Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
---|---|
Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is yuiD [H]
Identifier: 220932274
GI number: 220932274
Start: 1523903
End: 1524331
Strand: Direct
Name: yuiD [H]
Synonym: Hore_14380
Alternate gene names: 220932274
Gene position: 1523903-1524331 (Clockwise)
Preceding gene: 220932242
Following gene: 220932282
Centisome position: 59.11
GC content: 39.16
Gene sequence:
>429_bases ATGAGTTTGCTTGAAATTTCCTTGCTTTCACTATTTATAGCCCAGGTCTTAAAAATCTTTACAACTCTGCCACCTGACTT TAGCCGGATTATAGGTTCAGGAGGAATGCCAAGCTCCCATGCTTCCTTTGTATCTACTCTCTCCACTACAGTAGGGTTGA ATTACGGGTTTGATTCCGACCTCTTTGCAATTGTTACTGTTTTTTCATTAATAATAATATACGATGCCGGTGGTGTCAGA CGGGCCGTTGGCGAACAGGCCAATGTTCTCAACCATTTAATAAAACACCTGGAACTGGGTAAACTCGGCAAAGAAAAAAA AATAATTAAAAAAGACCTCAGGGAGTTAATAGGCCATACTCCCTTTGAAGTCCTGGCTGGTACAATATTAGGTGTTTTCA TTGCCCTCATAAATTATTATTATCTTTAA
Upstream 100 bases:
>100_bases CCCGTAATTAACACCTTTTATATACAAAACACCTTGCAATAGGAAAATTTTTTTTATACAATTAAATTTGTTTAAAAAGT GATTCTTTAGAGGTGTTATT
Downstream 100 bases:
>100_bases TCCTAATATACCTAACTTTACTTAACACTATATTGTCAATAATATATTAACAAAAACATAATATCACAAACCTATAATTC CTCTTTTATATATTTCTCCA
Product: acid phosphatase/vanadium-dependent haloperoxidase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSLLEISLLSLFIAQVLKIFTTLPPDFSRIIGSGGMPSSHASFVSTLSTTVGLNYGFDSDLFAIVTVFSLIIIYDAGGVR RAVGEQANVLNHLIKHLELGKLGKEKKIIKKDLRELIGHTPFEVLAGTILGVFIALINYYYL
Sequences:
>Translated_142_residues MSLLEISLLSLFIAQVLKIFTTLPPDFSRIIGSGGMPSSHASFVSTLSTTVGLNYGFDSDLFAIVTVFSLIIIYDAGGVR RAVGEQANVLNHLIKHLELGKLGKEKKIIKKDLRELIGHTPFEVLAGTILGVFIALINYYYL >Mature_141_residues SLLEISLLSLFIAQVLKIFTTLPPDFSRIIGSGGMPSSHASFVSTLSTTVGLNYGFDSDLFAIVTVFSLIIIYDAGGVRR AVGEQANVLNHLIKHLELGKLGKEKKIIKKDLRELIGHTPFEVLAGTILGVFIALINYYYL
Specific function: Unknown
COG id: COG1963
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003832 [H]
Pfam domain/function: PF02681 DUF212 [H]
EC number: NA
Molecular weight: Translated: 15527; Mature: 15395
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLEISLLSLFIAQVLKIFTTLPPDFSRIIGSGGMPSSHASFVSTLSTTVGLNYGFDSD CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHH LFAIVTVFSLIIIYDAGGVRRAVGEQANVLNHLIKHLELGKLGKEKKIIKKDLRELIGHT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC PFEVLAGTILGVFIALINYYYL CHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLLEISLLSLFIAQVLKIFTTLPPDFSRIIGSGGMPSSHASFVSTLSTTVGLNYGFDSD CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHH LFAIVTVFSLIIIYDAGGVRRAVGEQANVLNHLIKHLELGKLGKEKKIIKKDLRELIGHT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC PFEVLAGTILGVFIALINYYYL CHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]