Click here to switch to the map view.

The map label for this gene is yaaH [H]

Identifier: 220933014

GI number: 220933014

Start: 2371686

End: 2372810

Strand: Direct

Name: yaaH [H]

Synonym: Hore_21810

Alternate gene names: 220933014

Gene position: 2371686-2372810 (Clockwise)

Preceding gene: 220933009

Following gene: 220933028

Centisome position: 91.99

GC content: 41.16

Gene sequence:

>1125_bases
ATGTTAGTATCTCCGGTTATATACTGTGCTGCAACATCCAGTGAAGAAGGCCCCGGTACTTTTGACTGGTTAAAAGGTAT
TCTGTTATTAATTATTTCTTTTTTTATTAATAACTTTGTTGATAAAAATGAAGAAGATCAGGAAGCAAGACCCGGTGAAT
CGCCTCTGGATGAAGATATTATCTCAAATCGGGAAATACTGGGCTTTTATGTCAACTGGCTAACCCCATATGCTAATTCA
TATGATGCCATGGTTTCTAACCACAGGTATGTTGACATGGTAGCACCCTTCTGGTTTACAGCCAACCCTGATGGTACAAT
CAAGAGTAGATACGGGGGGCACCAGTATGAGGTAGATTCCTTTTCCAAAAGACAGGGTCTTGAATTACTACCTCTGATTA
ATAACAACCAGAAAAATAACATGATCCTGGTTGATTCAGATGTCAGGAGTAAGACGATAAAAAATATAGTTAAGCTGGTG
GAAAAATATAATTATAATGGAGTAAATATTGACTTTGAATTTATTCCACCCTGGACCCGTAATGGTTATACCCAGTTTAT
TAAAGAGCTTTCCAGTGAGTTAAACAAGAAAAACAAAAAACTTACAATCTCCGTTTTTCCTAAAATAGATGTCCCGATGG
AGTTACAGGGAGCCTATGATTATGCAGCCCTGGGAAAACTGGTTGACAGGGTAGTTATCATGACCTATGACCACCACTGG
CCCTCCGGTGACCCCGGACCGATTGCCCCCATAAACTGGGTCGAAAAGAATATTAAATATGCACTGGAATATATACCAAA
TGAGAAACTTCTAATAGGAGTAGCTAACTACGGCTATGACTGGCCTGAGGGGGGACCCGGTAGGCCCATCAGTGCTAAAG
AAGCAATGAACCTGGCCCGGGAAAAGGGCGTTAAAGTTCAATGGGATACACCTTCCCAGAGCCCCTATTTCTATTACCAG
GATAACAGTGGCATTAAACACGAAGTCTGGTTTGAATCAAGTAGTAGCCTTGCCTTCAAACTGGAGCTGGTTAAGAAATA
TAATCTGAAAGGTATAGCCATCTGGCGGCTGGGAAATGGTACTGACCGGTTCTGGGAGATTATAGACAATAAATTAGGTC
AGTGA

Upstream 100 bases:

>100_bases
TATATTGAAAGGATGTTACTTAAATATGAAACCATCTTATCAACGTAAAAAGTTCATTACTATGCTCCTTCTTGTGTCTA
TTATAACTCCTTTCTTACTT

Downstream 100 bases:

>100_bases
TACCAGACCTCTTTTAAGAGCAACTATAACAGCCTGGGTTCTGTCATTAACTGATAACTTCCTTAAAATATTGCTGACAT
GATTCTTAACAGTTTTTTCA

Product: chitinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MLVSPVIYCAATSSEEGPGTFDWLKGILLLIISFFINNFVDKNEEDQEARPGESPLDEDIISNREILGFYVNWLTPYANS
YDAMVSNHRYVDMVAPFWFTANPDGTIKSRYGGHQYEVDSFSKRQGLELLPLINNNQKNNMILVDSDVRSKTIKNIVKLV
EKYNYNGVNIDFEFIPPWTRNGYTQFIKELSSELNKKNKKLTISVFPKIDVPMELQGAYDYAALGKLVDRVVIMTYDHHW
PSGDPGPIAPINWVEKNIKYALEYIPNEKLLIGVANYGYDWPEGGPGRPISAKEAMNLAREKGVKVQWDTPSQSPYFYYQ
DNSGIKHEVWFESSSSLAFKLELVKKYNLKGIAIWRLGNGTDRFWEIIDNKLGQ

Sequences:

>Translated_374_residues
MLVSPVIYCAATSSEEGPGTFDWLKGILLLIISFFINNFVDKNEEDQEARPGESPLDEDIISNREILGFYVNWLTPYANS
YDAMVSNHRYVDMVAPFWFTANPDGTIKSRYGGHQYEVDSFSKRQGLELLPLINNNQKNNMILVDSDVRSKTIKNIVKLV
EKYNYNGVNIDFEFIPPWTRNGYTQFIKELSSELNKKNKKLTISVFPKIDVPMELQGAYDYAALGKLVDRVVIMTYDHHW
PSGDPGPIAPINWVEKNIKYALEYIPNEKLLIGVANYGYDWPEGGPGRPISAKEAMNLAREKGVKVQWDTPSQSPYFYYQ
DNSGIKHEVWFESSSSLAFKLELVKKYNLKGIAIWRLGNGTDRFWEIIDNKLGQ
>Mature_374_residues
MLVSPVIYCAATSSEEGPGTFDWLKGILLLIISFFINNFVDKNEEDQEARPGESPLDEDIISNREILGFYVNWLTPYANS
YDAMVSNHRYVDMVAPFWFTANPDGTIKSRYGGHQYEVDSFSKRQGLELLPLINNNQKNNMILVDSDVRSKTIKNIVKLV
EKYNYNGVNIDFEFIPPWTRNGYTQFIKELSSELNKKNKKLTISVFPKIDVPMELQGAYDYAALGKLVDRVVIMTYDHHW
PSGDPGPIAPINWVEKNIKYALEYIPNEKLLIGVANYGYDWPEGGPGRPISAKEAMNLAREKGVKVQWDTPSQSPYFYYQ
DNSGIKHEVWFESSSSLAFKLELVKKYNLKGIAIWRLGNGTDRFWEIIDNKLGQ

Specific function: May be required for the L-alanine-stimulated germination pathway [H]

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Spore wall (Probable). Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

Organism=Homo sapiens, GI218083215, Length=325, Percent_Identity=21.2307692307692, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI218083182, Length=325, Percent_Identity=21.2307692307692, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI218083142, Length=325, Percent_Identity=21.2307692307692, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI218083233, Length=325, Percent_Identity=21.2307692307692, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI4758092, Length=315, Percent_Identity=23.1746031746032, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI218083269, Length=151, Percent_Identity=26.4900662251656, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25150970, Length=331, Percent_Identity=23.8670694864048, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71995504, Length=317, Percent_Identity=24.2902208201893, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24582726, Length=361, Percent_Identity=22.4376731301939, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF00704 Glyco_hydro_18; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 42827; Mature: 42827

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSPVIYCAATSSEEGPGTFDWLKGILLLIISFFINNFVDKNEEDQEARPGESPLDEDI
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHH
ISNREILGFYVNWLTPYANSYDAMVSNHRYVDMVAPFWFTANPDGTIKSRYGGHQYEVDS
HCCCCEEEEEEEHHCCCCCCHHHHHCCCEEEEEECCEEEECCCCCCEECCCCCCEEECCC
FSKRQGLELLPLINNNQKNNMILVDSDVRSKTIKNIVKLVEKYNYNGVNIDFEFIPPWTR
CHHHCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
NGYTQFIKELSSELNKKNKKLTISVFPKIDVPMELQGAYDYAALGKLVDRVVIMTYDHHW
CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHEEEEEEEECCC
PSGDPGPIAPINWVEKNIKYALEYIPNEKLLIGVANYGYDWPEGGPGRPISAKEAMNLAR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
EKGVKVQWDTPSQSPYFYYQDNSGIKHEVWFESSSSLAFKLELVKKYNLKGIAIWRLGNG
HCCCEEEECCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEEHHCCCCEEEEEEECCC
TDRFWEIIDNKLGQ
HHHHHHHHHHHCCC
>Mature Secondary Structure
MLVSPVIYCAATSSEEGPGTFDWLKGILLLIISFFINNFVDKNEEDQEARPGESPLDEDI
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHH
ISNREILGFYVNWLTPYANSYDAMVSNHRYVDMVAPFWFTANPDGTIKSRYGGHQYEVDS
HCCCCEEEEEEEHHCCCCCCHHHHHCCCEEEEEECCEEEECCCCCCEECCCCCCEEECCC
FSKRQGLELLPLINNNQKNNMILVDSDVRSKTIKNIVKLVEKYNYNGVNIDFEFIPPWTR
CHHHCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
NGYTQFIKELSSELNKKNKKLTISVFPKIDVPMELQGAYDYAALGKLVDRVVIMTYDHHW
CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCCHHHHHHHHHEEEEEEEECCC
PSGDPGPIAPINWVEKNIKYALEYIPNEKLLIGVANYGYDWPEGGPGRPISAKEAMNLAR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
EKGVKVQWDTPSQSPYFYYQDNSGIKHEVWFESSSSLAFKLELVKKYNLKGIAIWRLGNG
HCCCEEEECCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEEHHCCCCEEEEEEECCC
TDRFWEIIDNKLGQ
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 10419957 [H]