Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220918786
Identifier: 220918786
GI number: 220918786
Start: 4117336
End: 4117821
Strand: Direct
Name: 220918786
Synonym: A2cp1_3698
Alternate gene names: NA
Gene position: 4117336-4117821 (Clockwise)
Preceding gene: 220918783
Following gene: 220918787
Centisome position: 81.87
GC content: 66.67
Gene sequence:
>486_bases ATGCCGCCGAAGCTTCCGAACGCACCTTCGCCAGGCGTGTTCCGGCCGAAGAGCGCCGAGGACTACCGCGCGCAGATCCA GGGAGGCTTCCAGGTCCGGTCCCGCAAGCACGAAGCTCTCGTCAGGATCGCAGGCGAGCTTTTGCTACGAAAGGCGACCG TCACGACGCCTCACCCGGTCGACCTCCGCATGACGAGTCCCGTTCCCGTCATCTTCGAGGCAAAGACCGTCGGAAGCCGT GGGCCGGGAGCAGCGATCCGAGAGGCTGTGGGGCAGCTCTACGAGTACCGATACTTCATCGGGCCGCGGGACGCGCGTCT GTGCGTGCTGTTGGACGACGATCCCGGCGCCGTGCTCGTCCAGTACGTCGAGGACGAGCTCGGACTGATGATCGCGTGGC TCGCGGACGGCGTACTGCGCGCAGGCCCCGTTACTTCCGATTCGCTGAGGTCGGCGGGCATCGACCTCGCGCAGCTGGCC GCTTAG
Upstream 100 bases:
>100_bases GAAGATGCCGCGCGTCTTCGTTGAGCGCTGGCCGAAGTTGGGGAAGTTGGTCGACGCTCTGGACGGCGTGCGCGCAAACC TGGAAGCGCTCGGAGAGGTG
Downstream 100 bases:
>100_bases GCTGTCGCACCTCGCGAAGCGACTTGGCGTTTCGCGCATCGTGCTCTCGGCGCAAGCGGCGGCGGCAAAGGCGACGACGA CCGCCGATGGCAGCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPPKLPNAPSPGVFRPKSAEDYRAQIQGGFQVRSRKHEALVRIAGELLLRKATVTTPHPVDLRMTSPVPVIFEAKTVGSR GPGAAIREAVGQLYEYRYFIGPRDARLCVLLDDDPGAVLVQYVEDELGLMIAWLADGVLRAGPVTSDSLRSAGIDLAQLA A
Sequences:
>Translated_161_residues MPPKLPNAPSPGVFRPKSAEDYRAQIQGGFQVRSRKHEALVRIAGELLLRKATVTTPHPVDLRMTSPVPVIFEAKTVGSR GPGAAIREAVGQLYEYRYFIGPRDARLCVLLDDDPGAVLVQYVEDELGLMIAWLADGVLRAGPVTSDSLRSAGIDLAQLA A >Mature_160_residues PPKLPNAPSPGVFRPKSAEDYRAQIQGGFQVRSRKHEALVRIAGELLLRKATVTTPHPVDLRMTSPVPVIFEAKTVGSRG PGAAIREAVGQLYEYRYFIGPRDARLCVLLDDDPGAVLVQYVEDELGLMIAWLADGVLRAGPVTSDSLRSAGIDLAQLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17402; Mature: 17271
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPKLPNAPSPGVFRPKSAEDYRAQIQGGFQVRSRKHEALVRIAGELLLRKATVTTPHPV CCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DLRMTSPVPVIFEAKTVGSRGPGAAIREAVGQLYEYRYFIGPRDARLCVLLDDDPGAVLV EEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCEEEH QYVEDELGLMIAWLADGVLRAGPVTSDSLRSAGIDLAQLAA EEHHHHHCEEHHHHHCCHHHCCCCCCHHHHHCCCCHHHHCC >Mature Secondary Structure PPKLPNAPSPGVFRPKSAEDYRAQIQGGFQVRSRKHEALVRIAGELLLRKATVTTPHPV CCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DLRMTSPVPVIFEAKTVGSRGPGAAIREAVGQLYEYRYFIGPRDARLCVLLDDDPGAVLV EEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCEEEH QYVEDELGLMIAWLADGVLRAGPVTSDSLRSAGIDLAQLAA EEHHHHHCEEHHHHHCCHHHCCCCCCHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA