIKSLDMKFIIKRYGRKKRLA CCEEEEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCEEEEHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKRLTTFEDIFNKLIKEYKGKRVEIQTSQNGVPIASLTTRIEDIVIKPVNRKKIKKWNSD CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHEECCCCHHHHHHCCCC GRKIGLMVIQEKNKQNRISIPFKLGYNTMEAIFLKNGVTIKSLDMKFIIKRYGRKKRLA CCEEEEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCEEEEHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA