| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is erpA [H]
Identifier: 220918722
GI number: 220918722
Start: 4051117
End: 4051500
Strand: Direct
Name: erpA [H]
Synonym: A2cp1_3630
Alternate gene names: 220918722
Gene position: 4051117-4051500 (Clockwise)
Preceding gene: 220918721
Following gene: 220918723
Centisome position: 80.55
GC content: 66.41
Gene sequence:
>384_bases ATGGAAGCCACCACCATCGCCGCCCCGGCCGTATCCTCCCCCGATCTGGGCATCCCGAACTTCGTCAGCCTGACCTCGAA GGCGATCGAGATGGTGAAGGACGCCATCGCGCGCGAGGGCCTCGCGGGCTACGGCATCCGCGTCGGCGTGATGGGCGGCG GCTGCGCCGGGTTCCAGTACTCGATGGACTTCGAGAAGGACCCGCGCGACGGCGACCTCTCGCTCGAGCAGGACGGCATC AAGCTCTACGTCGATCCGATGAGCTCGATGTACCTCCAGGGCGTGACCATCGACTACGTCGTGGGCCTGCAGGGCGCCGG GTTCAAGTTCAACAACCCGAACGCCCGCACCACCTGCGGCTGCGGCTCGTCCTTCTCGTACTAG
Upstream 100 bases:
>100_bases GGGTGCGCGGTCGAACCCGCGTTGAAGCGCCCCACCCTCCCTGTTAGACTCCTTGCGCCACGTCAACGAGGGTGCGCCCC TCGATGGAGAACTCGAAGAA
Downstream 100 bases:
>100_bases GCATTCGCCTCGCCGGCCCGCGTGGCCGGGCGGTGCGCGCGGGCCGGAGGGGAGACCCTTCGGCCCTTCGCGTCTGGAGG AAGCGATGCTCGTGGTCCGC
Product: iron-sulfur cluster assembly accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MEATTIAAPAVSSPDLGIPNFVSLTSKAIEMVKDAIAREGLAGYGIRVGVMGGGCAGFQYSMDFEKDPRDGDLSLEQDGI KLYVDPMSSMYLQGVTIDYVVGLQGAGFKFNNPNARTTCGCGSSFSY
Sequences:
>Translated_127_residues MEATTIAAPAVSSPDLGIPNFVSLTSKAIEMVKDAIAREGLAGYGIRVGVMGGGCAGFQYSMDFEKDPRDGDLSLEQDGI KLYVDPMSSMYLQGVTIDYVVGLQGAGFKFNNPNARTTCGCGSSFSY >Mature_127_residues MEATTIAAPAVSSPDLGIPNFVSLTSKAIEMVKDAIAREGLAGYGIRVGVMGGGCAGFQYSMDFEKDPRDGDLSLEQDGI KLYVDPMSSMYLQGVTIDYVVGLQGAGFKFNNPNARTTCGCGSSFSY
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI52426768, Length=105, Percent_Identity=34.2857142857143, Blast_Score=81, Evalue=3e-16, Organism=Homo sapiens, GI160420328, Length=82, Percent_Identity=39.0243902439024, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1786351, Length=114, Percent_Identity=46.4912280701754, Blast_Score=106, Evalue=4e-25, Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=38.0952380952381, Blast_Score=82, Evalue=1e-17, Organism=Escherichia coli, GI1787974, Length=106, Percent_Identity=39.622641509434, Blast_Score=78, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193209025, Length=105, Percent_Identity=37.1428571428571, Blast_Score=89, Evalue=5e-19, Organism=Caenorhabditis elegans, GI25146411, Length=105, Percent_Identity=37.1428571428571, Blast_Score=89, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=35.1851851851852, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323001, Length=105, Percent_Identity=32.3809523809524, Blast_Score=71, Evalue=6e-14, Organism=Drosophila melanogaster, GI24642263, Length=82, Percent_Identity=40.2439024390244, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI24649697, Length=120, Percent_Identity=35.8333333333333, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 13381; Mature: 13381
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEATTIAAPAVSSPDLGIPNFVSLTSKAIEMVKDAIAREGLAGYGIRVGVMGGGCAGFQY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEE SMDFEKDPRDGDLSLEQDGIKLYVDPMSSMYLQGVTIDYVVGLQGAGFKFNNPNARTTCG ECCCCCCCCCCCCEEECCCEEEEECCCCCCEECCCEEEEEEECCCCCEEECCCCCCEEEC CGSSFSY CCCCCCC >Mature Secondary Structure MEATTIAAPAVSSPDLGIPNFVSLTSKAIEMVKDAIAREGLAGYGIRVGVMGGGCAGFQY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEE SMDFEKDPRDGDLSLEQDGIKLYVDPMSSMYLQGVTIDYVVGLQGAGFKFNNPNARTTCG ECCCCCCCCCCCCEEECCCEEEEECCCCCCEECCCEEEEEEECCCCCEEECCCCCCEEEC CGSSFSY CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA