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The map label for this gene is dcd [H]

Identifier: 221230833

GI number: 221230833

Start: 2987816

End: 2988388

Strand: Reverse

Name: dcd [H]

Synonym: MLBr_02507

Alternate gene names: 221230833

Gene position: 2988388-2987816 (Counterclockwise)

Preceding gene: 221230834

Following gene: 221230832

Centisome position: 91.44

GC content: 57.77

Gene sequence:

>573_bases
GTGCTGCTCTCCGATCGTGACCTCAGGGCCGAAATCACCGCCGGCCGATTCAGCATCGATCCGTTCGACGACACCCTGGT
GCAGCCGTCCAGCATTGATGTTCGCCTTGACTGCATGTTCCGCGTGTTCAACAACACCCGCTACACTCACATCGACCCCG
CGCGACAACAGGATGAGCTGACGAGCCTGGTAGAACTGGTTGACGGGGAACCGTTTGTACTGCACCCGGGTGGATTTGTG
CTTGGCTCCACGCTAGAATTATTCACCCTGCCCGAGGACTTAGCAGGACGGCTGGAAGGCAAATCATCGCTGGGCCGGCT
GGGCCTGTTGACGCACTCGACCGCGGGTTTCATTGATCCTGGCTTCTGTGGCCACATCACGCTCGAACTGTCCAATGTTG
CTAACTTGCCGATCACCCTGTGGCCAGGCATGAAGATCGGCCAGCTGTGCGTTTTGCGCTTGACCAGTCCGGCGGAACAT
CCCTACGGTAGTGCGAGCGCGGGGTCAAAATATCAGGGTCAACGGGGGCCGACACCATCCCGAAGCTACGAGAATTTCAT
AAAAAATACCTAG

Upstream 100 bases:

>100_bases
CCGGGGGCGGGTACCCCACGGGTCAGGAAAACGACCTCTGCTAACGGGGTGGATCCGGTGACGCTAATTGAATGTAGTCG
GTGGCAGATACGCTCATCGG

Downstream 100 bases:

>100_bases
CTTCTACCGGCACGCAGCACAGTCTTCCCGGCCATAGTCTGCGCTGTCGTGTGGTTTCTCCTCCGCTCAGATTACGGCTG
TCTCGCAAAATTTTTGGCGA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLLSDRDLRAEITAGRFSIDPFDDTLVQPSSIDVRLDCMFRVFNNTRYTHIDPARQQDELTSLVELVDGEPFVLHPGGFV
LGSTLELFTLPEDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFCGHITLELSNVANLPITLWPGMKIGQLCVLRLTSPAEH
PYGSASAGSKYQGQRGPTPSRSYENFIKNT

Sequences:

>Translated_190_residues
MLLSDRDLRAEITAGRFSIDPFDDTLVQPSSIDVRLDCMFRVFNNTRYTHIDPARQQDELTSLVELVDGEPFVLHPGGFV
LGSTLELFTLPEDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFCGHITLELSNVANLPITLWPGMKIGQLCVLRLTSPAEH
PYGSASAGSKYQGQRGPTPSRSYENFIKNT
>Mature_190_residues
MLLSDRDLRAEITAGRFSIDPFDDTLVQPSSIDVRLDCMFRVFNNTRYTHIDPARQQDELTSLVELVDGEPFVLHPGGFV
LGSTLELFTLPEDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFCGHITLELSNVANLPITLWPGMKIGQLCVLRLTSPAEH
PYGSASAGSKYQGQRGPTPSRSYENFIKNT

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=190, Percent_Identity=42.6315789473684, Blast_Score=134, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 20821; Mature: 20821

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSDRDLRAEITAGRFSIDPFDDTLVQPSSIDVRLDCMFRVFNNTRYTHIDPARQQDEL
CCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCEEHEEEEEECCCCCEEEECCCCCHHHH
TSLVELVDGEPFVLHPGGFVLGSTLELFTLPEDLAGRLEGKSSLGRLGLLTHSTAGFIDP
HHHHHHHCCCCEEECCCCEEECCEEEEEECCHHHHHHCCCCCCCCEEEEEEECCCCCCCC
GFCGHITLELSNVANLPITLWPGMKIGQLCVLRLTSPAEHPYGSASAGSKYQGQRGPTPS
CCCEEEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RSYENFIKNT
HHHHHHHCCC
>Mature Secondary Structure
MLLSDRDLRAEITAGRFSIDPFDDTLVQPSSIDVRLDCMFRVFNNTRYTHIDPARQQDEL
CCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCEEHEEEEEECCCCCEEEECCCCCHHHH
TSLVELVDGEPFVLHPGGFVLGSTLELFTLPEDLAGRLEGKSSLGRLGLLTHSTAGFIDP
HHHHHHHCCCCEEECCCCEEECCEEEEEECCHHHHHHCCCCCCCCEEEEEEECCCCCCCC
GFCGHITLELSNVANLPITLWPGMKIGQLCVLRLTSPAEHPYGSASAGSKYQGQRGPTPS
CCCEEEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RSYENFIKNT
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA