Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220931893
Identifier: 220931893
GI number: 220931893
Start: 1139709
End: 1140158
Strand: Direct
Name: 220931893
Synonym: Hore_10500
Alternate gene names: NA
Gene position: 1139709-1140158 (Clockwise)
Preceding gene: 220931892
Following gene: 220931894
Centisome position: 44.21
GC content: 26.89
Gene sequence:
>450_bases ATGAGAATAATATTTCATCATAGAAGAAATGACCTGCTTTCTGAGTTTATTATTAAATATTATTTAAAATATGAAGAGGT TAAAAATAAAGATGGTCAGACAGAATTTAAGAAAAAATTAATCAGGGAAGTTGTAAATGAAGTTGTTCCTCAATACAAAC CAGGGGAATTAAATTTTATTGGGCTAGATGGTTATGGAAACCAGGTTCTATTCATTAATAGAAAAAAACATGAGAAAATT GTTTTCAGGACTCTTTTGGGTATTAACAGGATTTTCTCAAGAAATAGTCCGATAATCCTCTTTAATGTAAGTGCTTTTGA GAATTATTATATAAAATTGGCAATATTTTTTAAAAGTATCGGAAATAACTATTATTGTAACAAGTTTCTGGAAAATGGTC TTGATATAAATATAAAAACCCTGGAAGATTATTTTGCAAGGTTAAATTGA
Upstream 100 bases:
>100_bases GTTGACCCTGGGTATGGTTCATGACCTGGGTAATGGAGTCAAAATTATTATAAGACATTAACTAAAATTCTCTGTTCTAA TATAGATATAAGGTGAAAAT
Downstream 100 bases:
>100_bases CATCAATAATAAGATTTAATAAGACCTGATGCTAAGACTTAATACGAGGTGGCCTTATGGTTATTATTTATTCCTGCTTT GGTAGTGCCCATTCTTCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRIIFHHRRNDLLSEFIIKYYLKYEEVKNKDGQTEFKKKLIREVVNEVVPQYKPGELNFIGLDGYGNQVLFINRKKHEKI VFRTLLGINRIFSRNSPIILFNVSAFENYYIKLAIFFKSIGNNYYCNKFLENGLDINIKTLEDYFARLN
Sequences:
>Translated_149_residues MRIIFHHRRNDLLSEFIIKYYLKYEEVKNKDGQTEFKKKLIREVVNEVVPQYKPGELNFIGLDGYGNQVLFINRKKHEKI VFRTLLGINRIFSRNSPIILFNVSAFENYYIKLAIFFKSIGNNYYCNKFLENGLDINIKTLEDYFARLN >Mature_149_residues MRIIFHHRRNDLLSEFIIKYYLKYEEVKNKDGQTEFKKKLIREVVNEVVPQYKPGELNFIGLDGYGNQVLFINRKKHEKI VFRTLLGINRIFSRNSPIILFNVSAFENYYIKLAIFFKSIGNNYYCNKFLENGLDINIKTLEDYFARLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17857; Mature: 17857
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIFHHRRNDLLSEFIIKYYLKYEEVKNKDGQTEFKKKLIREVVNEVVPQYKPGELNFI CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE GLDGYGNQVLFINRKKHEKIVFRTLLGINRIFSRNSPIILFNVSAFENYYIKLAIFFKSI EECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHEEHEEEEHHH GNNYYCNKFLENGLDINIKTLEDYFARLN CCCCEEHHHHHCCCCEEEEHHHHHHHHCC >Mature Secondary Structure MRIIFHHRRNDLLSEFIIKYYLKYEEVKNKDGQTEFKKKLIREVVNEVVPQYKPGELNFI CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE GLDGYGNQVLFINRKKHEKIVFRTLLGINRIFSRNSPIILFNVSAFENYYIKLAIFFKSI EECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHEEHEEEEHHH GNNYYCNKFLENGLDINIKTLEDYFARLN CCCCEEHHHHHCCCCEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA