Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
---|---|
Accession | NC_011899 |
Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is ylaK [H]
Identifier: 220931934
GI number: 220931934
Start: 1187740
End: 1189059
Strand: Direct
Name: ylaK [H]
Synonym: Hore_10930
Alternate gene names: 220931934
Gene position: 1187740-1189059 (Clockwise)
Preceding gene: 220931933
Following gene: 220931936
Centisome position: 46.07
GC content: 37.12
Gene sequence:
>1320_bases ATGGCCAGTAAAATATTTGTACTTGATACCAATGTATTATTAATGGACCCGATGGCTATTTATTCTTTTGACGAACATGA AATAGTTATTCCCTTACCGGTAGTGGAAGAGATAGATAATTTAAAAAACAAGAATAATTCAATCGGGTATAATGCCCGGG AGACTTCCAGGATTTTAAATGACCTGAGGAGTAAAGGTCGCCTTAATGAGGGAGTAGAACTTCCTGATGGAGGTTTATTA AGACTAGTGATAGATTTTAATGATATGGTTTTACCTAAAGGTTTAAGTTTTACCAAAATGGATAACCGTATCTTATCTAC TGCTATTAATATAAAAAAAGAAGAACCCGGGCGGGAAGTAATTCTGGTATCAAATGATATTAATTTAAGATTAATAGCCG ATGCCTTTGGTTTAAAAGCTGAAGAACATAAATCCAGCAGGTTAAAAGATGAAGATATATATACAGGAATTAAAGAAATT GATGTTCCTTCTAAAGTAATAGATTTATTTTTTAGTAATGAGGGTATTCCCCCTGAGGATATAAATAATGAGAATATAGA ACTATATCCCCAGGAAATGGTTCAGTTTAATGCAATTGATGTTGAAAACAAACATGCCCTCGGGAGATATGATGGTAACA GGGTGGTACCCTTTAAATTTTTGCGAAAACAGGCCTGGGGTATTAAACCAAGAAACAGGGAACAGTCCATGGCCTTTGAA TTGTTACTCAATGATGATATTAAGTTAGTAACCCTTGCTGGAAAGGCAGGGACCGGGAAAACCCTGTTAGCCCTTGCCTG TGGCCTGGCCAAAGTGACTGATGAAGGAAGGTATAACCGTCTTCTGGTTGCCAGACCGGTTGTTCCCATGGGTAATGATA TAGGTTTTCTTCCGGGGAGCAAAGAAGAGAAGTTACAGCCCTGGATGCAACCAATATTTGACAACCTTGAATATATCCTG GGGCAACCCGATAATAGTTCCGATTATTCTTTTGAATATCTGGTTGATAAAGATTTAATTCAGGTGGAGGCATTAACCTA TATTAGAGGTAGATCTATTCCCGGTCAGTTTATAATAATTGATGAGGCCCAGAATTTATCCAGTCATGAGATAAAAACAA TTATAACCAGGGTTGGTAAGGGTAGCAAGATAGTTTTAACCGGAGATCCTTACCAGATAGATAACCCTTATTTAGATTTA CACAATAATGGCTTAACCCATCTGGCACACAAATTTCATCAGGAGAAAATAGGAGGTCATGTTACCCTTGTTAAAGGGGA AAGGTCAGAGCTTGCCGAAATAGCAAGTAAAATTTTATAA
Upstream 100 bases:
>100_bases ATTCAGGAATTAATAGGAGAAAAACTTGAGAGAACTTTTGATAAGAAAACAGGTCTCTCATTGTGGTCAATGTAAGGTTC TAAATGAAGGGAGGGGAGTT
Downstream 100 bases:
>100_bases CTCTGAAATATAATAGCTTCCAGGGGATTTTTATAATTCTGGTTGTAAAAAACTGGACGCGACTTCTGTTATAAAACAAA TGCCTCTCCATTTCCTTTAA
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MASKIFVLDTNVLLMDPMAIYSFDEHEIVIPLPVVEEIDNLKNKNNSIGYNARETSRILNDLRSKGRLNEGVELPDGGLL RLVIDFNDMVLPKGLSFTKMDNRILSTAINIKKEEPGREVILVSNDINLRLIADAFGLKAEEHKSSRLKDEDIYTGIKEI DVPSKVIDLFFSNEGIPPEDINNENIELYPQEMVQFNAIDVENKHALGRYDGNRVVPFKFLRKQAWGIKPRNREQSMAFE LLLNDDIKLVTLAGKAGTGKTLLALACGLAKVTDEGRYNRLLVARPVVPMGNDIGFLPGSKEEKLQPWMQPIFDNLEYIL GQPDNSSDYSFEYLVDKDLIQVEALTYIRGRSIPGQFIIIDEAQNLSSHEIKTIITRVGKGSKIVLTGDPYQIDNPYLDL HNNGLTHLAHKFHQEKIGGHVTLVKGERSELAEIASKIL
Sequences:
>Translated_439_residues MASKIFVLDTNVLLMDPMAIYSFDEHEIVIPLPVVEEIDNLKNKNNSIGYNARETSRILNDLRSKGRLNEGVELPDGGLL RLVIDFNDMVLPKGLSFTKMDNRILSTAINIKKEEPGREVILVSNDINLRLIADAFGLKAEEHKSSRLKDEDIYTGIKEI DVPSKVIDLFFSNEGIPPEDINNENIELYPQEMVQFNAIDVENKHALGRYDGNRVVPFKFLRKQAWGIKPRNREQSMAFE LLLNDDIKLVTLAGKAGTGKTLLALACGLAKVTDEGRYNRLLVARPVVPMGNDIGFLPGSKEEKLQPWMQPIFDNLEYIL GQPDNSSDYSFEYLVDKDLIQVEALTYIRGRSIPGQFIIIDEAQNLSSHEIKTIITRVGKGSKIVLTGDPYQIDNPYLDL HNNGLTHLAHKFHQEKIGGHVTLVKGERSELAEIASKIL >Mature_438_residues ASKIFVLDTNVLLMDPMAIYSFDEHEIVIPLPVVEEIDNLKNKNNSIGYNARETSRILNDLRSKGRLNEGVELPDGGLLR LVIDFNDMVLPKGLSFTKMDNRILSTAINIKKEEPGREVILVSNDINLRLIADAFGLKAEEHKSSRLKDEDIYTGIKEID VPSKVIDLFFSNEGIPPEDINNENIELYPQEMVQFNAIDVENKHALGRYDGNRVVPFKFLRKQAWGIKPRNREQSMAFEL LLNDDIKLVTLAGKAGTGKTLLALACGLAKVTDEGRYNRLLVARPVVPMGNDIGFLPGSKEEKLQPWMQPIFDNLEYILG QPDNSSDYSFEYLVDKDLIQVEALTYIRGRSIPGQFIIIDEAQNLSSHEIKTIITRVGKGSKIVLTGDPYQIDNPYLDLH NNGLTHLAHKFHQEKIGGHVTLVKGERSELAEIASKIL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=169, Percent_Identity=39.0532544378698, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1787257, Length=191, Percent_Identity=31.9371727748691, Blast_Score=95, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 49372; Mature: 49241
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKIFVLDTNVLLMDPMAIYSFDEHEIVIPLPVVEEIDNLKNKNNSIGYNARETSRILN CCCEEEEEECCEEEECCHHEEECCCCCEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHH DLRSKGRLNEGVELPDGGLLRLVIDFNDMVLPKGLSFTKMDNRILSTAINIKKEEPGREV HHHHCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCHHHHHHHHHHHEECCCCCCCCEE ILVSNDINLRLIADAFGLKAEEHKSSRLKDEDIYTGIKEIDVPSKVIDLFFSNEGIPPED EEEECCCCEEEEEHHHCCCCHHHHHHCCCCHHHHCCHHHCCCCHHHHHHHCCCCCCCCCC INNENIELYPQEMVQFNAIDVENKHALGRYDGNRVVPFKFLRKQAWGIKPRNREQSMAFE CCCCCEEEEEHHHEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCHHEEEE LLLNDDIKLVTLAGKAGTGKTLLALACGLAKVTDEGRYNRLLVARPVVPMGNDIGFLPGS EEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEECCCCC KEEKLQPWMQPIFDNLEYILGQPDNSSDYSFEYLVDKDLIQVEALTYIRGRSIPGQFIII CHHHHHHHHHHHHHCHHEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEE DEAQNLSSHEIKTIITRVGKGSKIVLTGDPYQIDNPYLDLHNNGLTHLAHKFHQEKIGGH ECCCCCCHHHHHHHHHHCCCCCEEEEECCCEECCCCEEEECCCCHHHHHHHHHHHHCCCE VTLVKGERSELAEIASKIL EEEEECCHHHHHHHHHHCC >Mature Secondary Structure ASKIFVLDTNVLLMDPMAIYSFDEHEIVIPLPVVEEIDNLKNKNNSIGYNARETSRILN CCEEEEEECCEEEECCHHEEECCCCCEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHH DLRSKGRLNEGVELPDGGLLRLVIDFNDMVLPKGLSFTKMDNRILSTAINIKKEEPGREV HHHHCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCHHHHHHHHHHHEECCCCCCCCEE ILVSNDINLRLIADAFGLKAEEHKSSRLKDEDIYTGIKEIDVPSKVIDLFFSNEGIPPED EEEECCCCEEEEEHHHCCCCHHHHHHCCCCHHHHCCHHHCCCCHHHHHHHCCCCCCCCCC INNENIELYPQEMVQFNAIDVENKHALGRYDGNRVVPFKFLRKQAWGIKPRNREQSMAFE CCCCCEEEEEHHHEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCHHEEEE LLLNDDIKLVTLAGKAGTGKTLLALACGLAKVTDEGRYNRLLVARPVVPMGNDIGFLPGS EEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEECCCCC KEEKLQPWMQPIFDNLEYILGQPDNSSDYSFEYLVDKDLIQVEALTYIRGRSIPGQFIII CHHHHHHHHHHHHHCHHEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEE DEAQNLSSHEIKTIITRVGKGSKIVLTGDPYQIDNPYLDLHNNGLTHLAHKFHQEKIGGH ECCCCCCHHHHHHHHHHCCCCCEEEEECCCEECCCCEEEECCCCHHHHHHHHHHHHCCCE VTLVKGERSELAEIASKIL EEEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]