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The map label for this gene is 220931963

Identifier: 220931963

GI number: 220931963

Start: 1218363

End: 1219106

Strand: Direct

Name: 220931963

Synonym: Hore_11240

Alternate gene names: NA

Gene position: 1218363-1219106 (Clockwise)

Preceding gene: 220931962

Following gene: 220931966

Centisome position: 47.26

GC content: 32.26

Gene sequence:

>744_bases
ATGAAATTTGTTTTTGAAGTAATTATTAATGGATTAGTTATTTTATATTTATATAGGCCTGTTGTTAAAAAATATTTTGG
TATAAGTCAGAAATACCGTATTATAAGGATTGTAGTAAGTATCTGTCTTATTTCAATTCCTTTATTTATCTCAGTTTTAC
CATCATTGATTGATCAGTTTACATATTTTTATTATATGGGCCAGTTGGGTGAAATCAGTGAAATTTATTTACAGGGAGAT
CTGGATAGGGCCCTGACAGAAGCAAATAAGTTTGTAAAAAAATACCCGGAAAATGACCTGGCCTGGACTATAAGAGGAAA
TATACTTTTAGATAAAGGCATGGTTAATGAAGCTGAAAAAAGCTTCAAAAAGGCCCTTATAATTAATCCCGAAAACTTCA
GGGCAAAAAGCACTTTAGGACTGGTTTATAAAATGAGAGGAGACCTTGACAAAGCCCTTAGCCAGTACAAAAAAGCCATT
GAAATCAAACCAAATTATGGTCAGGCCTATACCAATATTGCTGTTGTTAAACTTATGCAGGGTCTTTATGAAGAGTCTTT
ACATTATGCAAAACTAGGTTATAAATATGATAAAAGTGACCCTGTTATTGTAGCTAACCTGTCATTTTGCTATCATGCTG
TGGGGGACTATAAAAACCGGGATAGATATTTAAAAATGGCAGAAGAGATGGGGTATAAAAATGTTGAGGTCTTAAAAAGT
GTTTATACTGAAGAAAGTAATTAA

Upstream 100 bases:

>100_bases
TAAAAGATGGGCTTACTGGCTTGCTTTAATTATATTTTTTCTTTCTATTGGCAGGAGTATAAGTATCAATATACTTTCTT
TTTACAATTTCCAGTTTAGT

Downstream 100 bases:

>100_bases
TATTTTTAGACTTTTTATAAAAACGGAAAAGTTTTTGATCAAAAATGAATAAACAATAAAAAAGATTAGAATAAACCAAG
GAGTAGCCGGAAGCTACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family Protein; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Sporulation Domain Protein

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKFVFEVIINGLVILYLYRPVVKKYFGISQKYRIIRIVVSICLISIPLFISVLPSLIDQFTYFYYMGQLGEISEIYLQGD
LDRALTEANKFVKKYPENDLAWTIRGNILLDKGMVNEAEKSFKKALIINPENFRAKSTLGLVYKMRGDLDKALSQYKKAI
EIKPNYGQAYTNIAVVKLMQGLYEESLHYAKLGYKYDKSDPVIVANLSFCYHAVGDYKNRDRYLKMAEEMGYKNVEVLKS
VYTEESN

Sequences:

>Translated_247_residues
MKFVFEVIINGLVILYLYRPVVKKYFGISQKYRIIRIVVSICLISIPLFISVLPSLIDQFTYFYYMGQLGEISEIYLQGD
LDRALTEANKFVKKYPENDLAWTIRGNILLDKGMVNEAEKSFKKALIINPENFRAKSTLGLVYKMRGDLDKALSQYKKAI
EIKPNYGQAYTNIAVVKLMQGLYEESLHYAKLGYKYDKSDPVIVANLSFCYHAVGDYKNRDRYLKMAEEMGYKNVEVLKS
VYTEESN
>Mature_247_residues
MKFVFEVIINGLVILYLYRPVVKKYFGISQKYRIIRIVVSICLISIPLFISVLPSLIDQFTYFYYMGQLGEISEIYLQGD
LDRALTEANKFVKKYPENDLAWTIRGNILLDKGMVNEAEKSFKKALIINPENFRAKSTLGLVYKMRGDLDKALSQYKKAI
EIKPNYGQAYTNIAVVKLMQGLYEESLHYAKLGYKYDKSDPVIVANLSFCYHAVGDYKNRDRYLKMAEEMGYKNVEVLKS
VYTEESN

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=148, Percent_Identity=27.7027027027027, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI32307148, Length=148, Percent_Identity=27.7027027027027, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=148, Percent_Identity=27.7027027027027, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=148, Percent_Identity=27.7027027027027, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28602; Mature: 28602

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVFEVIINGLVILYLYRPVVKKYFGISQKYRIIRIVVSICLISIPLFISVLPSLIDQF
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYFYYMGQLGEISEIYLQGDLDRALTEANKFVKKYPENDLAWTIRGNILLDKGMVNEAEK
HHHHHHCCCCCHHHHHEECCHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCCHHHHHH
SFKKALIINPENFRAKSTLGLVYKMRGDLDKALSQYKKAIEIKPNYGQAYTNIAVVKLMQ
HHHHEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHH
GLYEESLHYAKLGYKYDKSDPVIVANLSFCYHAVGDYKNRDRYLKMAEEMGYKNVEVLKS
HHHHHHHHHHHHCCEECCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHH
VYTEESN
HHHCCCC
>Mature Secondary Structure
MKFVFEVIINGLVILYLYRPVVKKYFGISQKYRIIRIVVSICLISIPLFISVLPSLIDQF
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYFYYMGQLGEISEIYLQGDLDRALTEANKFVKKYPENDLAWTIRGNILLDKGMVNEAEK
HHHHHHCCCCCHHHHHEECCHHHHHHHHHHHHHHCCCCCCEEEEECCEEECCCCHHHHHH
SFKKALIINPENFRAKSTLGLVYKMRGDLDKALSQYKKAIEIKPNYGQAYTNIAVVKLMQ
HHHHEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHH
GLYEESLHYAKLGYKYDKSDPVIVANLSFCYHAVGDYKNRDRYLKMAEEMGYKNVEVLKS
HHHHHHHHHHHHCCEECCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHH
VYTEESN
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA