Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is crcB [H]
Identifier: 220932928
GI number: 220932928
Start: 2272055
End: 2272423
Strand: Direct
Name: crcB [H]
Synonym: Hore_20960
Alternate gene names: 220932928
Gene position: 2272055-2272423 (Clockwise)
Preceding gene: 220932927
Following gene: 220932932
Centisome position: 88.13
GC content: 37.67
Gene sequence:
>369_bases ATGACCCTGATTTTTATCGGTCTGGGCGGTTTTTTAGGAGCCCTGGCCCGTTATGGAATTACCAGATGGGCAGAAACCAA ATGGGAGGGTTTAATGCCCTATGGGACTTTATTAGCAAATGTAATCGGCTCCTTCCTGCTTGGCCTGCTGATGAGCATAT TTTTAGAAAAAAATATTCATCCTGGAATAAAAGTTGGTCTAACAACCGGTTTTTTAGGGGCTTTTACAACCTTTTCTACT TTCGGTTATGAAACAGCTTCTCTGATTATAAAGAATAACATTCCTACAGCAGGACTCAATATCTTTGCTAATCTATTTTT AGGTTTACTTTTTGTTTTTATGGGAATTTATCTGGGCAAACTAATATAA
Upstream 100 bases:
>100_bases CCCGACTATACTCCACTGTTTGCAAGTCAAAAAGAACTTGACATAATCGGTCAAATAATTATGGTAATTTTCAAAGTAAA TTAAAAGGAGGATTTATACT
Downstream 100 bases:
>100_bases CTATTATAAAAGTATACCTGCTATAAAGGGAAAAATTTAAGGTATAAACACCCTGAATTTACTTTTTTAAAGCTTAATAA CCAAAAATACAACCTCCATA
Product: CrcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTLIFIGLGGFLGALARYGITRWAETKWEGLMPYGTLLANVIGSFLLGLLMSIFLEKNIHPGIKVGLTTGFLGAFTTFST FGYETASLIIKNNIPTAGLNIFANLFLGLLFVFMGIYLGKLI
Sequences:
>Translated_122_residues MTLIFIGLGGFLGALARYGITRWAETKWEGLMPYGTLLANVIGSFLLGLLMSIFLEKNIHPGIKVGLTTGFLGAFTTFST FGYETASLIIKNNIPTAGLNIFANLFLGLLFVFMGIYLGKLI >Mature_121_residues TLIFIGLGGFLGALARYGITRWAETKWEGLMPYGTLLANVIGSFLLGLLMSIFLEKNIHPGIKVGLTTGFLGAFTTFSTF GYETASLIIKNNIPTAGLNIFANLFLGLLFVFMGIYLGKLI
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13231; Mature: 13100
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIFIGLGGFLGALARYGITRWAETKWEGLMPYGTLLANVIGSFLLGLLMSIFLEKNIH CEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGIKVGLTTGFLGAFTTFSTFGYETASLIIKNNIPTAGLNIFANLFLGLLFVFMGIYLGK CCCEEHHHHHHHHHHHHHHHCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LI CC >Mature Secondary Structure TLIFIGLGGFLGALARYGITRWAETKWEGLMPYGTLLANVIGSFLLGLLMSIFLEKNIH EEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGIKVGLTTGFLGAFTTFSTFGYETASLIIKNNIPTAGLNIFANLFLGLLFVFMGIYLGK CCCEEHHHHHHHHHHHHHHHCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA