| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is recN
Identifier: 221230184
GI number: 221230184
Start: 1619807
End: 1621570
Strand: Direct
Name: recN
Synonym: MLBr_01360
Alternate gene names: 221230184
Gene position: 1619807-1621570 (Clockwise)
Preceding gene: 221230183
Following gene: 221230185
Centisome position: 49.56
GC content: 61.73
Gene sequence:
>1764_bases ATGTTGACGGAAATACGAATCGAGTCGTTGGGCGCTATCAGCGTTGCGACAGCTGAGTTCGATCGGGGCCTGACTGTACT GACCGGCGAAACCGGTACTGGCAAGACCATGGTGGTGACGGGGCTGCATCTGCTCGGCGGGGCTCGCGCCGACGCAAGCC GTGTCCGATCAGGAGCTAACCGTGCTGTTGTCGAAGGCCGGTTCACGACGACCGACCTAGACGATGTTGTAGTCGCGCAG CTTGACGGGATACTTAACGCGTCGGGATCAGAGCGCGATGAGGATGGCAGCGTGATCGTGCTGCGCTCGGTCAGCCGCGA CGGGCCTTCTCGCTCCTATCTCGGTGGTCGCAGCGTGCCGGCCAAGTCACTGGGCAGTTTCACCACTGAGTTGCTTGCCT TGCACGGGCAAAACGATCAGCTGCGGTTGGTGCGGCCTGAGGAGCAACGCGCTGCGCTAGACCGTTACGCGGCTGCAGGC CCCAGTTGTGAGCGCTACCGCGAGCTGCGTGATGCCTGGTTGTTGGCGCGGAGCGATCTCATAGATCGCCGCAATCGGAT TCGGGAACTTGTCCAGGAGGCGGATCGGCTGAAATTCGCGCTGAGCGAGATCGATAGCGTTGACCCGCAACCGGGCGAGG ACAACGCGTTGGTCGCTGACATCGTTCGGCTCTCCGAACTGGACATGCTGCGTGAAGTCGCGGTTAATGCGCGCGCGGCG TTATCCGGGGCGCTTGACGATATGGACGTGTCAGGCTCGAATGCTGTTGCTTGTATGGGACAGGCGAAGGCTGCGTTGGA ATCGACCGATGACGCAACGTTGCGGGCGTTCGCCGACCAAGTCGGCGAAGTGCTGACGGTGGTTGTCGAAGTGGGTCGCG AGCTCGGCGAGTATCTGGAGGAACTGCCGGTCGATGCTAGCGCACTAGAGTCCAAGCTGGTTCGGCAAGCCGAACTGTGC ACACTGACTCGCAAGTACGCCGCGGATATCGATGGCGTGTTGCAGTGGGCAAGGGAGTCACGCGAACGGCTGGAGCAACT TGACGTCTCCTATGAAAGGTTGGCCGGCGTTGAATCTCGTGTCGATGAGTTGGAACGCCAATTATCGCAAGCCGCAGTCG ATCTCAGCAAGCTTCGACGCGATGCAGCCAATAGACTGGCCAAAGAGGTGACCGCGGAGCTGTCTGCCTTGGCGATGGTC GATGCGGAATTCACCATTAGCGTGACTACCGATCTCATACCTTTGACCGACTATAAGCGCTCCGCTGCCGTCACGCTGCC CTCGGGCGGAGTGGCCCGAGCCGGCGCTGATGGTGTCGACCAGGTCGAGTTTGGCTTTGCTGCGCACCGCGGTATGACGG TGCTGCCGCTGGCGAAAAGCGCCTCTGGCGGTGAGCTATCTCGGGTGATGCTCGCTCTAGAGGTAGTGTTAGCTACTTCG GCGGCGGGTACCACGATGGTGTTCGATGAGGTTGATGTCGGCGTCGGCGGCAGGGCCGCAGTGCAGATCGGGCGTAGGTT GGCGCGGTTGGCCCGTACCCACCAGGTCATTGTGGTGACGCATTTGCCACAGGTTGCCGCCTATGCTGATGTCCATCTGG TGGTGCACAGTGCCGGGCTTGACGGCGCCAGCGACGTGCGTCGTCTGGCCGGCGACGATAGGGTGGCCGAGTTGGCGCGG ATGCTGGCGGGGCTCGGTGAGTCTGATAGTGGCCGCGCGCACGCCCGTGAACTGCTCGATGCCGCGCGGAAAGATAAGAG CTAA
Upstream 100 bases:
>100_bases GCCTAGATAGCGCGCCGTTCACTGACCGCTTGGTGAGCAAATTCCGGTTGCCGGTGACCGGTTGGCGCGGGAAGTGATGG CGTTGCCTGGTGCGCACTGA
Downstream 100 bases:
>100_bases TTTGGTCCGCGCTGCTGCGAGCGATCGTGTCCGTACCCCGACACGCCGCAAAACCTGTACATCTGCGGACGTTTGTGCGA TCAAATCGTTACTATCTTGT
Product: recombination and DNA repair
Products: NA
Alternate protein names: Recombination protein N
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MLTEIRIESLGAISVATAEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADASRVRSGANRAVVEGRFTTTDLDDVVVAQ LDGILNASGSERDEDGSVIVLRSVSRDGPSRSYLGGRSVPAKSLGSFTTELLALHGQNDQLRLVRPEEQRAALDRYAAAG PSCERYRELRDAWLLARSDLIDRRNRIRELVQEADRLKFALSEIDSVDPQPGEDNALVADIVRLSELDMLREVAVNARAA LSGALDDMDVSGSNAVACMGQAKAALESTDDATLRAFADQVGEVLTVVVEVGRELGEYLEELPVDASALESKLVRQAELC TLTRKYAADIDGVLQWARESRERLEQLDVSYERLAGVESRVDELERQLSQAAVDLSKLRRDAANRLAKEVTAELSALAMV DAEFTISVTTDLIPLTDYKRSAAVTLPSGGVARAGADGVDQVEFGFAAHRGMTVLPLAKSASGGELSRVMLALEVVLATS AAGTTMVFDEVDVGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVHSAGLDGASDVRRLAGDDRVAELAR MLAGLGESDSGRAHARELLDAARKDKS
Sequences:
>Translated_587_residues MLTEIRIESLGAISVATAEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADASRVRSGANRAVVEGRFTTTDLDDVVVAQ LDGILNASGSERDEDGSVIVLRSVSRDGPSRSYLGGRSVPAKSLGSFTTELLALHGQNDQLRLVRPEEQRAALDRYAAAG PSCERYRELRDAWLLARSDLIDRRNRIRELVQEADRLKFALSEIDSVDPQPGEDNALVADIVRLSELDMLREVAVNARAA LSGALDDMDVSGSNAVACMGQAKAALESTDDATLRAFADQVGEVLTVVVEVGRELGEYLEELPVDASALESKLVRQAELC TLTRKYAADIDGVLQWARESRERLEQLDVSYERLAGVESRVDELERQLSQAAVDLSKLRRDAANRLAKEVTAELSALAMV DAEFTISVTTDLIPLTDYKRSAAVTLPSGGVARAGADGVDQVEFGFAAHRGMTVLPLAKSASGGELSRVMLALEVVLATS AAGTTMVFDEVDVGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVHSAGLDGASDVRRLAGDDRVAELAR MLAGLGESDSGRAHARELLDAARKDKS >Mature_587_residues MLTEIRIESLGAISVATAEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADASRVRSGANRAVVEGRFTTTDLDDVVVAQ LDGILNASGSERDEDGSVIVLRSVSRDGPSRSYLGGRSVPAKSLGSFTTELLALHGQNDQLRLVRPEEQRAALDRYAAAG PSCERYRELRDAWLLARSDLIDRRNRIRELVQEADRLKFALSEIDSVDPQPGEDNALVADIVRLSELDMLREVAVNARAA LSGALDDMDVSGSNAVACMGQAKAALESTDDATLRAFADQVGEVLTVVVEVGRELGEYLEELPVDASALESKLVRQAELC TLTRKYAADIDGVLQWARESRERLEQLDVSYERLAGVESRVDELERQLSQAAVDLSKLRRDAANRLAKEVTAELSALAMV DAEFTISVTTDLIPLTDYKRSAAVTLPSGGVARAGADGVDQVEFGFAAHRGMTVLPLAKSASGGELSRVMLALEVVLATS AAGTTMVFDEVDVGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVHSAGLDGASDVRRLAGDDRVAELAR MLAGLGESDSGRAHARELLDAARKDKS
Specific function: May be involved in recombinational repair of damaged DNA
COG id: COG0497
COG function: function code L; ATPase involved in DNA repair
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recN family
Homologues:
Organism=Escherichia coli, GI48994901, Length=585, Percent_Identity=31.6239316239316, Blast_Score=239, Evalue=4e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RECN_MYCLE (Q49896)
Other databases:
- EMBL: U00021 - EMBL: Z95117 - EMBL: AL583921 - PIR: S72966 - RefSeq: NP_301970.1 - ProteinModelPortal: Q49896 - EnsemblBacteria: EBMYCT00000028919 - GeneID: 910489 - GenomeReviews: AL450380_GR - KEGG: mle:ML1360 - NMPDR: fig|272631.1.peg.842 - Leproma: ML1360 - GeneTree: EBGT00050000014993 - HOGENOM: HBG632212 - OMA: GEMSRFL - ProtClustDB: CLSK791332 - BioCyc: MLEP272631:ML1360-MONOMER - GO: GO:0005694 - InterPro: IPR004604 - InterPro: IPR003395 - TIGRFAMs: TIGR00634
Pfam domain/function: PF02463 SMC_N
EC number: NA
Molecular weight: Translated: 62724; Mature: 62724
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTEIRIESLGAISVATAEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADASRVRSGAN CCCEEEHHCCCCEEEEHHHHHCCEEEEECCCCCCCEEEEEHHHHHCCCCCCHHHHHCCCC RAVVEGRFTTTDLDDVVVAQLDGILNASGSERDEDGSVIVLRSVSRDGPSRSYLGGRSVP CEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC AKSLGSFTTELLALHGQNDQLRLVRPEEQRAALDRYAAAGPSCERYRELRDAWLLARSDL HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IDRRNRIRELVQEADRLKFALSEIDSVDPQPGEDNALVADIVRLSELDMLREVAVNARAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSGALDDMDVSGSNAVACMGQAKAALESTDDATLRAFADQVGEVLTVVVEVGRELGEYLE HHCCCCCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELPVDASALESKLVRQAELCTLTRKYAADIDGVLQWARESRERLEQLDVSYERLAGVESR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHH VDELERQLSQAAVDLSKLRRDAANRLAKEVTAELSALAMVDAEFTISVTTDLIPLTDYKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECEEECCCCCC SAAVTLPSGGVARAGADGVDQVEFGFAAHRGMTVLPLAKSASGGELSRVMLALEVVLATS CCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC AAGTTMVFDEVDVGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVHSAGL CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHEEEEEEECCC DGASDVRRLAGDDRVAELARMLAGLGESDSGRAHARELLDAARKDKS CCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MLTEIRIESLGAISVATAEFDRGLTVLTGETGTGKTMVVTGLHLLGGARADASRVRSGAN CCCEEEHHCCCCEEEEHHHHHCCEEEEECCCCCCCEEEEEHHHHHCCCCCCHHHHHCCCC RAVVEGRFTTTDLDDVVVAQLDGILNASGSERDEDGSVIVLRSVSRDGPSRSYLGGRSVP CEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC AKSLGSFTTELLALHGQNDQLRLVRPEEQRAALDRYAAAGPSCERYRELRDAWLLARSDL HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IDRRNRIRELVQEADRLKFALSEIDSVDPQPGEDNALVADIVRLSELDMLREVAVNARAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSGALDDMDVSGSNAVACMGQAKAALESTDDATLRAFADQVGEVLTVVVEVGRELGEYLE HHCCCCCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELPVDASALESKLVRQAELCTLTRKYAADIDGVLQWARESRERLEQLDVSYERLAGVESR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHH VDELERQLSQAAVDLSKLRRDAANRLAKEVTAELSALAMVDAEFTISVTTDLIPLTDYKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECEEECCCCCC SAAVTLPSGGVARAGADGVDQVEFGFAAHRGMTVLPLAKSASGGELSRVMLALEVVLATS CCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC AAGTTMVFDEVDVGVGGRAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLVVHSAGL CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHEEEEEEECCC DGASDVRRLAGDDRVAELARMLAGLGESDSGRAHARELLDAARKDKS CCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002