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The map label for this gene is ycjO [C]

Identifier: 221230009

GI number: 221230009

Start: 1249800

End: 1250714

Strand: Direct

Name: ycjO [C]

Synonym: MLBr_01087

Alternate gene names: 221230009

Gene position: 1249800-1250714 (Clockwise)

Preceding gene: 221230008

Following gene: 221230010

Centisome position: 38.24

GC content: 56.28

Gene sequence:

>915_bases
ATGACAGCGGTGGTCGGCAAGTCGTGGCACGTGCGCGCCAGCAGTGTGCAGCCAGAACAGCGACTGGCGTTTCTTCTGGT
TACGCCCGCGGCGATGTTGATGCTGGTGGTGACGGCCTATCCTATCGGATACGCGGTCTGGCTGAGTCTGCAACGTTACA
GCTTGGCGACCCCGAACGAGACTGTGTTTATCGGTTTAGGCAACTACCAAACAATCTTGACCGACCCGTATTGGTGGACG
GCACTTGCGGTGACTTTGGCGATCACTGTGGTTTCAGTGTCGATCGAATTCATTCTGGGCCTGATGCTGGCGCTGGTGAT
GCACCGCACCCTCCTCGGCAAGAGCCTGGTGCGCATCGCGGTGCTCATCCCTTACAGCATCGTCACGGTGGTCGCGTCAT
ACAGTTGGTATTATGCCTGGACGCCGGGCACCGGATATTTGGCGAGCCTGCTGCCCCAAGGTAGTGTGCCGTTGACCGAA
CAGATCCCGTCTTTGAGCATAGTTATCATCGTGGAGGTCTGGAAGACTACCCCGTTCATGTCGTTGTTGTTACTGGTCGG
GTTGGCACTGGTTCCTGAGGATTTGCTTAAAGCTGCGCAGATGGATGGCGCTGGTGCGTGGCGGCGGCTGACCAAGATCA
TCTTGCCGATCATTAAGCCGGCGGTCATGGTGGCGTTGTTATTCCGGACGTTGGACGCGTTCCGCATTTTCGACAACATC
TATGTGTTGACCCGAGGCGTCAACAACACCGATTCGGTATCGATCCTGGGCTACGACAACCTGTTTAAAGGATTCAACGT
GGGGCTTGGCTCGGCTATCAGTGTGCTGATCTTCGGCTGCGTAGCTCTAATCGCGGTGATTTTCATCAAGGTGTTCGGTG
TCGTGGCGCCCGGAGGTGACAGCAATGGGTATTGA

Upstream 100 bases:

>100_bases
CCGGAGCCCATGGCCGACCGGCTCGCTGCGCAGGTGCAAAAGGCTATCGACGGGAAGGGCTTGTTGCCGTGACCGTCTGC
TTGTGGGGAGAGCAGCGGCT

Downstream 100 bases:

>100_bases
AAAAGTAAAAGTAACGGCAGGGGTTCGGGTGGGTGCGCGGCGCGCCACGATTTGGGTAATCATCGACACCTTCGTGGTGG
GATATGCGTTATTGCCAGTG

Product: putative ABC-transport protein, inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTAVVGKSWHVRASSVQPEQRLAFLLVTPAAMLMLVVTAYPIGYAVWLSLQRYSLATPNETVFIGLGNYQTILTDPYWWT
ALAVTLAITVVSVSIEFILGLMLALVMHRTLLGKSLVRIAVLIPYSIVTVVASYSWYYAWTPGTGYLASLLPQGSVPLTE
QIPSLSIVIIVEVWKTTPFMSLLLLVGLALVPEDLLKAAQMDGAGAWRRLTKIILPIIKPAVMVALLFRTLDAFRIFDNI
YVLTRGVNNTDSVSILGYDNLFKGFNVGLGSAISVLIFGCVALIAVIFIKVFGVVAPGGDSNGY

Sequences:

>Translated_304_residues
MTAVVGKSWHVRASSVQPEQRLAFLLVTPAAMLMLVVTAYPIGYAVWLSLQRYSLATPNETVFIGLGNYQTILTDPYWWT
ALAVTLAITVVSVSIEFILGLMLALVMHRTLLGKSLVRIAVLIPYSIVTVVASYSWYYAWTPGTGYLASLLPQGSVPLTE
QIPSLSIVIIVEVWKTTPFMSLLLLVGLALVPEDLLKAAQMDGAGAWRRLTKIILPIIKPAVMVALLFRTLDAFRIFDNI
YVLTRGVNNTDSVSILGYDNLFKGFNVGLGSAISVLIFGCVALIAVIFIKVFGVVAPGGDSNGY
>Mature_303_residues
TAVVGKSWHVRASSVQPEQRLAFLLVTPAAMLMLVVTAYPIGYAVWLSLQRYSLATPNETVFIGLGNYQTILTDPYWWTA
LAVTLAITVVSVSIEFILGLMLALVMHRTLLGKSLVRIAVLIPYSIVTVVASYSWYYAWTPGTGYLASLLPQGSVPLTEQ
IPSLSIVIIVEVWKTTPFMSLLLLVGLALVPEDLLKAAQMDGAGAWRRLTKIILPIIKPAVMVALLFRTLDAFRIFDNIY
VLTRGVNNTDSVSILGYDNLFKGFNVGLGSAISVLIFGCVALIAVIFIKVFGVVAPGGDSNGY

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=248, Percent_Identity=29.4354838709677, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1789861, Length=290, Percent_Identity=27.5862068965517, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1790465, Length=263, Percent_Identity=27.3764258555133, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33045; Mature: 32914

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVVGKSWHVRASSVQPEQRLAFLLVTPAAMLMLVVTAYPIGYAVWLSLQRYSLATPNE
CCCEECCCEEEEECCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TVFIGLGNYQTILTDPYWWTALAVTLAITVVSVSIEFILGLMLALVMHRTLLGKSLVRIA
EEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIPYSIVTVVASYSWYYAWTPGTGYLASLLPQGSVPLTEQIPSLSIVIIVEVWKTTPFM
HHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCHHHCCCCEEEEEEEEECCCCHHH
SLLLLVGLALVPEDLLKAAQMDGAGAWRRLTKIILPIIKPAVMVALLFRTLDAFRIFDNI
HHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVLTRGVNNTDSVSILGYDNLFKGFNVGLGSAISVLIFGCVALIAVIFIKVFGVVAPGGD
EEEEECCCCCCCEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SNGY
CCCC
>Mature Secondary Structure 
TAVVGKSWHVRASSVQPEQRLAFLLVTPAAMLMLVVTAYPIGYAVWLSLQRYSLATPNE
CCEECCCEEEEECCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TVFIGLGNYQTILTDPYWWTALAVTLAITVVSVSIEFILGLMLALVMHRTLLGKSLVRIA
EEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIPYSIVTVVASYSWYYAWTPGTGYLASLLPQGSVPLTEQIPSLSIVIIVEVWKTTPFM
HHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCHHHCCCCEEEEEEEEECCCCHHH
SLLLLVGLALVPEDLLKAAQMDGAGAWRRLTKIILPIIKPAVMVALLFRTLDAFRIFDNI
HHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVLTRGVNNTDSVSILGYDNLFKGFNVGLGSAISVLIFGCVALIAVIFIKVFGVVAPGGD
EEEEECCCCCCCEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SNGY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]