| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is tatC
Identifier: 221230170
GI number: 221230170
Start: 1583633
End: 1584493
Strand: Direct
Name: tatC
Synonym: MLBr_01332
Alternate gene names: 221230170
Gene position: 1583633-1584493 (Clockwise)
Preceding gene: 221230169
Following gene: 221230171
Centisome position: 48.46
GC content: 55.98
Gene sequence:
>861_bases ATGTCTCTGATCGACCACCTGACTGAGTTGCGAACCCGGCTACTGATCTCGTTGGCCGCGATTGTGGTCACCACGATTTT CGGGTTCATCTGGTACTCTCATTCCATCTTCGGGTTGGAGAGTCTCGGCGAGTGGTTACGGCGTCCGTACTGTTCGCTGC CGCAATCGGCACGTGCGGATATCAGCCCCGACGGGCAGTGTCGATTGTTGGCCACAGCGCCGTTCGATCAATTCATGCTG CGAATCAAGGTTGGGATGGCCGCCGGGATCGTGCTGGCCTCCCCAGTGTGGTTTTACCAGCTCTGGGCGTTCATCACGCC AGGGCTCTACACGAAGGAACGCCGCTTCACGGTGGCTTTCGTGGTTCCAGCCGCGGTGCTGTTCGCCGGCGGTACTGTAC TAGCATATTTGGTGTTATCCAAAGCGTTGGGTTTCTTGCTGATTGTCGGTAGCGGCGTGCAAGTGACCGCGCTTTCTGGT GACCGGTATTTCGGTTTTTTGTTGAACCTTCTGGTAGTTTTCGGGGTCAGCTTTGAGTTCCCGCTGTTGATCGTCATGCT CAACATCGCTGGTCTTCTGACCTATCAGCGGCTGAAGTCTTGGCGTCGTGGTCTAATATTCGCAATGTTTGTGTTCGCGG CGGTATTTACGCCCGGATCTGACCCATTTTCGATGACAGCGCTTGGCGCCGCTCTGACCGTGCTGCTCGAGCTTGCCATC CAGCTAGTTCGGCTGCACGACAAGCGCAGAGTCAAGCATGAAGCCTTAATCGCCGACGATGAAGCGTCTGTCATCGAGCC ACCCTCGTCGATACCGGAGCGGTCGTATACCGCTACTAGGTCTCATGACGATGTCACATAA
Upstream 100 bases:
>100_bases AAACGTCGTGAACGGTTGCAGGGCTGTAGTGCGTGCCTGTGATCTACTCAAAAGAATCAAGCAGCATTACAGGCGCAGTC GCACCAATCCAGATGCGACG
Downstream 100 bases:
>100_bases AGGTCCGCGCCGCGCGGCGGCAGCATGACTGACCTGGCCGAGCTGGCCCGGTTCACCGCGGAATTGCCCTTCTCGCTCGA CGACTTTCAGCAACGGGCGT
Product: membrane transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSLIDHLTELRTRLLISLAAIVVTTIFGFIWYSHSIFGLESLGEWLRRPYCSLPQSARADISPDGQCRLLATAPFDQFML RIKVGMAAGIVLASPVWFYQLWAFITPGLYTKERRFTVAFVVPAAVLFAGGTVLAYLVLSKALGFLLIVGSGVQVTALSG DRYFGFLLNLLVVFGVSFEFPLLIVMLNIAGLLTYQRLKSWRRGLIFAMFVFAAVFTPGSDPFSMTALGAALTVLLELAI QLVRLHDKRRVKHEALIADDEASVIEPPSSIPERSYTATRSHDDVT
Sequences:
>Translated_286_residues MSLIDHLTELRTRLLISLAAIVVTTIFGFIWYSHSIFGLESLGEWLRRPYCSLPQSARADISPDGQCRLLATAPFDQFML RIKVGMAAGIVLASPVWFYQLWAFITPGLYTKERRFTVAFVVPAAVLFAGGTVLAYLVLSKALGFLLIVGSGVQVTALSG DRYFGFLLNLLVVFGVSFEFPLLIVMLNIAGLLTYQRLKSWRRGLIFAMFVFAAVFTPGSDPFSMTALGAALTVLLELAI QLVRLHDKRRVKHEALIADDEASVIEPPSSIPERSYTATRSHDDVT >Mature_285_residues SLIDHLTELRTRLLISLAAIVVTTIFGFIWYSHSIFGLESLGEWLRRPYCSLPQSARADISPDGQCRLLATAPFDQFMLR IKVGMAAGIVLASPVWFYQLWAFITPGLYTKERRFTVAFVVPAAVLFAGGTVLAYLVLSKALGFLLIVGSGVQVTALSGD RYFGFLLNLLVVFGVSFEFPLLIVMLNIAGLLTYQRLKSWRRGLIFAMFVFAAVFTPGSDPFSMTALGAALTVLLELAIQ LVRLHDKRRVKHEALIADDEASVIEPPSSIPERSYTATRSHDDVT
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family
Homologues:
Organism=Escherichia coli, GI2367313, Length=267, Percent_Identity=32.9588014981273, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATC_MYCLE (P54078)
Other databases:
- EMBL: U00017 - EMBL: AL035310 - EMBL: AL583921 - PIR: F87075 - PIR: S72851 - RefSeq: NP_301956.1 - EnsemblBacteria: EBMYCT00000029400 - GeneID: 910452 - GenomeReviews: AL450380_GR - KEGG: mle:ML1332 - NMPDR: fig|272631.1.peg.828 - Leproma: ML1332 - GeneTree: EBGT00050000016575 - HOGENOM: HBG733232 - ProtClustDB: CLSK2751554 - BioCyc: MLEP272631:ML1332-MONOMER - InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 - PRINTS: PR01840 - TIGRFAMs: TIGR00945
Pfam domain/function: PF00902 TatC
EC number: NA
Molecular weight: Translated: 31624; Mature: 31492
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x298e5670)-; HASH(0x2a11b3bc)-; HASH(0x29819550)-; HASH(0x2a0b8ae8)-; HASH(0x2a16fa7c)-; HASH(0x299ccdf0)-; HASH(0x2a0e68c8)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIDHLTELRTRLLISLAAIVVTTIFGFIWYSHSIFGLESLGEWLRRPYCSLPQSARAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ISPDGQCRLLATAPFDQFMLRIKVGMAAGIVLASPVWFYQLWAFITPGLYTKERRFTVAF CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEHH VVPAAVLFAGGTVLAYLVLSKALGFLLIVGSGVQVTALSGDRYFGFLLNLLVVFGVSFEF HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCHH PLLIVMLNIAGLLTYQRLKSWRRGLIFAMFVFAAVFTPGSDPFSMTALGAALTVLLELAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QLVRLHDKRRVKHEALIADDEASVIEPPSSIPERSYTATRSHDDVT HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure SLIDHLTELRTRLLISLAAIVVTTIFGFIWYSHSIFGLESLGEWLRRPYCSLPQSARAD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ISPDGQCRLLATAPFDQFMLRIKVGMAAGIVLASPVWFYQLWAFITPGLYTKERRFTVAF CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEHH VVPAAVLFAGGTVLAYLVLSKALGFLLIVGSGVQVTALSGDRYFGFLLNLLVVFGVSFEF HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCHH PLLIVMLNIAGLLTYQRLKSWRRGLIFAMFVFAAVFTPGSDPFSMTALGAALTVLLELAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QLVRLHDKRRVKHEALIADDEASVIEPPSSIPERSYTATRSHDDVT HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002