Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220918787
Identifier: 220918787
GI number: 220918787
Start: 4118927
End: 4120171
Strand: Direct
Name: 220918787
Synonym: A2cp1_3699
Alternate gene names: NA
Gene position: 4118927-4120171 (Clockwise)
Preceding gene: 220918786
Following gene: 220918788
Centisome position: 81.9
GC content: 66.02
Gene sequence:
>1245_bases GTGCGGACGGGTGACGCGAGAAGTGCCGTCGAAACCAGCCTAGACGGCGATGCGGGGGTCAGCGTCATCGCCTCCGGAAT CGACACTCTGTACCTGTTCTCGCACGCCCCCGTCTTTCGCACAGAGTTCAGGCGCCTCGAGGACGCACAGCAGCTGGCCC GAGCCAACCCGAACCGCCTGGCGAAGGGTCCCACCCTCGACATCGCGGGACACTACTTCGCGATGAACCGCCATGGCGCC CGCACTGCGCCCTATCTGCTGGACAGCGAGCACGCGACCCTGCTGGTGAATCCACACGCGGCATCGACGTTCCCGACGTT CACCGCCGAGCTGCGAGCCATCTACCTCTGGCAGAAGGGCGCACGATTCGTCGCCGAGCAGGCCGAGGAGATCGCCAGCC AACTGCTCGTTCGCATGACACCCGAGGACGCGCGACTGCACGTCGGGCGTGTGGACCTGGCCGTCGACTTCCAGGGATGG CAACCACGCGAGGGCGATGGGCCAGAGTTCGTCACCCGGGCGCACGACCGCACGTCGCATGTTCAGCGGAAGGTCTTCAC CGGCTTCATGTTCGGGCACGGCGACGTCGCAGGGCGGCTGTACTGCAAGAGCATCGAAATCGAGCGAAGCCAGAAGAAAT GGTTCCGGAACATCTGGGCCGCGTCCAAGGCTTACGATCCAAAGCGTCCAGTCTGGCGACTCGAATTCCAGCTCCGCAGG CCCGCCATCGTGAGCATGGAGCTCGATGGCGAGCACGGGCCGCTCGATACCTGGGAGGACGTGCTCGAAAGTTCGGGCGC CCTCTGGCGGTATCTCACCCGCAAATGGCTGGCGCTGAAGCACCGCACGAAGCAGTCGCGGCAGAACTTCCACCCGGCGT GGGATGCTCTCGCGCGGCTCGGATTCAGCACGGGACCGTGGGAAGGCACGGAGGCGGACCTGTACCGCATCCACCGCCAG GACAGCGCGGAGCGTGCCACCGGGCAGATCGCCGGATATCTCGCGCGCGGCCTTGCCGAGCACATGTTCCATGAGTCGAC GGACGAGCTCGTACAACCGAGCCTGGACGACGCGCTGCCTGCCATCGTGGAACGGGTGCGCCTGCACACCAAGCGTCGTG GCCGCTCCGTGGAGGAGCGCGCGCAGGAGCGTGTGGCGAGCTGGCTCGCGACCGCTGAGTCCATGACCATGAACGAGTCG CTCAGGATGCGTGAACCCGGCGACGACGACGGGGACGAAACATGA
Upstream 100 bases:
>100_bases CCGTACTCTCCACGTTCGTTCGCCTGTGGTCGCGGTGTGTAACACGCGACCCGATACCGTCACCGCTACGGAGGCAAGCT CCCAAGAACTCAAGGCACCT
Downstream 100 bases:
>100_bases CGACGCGCACGTATCGGGGCACACGTGCCGGAGACCGACTGTGACCGGCCCCACCCCGCCCCTGACTGAATGGCTCACGG CTGACGAAGCGACTGCGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MRTGDARSAVETSLDGDAGVSVIASGIDTLYLFSHAPVFRTEFRRLEDAQQLARANPNRLAKGPTLDIAGHYFAMNRHGA RTAPYLLDSEHATLLVNPHAASTFPTFTAELRAIYLWQKGARFVAEQAEEIASQLLVRMTPEDARLHVGRVDLAVDFQGW QPREGDGPEFVTRAHDRTSHVQRKVFTGFMFGHGDVAGRLYCKSIEIERSQKKWFRNIWAASKAYDPKRPVWRLEFQLRR PAIVSMELDGEHGPLDTWEDVLESSGALWRYLTRKWLALKHRTKQSRQNFHPAWDALARLGFSTGPWEGTEADLYRIHRQ DSAERATGQIAGYLARGLAEHMFHESTDELVQPSLDDALPAIVERVRLHTKRRGRSVEERAQERVASWLATAESMTMNES LRMREPGDDDGDET
Sequences:
>Translated_414_residues MRTGDARSAVETSLDGDAGVSVIASGIDTLYLFSHAPVFRTEFRRLEDAQQLARANPNRLAKGPTLDIAGHYFAMNRHGA RTAPYLLDSEHATLLVNPHAASTFPTFTAELRAIYLWQKGARFVAEQAEEIASQLLVRMTPEDARLHVGRVDLAVDFQGW QPREGDGPEFVTRAHDRTSHVQRKVFTGFMFGHGDVAGRLYCKSIEIERSQKKWFRNIWAASKAYDPKRPVWRLEFQLRR PAIVSMELDGEHGPLDTWEDVLESSGALWRYLTRKWLALKHRTKQSRQNFHPAWDALARLGFSTGPWEGTEADLYRIHRQ DSAERATGQIAGYLARGLAEHMFHESTDELVQPSLDDALPAIVERVRLHTKRRGRSVEERAQERVASWLATAESMTMNES LRMREPGDDDGDET >Mature_414_residues MRTGDARSAVETSLDGDAGVSVIASGIDTLYLFSHAPVFRTEFRRLEDAQQLARANPNRLAKGPTLDIAGHYFAMNRHGA RTAPYLLDSEHATLLVNPHAASTFPTFTAELRAIYLWQKGARFVAEQAEEIASQLLVRMTPEDARLHVGRVDLAVDFQGW QPREGDGPEFVTRAHDRTSHVQRKVFTGFMFGHGDVAGRLYCKSIEIERSQKKWFRNIWAASKAYDPKRPVWRLEFQLRR PAIVSMELDGEHGPLDTWEDVLESSGALWRYLTRKWLALKHRTKQSRQNFHPAWDALARLGFSTGPWEGTEADLYRIHRQ DSAERATGQIAGYLARGLAEHMFHESTDELVQPSLDDALPAIVERVRLHTKRRGRSVEERAQERVASWLATAESMTMNES LRMREPGDDDGDET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47000; Mature: 47000
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGDARSAVETSLDGDAGVSVIASGIDTLYLFSHAPVFRTEFRRLEDAQQLARANPNRL CCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC AKGPTLDIAGHYFAMNRHGARTAPYLLDSEHATLLVNPHAASTFPTFTAELRAIYLWQKG CCCCCEEECCCEEEECCCCCCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHEEEEHHHH ARFVAEQAEEIASQLLVRMTPEDARLHVGRVDLAVDFQGWQPREGDGPEFVTRAHDRTSH HHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH VQRKVFTGFMFGHGDVAGRLYCKSIEIERSQKKWFRNIWAASKAYDPKRPVWRLEFQLRR HHHHHHHHHEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC PAIVSMELDGEHGPLDTWEDVLESSGALWRYLTRKWLALKHRTKQSRQNFHPAWDALARL CEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC GFSTGPWEGTEADLYRIHRQDSAERATGQIAGYLARGLAEHMFHESTDELVQPSLDDALP CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHH AIVERVRLHTKRRGRSVEERAQERVASWLATAESMTMNESLRMREPGDDDGDET HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTGDARSAVETSLDGDAGVSVIASGIDTLYLFSHAPVFRTEFRRLEDAQQLARANPNRL CCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC AKGPTLDIAGHYFAMNRHGARTAPYLLDSEHATLLVNPHAASTFPTFTAELRAIYLWQKG CCCCCEEECCCEEEECCCCCCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHEEEEHHHH ARFVAEQAEEIASQLLVRMTPEDARLHVGRVDLAVDFQGWQPREGDGPEFVTRAHDRTSH HHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH VQRKVFTGFMFGHGDVAGRLYCKSIEIERSQKKWFRNIWAASKAYDPKRPVWRLEFQLRR HHHHHHHHHEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC PAIVSMELDGEHGPLDTWEDVLESSGALWRYLTRKWLALKHRTKQSRQNFHPAWDALARL CEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC GFSTGPWEGTEADLYRIHRQDSAERATGQIAGYLARGLAEHMFHESTDELVQPSLDDALP CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHH AIVERVRLHTKRRGRSVEERAQERVASWLATAESMTMNESLRMREPGDDDGDET HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA