The gene/protein map for NC_011899 is currently unavailable.
Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932974

Identifier: 220932974

GI number: 220932974

Start: 2332265

End: 2332681

Strand: Direct

Name: 220932974

Synonym: Hore_21420

Alternate gene names: NA

Gene position: 2332265-2332681 (Clockwise)

Preceding gene: 220932970

Following gene: 220932985

Centisome position: 90.46

GC content: 33.33

Gene sequence:

>417_bases
ATGCCCTTTGGATATCCTAAAGAAATATTCAAATACCCTCCAATACAATATATCCCCCTAAATCTAAACCGCCTTGAGCA
GGGAAACTCTCCTTTTAACAGTGAATCTATCAACTTTGAACTTTATACCTACCGGGAAAAACAACAATTATTAAATAAAC
TAAGACTTTTAAACATAGATAAAGATTATGATTTTAATCAGGAAGAAATAGCGATACTTGTTTTCAATACAAGGGTTGAT
TTAATTAAATACCGCGGTTATGAAGTTATCATGGTGGGAGAAATAATCAAAAACTACTTCCAGTTATTTACCATAACCAC
CAGGTATTTTTATAAAGATAGAATTCTTTTCAACCTGTATAACGGTGATACTGCTGAAGTCCTGGACCGGGAAAGCTTTG
AATACAACAACCTCTAG

Upstream 100 bases:

>100_bases
TATGCATTTACACCCAAAATGTGAATAATGCAAGGACCCTAATTAATATATATATATTTAGAGTCGAATTTATGATAAAT
TATTAAGGGAGGTTAATTAT

Downstream 100 bases:

>100_bases
GCCTCCTTTTCTTCGACAATGTTAAACTGTATCTTTTCAAATACCTTGGCAAATACTTCTATTATTATTTTACAATTTAT
TATCCCCTTTGATGGATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MPFGYPKEIFKYPPIQYIPLNLNRLEQGNSPFNSESINFELYTYREKQQLLNKLRLLNIDKDYDFNQEEIAILVFNTRVD
LIKYRGYEVIMVGEIIKNYFQLFTITTRYFYKDRILFNLYNGDTAEVLDRESFEYNNL

Sequences:

>Translated_138_residues
MPFGYPKEIFKYPPIQYIPLNLNRLEQGNSPFNSESINFELYTYREKQQLLNKLRLLNIDKDYDFNQEEIAILVFNTRVD
LIKYRGYEVIMVGEIIKNYFQLFTITTRYFYKDRILFNLYNGDTAEVLDRESFEYNNL
>Mature_137_residues
PFGYPKEIFKYPPIQYIPLNLNRLEQGNSPFNSESINFELYTYREKQQLLNKLRLLNIDKDYDFNQEEIAILVFNTRVDL
IKYRGYEVIMVGEIIKNYFQLFTITTRYFYKDRILFNLYNGDTAEVLDRESFEYNNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16759; Mature: 16628

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFGYPKEIFKYPPIQYIPLNLNRLEQGNSPFNSESINFELYTYREKQQLLNKLRLLNID
CCCCCCHHHHCCCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHEECCC
KDYDFNQEEIAILVFNTRVDLIKYRGYEVIMVGEIIKNYFQLFTITTRYFYKDRILFNLY
CCCCCCCCEEEEEEEECCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHEEEECEEEEEEE
NGDTAEVLDRESFEYNNL
CCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PFGYPKEIFKYPPIQYIPLNLNRLEQGNSPFNSESINFELYTYREKQQLLNKLRLLNID
CCCCCHHHHCCCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHEECCC
KDYDFNQEEIAILVFNTRVDLIKYRGYEVIMVGEIIKNYFQLFTITTRYFYKDRILFNLY
CCCCCCCCEEEEEEEECCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHEEEECEEEEEEE
NGDTAEVLDRESFEYNNL
CCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA