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The map label for this gene is 220918691

Identifier: 220918691

GI number: 220918691

Start: 4018177

End: 4018857

Strand: Direct

Name: 220918691

Synonym: A2cp1_3599

Alternate gene names: NA

Gene position: 4018177-4018857 (Clockwise)

Preceding gene: 220918690

Following gene: 220918692

Centisome position: 79.89

GC content: 75.62

Gene sequence:

>681_bases
GTGCGAGCCACGCCCATTGCGGCAAACGGCACCGTCCGTTATGGTCGGCCCTCTCCCGGCCCGTTCCCGGTCGTCCGGCC
GGTCCGCGCCCCGGAGCCCCTCGCCCGGATGACCGACCACGGACGCGCCGCACCGTTCCTCGAAGCCGGCGATCACCGGG
GAGCCGCCGAGGCGGTCCTCCGCGAGTACGGCCCGCAGCTCCTCGGCTACCTCTCCTCCATCCTCCGGAACGACGCCGAC
GCCGCCGAGGTGTTCTCCCAGTTCACCGAGGACCTCTGGCGCGGCCTCCCCGGCTTCCGCCGCGAGTGCCCCGTCCGCGT
GTGGGCCTACCGGCTCGCCTGGCACGCCGCGGCCCGCCACCTGCGCGACCCCTACCGCGGCCGGGGCCGCCGCCTCGAGA
CCCACGAGCTGTCGCGCATCGCCGACGAGGTCCGATCGTCTGCGCTGCTCGGCCGGCGCGAGGCGCGGCAGCGCGGCATC
GACCGGCTGCGCGCCCGCCTGCAGCCGGACGAGCAGACGCTCCTGGTGCTGCGGCTCGACCGGGGGCTCTCCTGGCGCGA
GGTCGCGACCGTGCTCGCCGACGAGGGCGATGCGGTGGACGAGCCGGCGCTGCGCAAGCGCTTCGAGCGGCTGAAGGAGA
AGCTCGCGCGCATGGCGCGGGAGGAGGGGCTGCTCGAGTAG

Upstream 100 bases:

>100_bases
CGCGTGCACGAGCTGTCCCGCTGAGGCGCGCCGCCCCCCCGGTCACGCCCGCGCTGCCCGCCCCTCCCTCACCGGGAACG
TCCACGCGGAGGGCCCCACC

Downstream 100 bases:

>100_bases
CGGCCGCGTCCCAATGCGCGAGGCGCCCCGCGCCATCCCCCCGGAGCTGGAGGGCGAGAGCCAGGAGCTCTCCGACCTGC
TGCTGGAGCTCGCCTCCGCG

Product: ECF subfamily RNA polymerase sigma-24 subunit

Products: NA

Alternate protein names: Sigma-; RNA Polymerase Sigma-24 Subunit

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRATPIAANGTVRYGRPSPGPFPVVRPVRAPEPLARMTDHGRAAPFLEAGDHRGAAEAVLREYGPQLLGYLSSILRNDAD
AAEVFSQFTEDLWRGLPGFRRECPVRVWAYRLAWHAAARHLRDPYRGRGRRLETHELSRIADEVRSSALLGRREARQRGI
DRLRARLQPDEQTLLVLRLDRGLSWREVATVLADEGDAVDEPALRKRFERLKEKLARMAREEGLLE

Sequences:

>Translated_226_residues
MRATPIAANGTVRYGRPSPGPFPVVRPVRAPEPLARMTDHGRAAPFLEAGDHRGAAEAVLREYGPQLLGYLSSILRNDAD
AAEVFSQFTEDLWRGLPGFRRECPVRVWAYRLAWHAAARHLRDPYRGRGRRLETHELSRIADEVRSSALLGRREARQRGI
DRLRARLQPDEQTLLVLRLDRGLSWREVATVLADEGDAVDEPALRKRFERLKEKLARMAREEGLLE
>Mature_226_residues
MRATPIAANGTVRYGRPSPGPFPVVRPVRAPEPLARMTDHGRAAPFLEAGDHRGAAEAVLREYGPQLLGYLSSILRNDAD
AAEVFSQFTEDLWRGLPGFRRECPVRVWAYRLAWHAAARHLRDPYRGRGRRLETHELSRIADEVRSSALLGRREARQRGI
DRLRARLQPDEQTLLVLRLDRGLSWREVATVLADEGDAVDEPALRKRFERLKEKLARMAREEGLLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25714; Mature: 25714

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATPIAANGTVRYGRPSPGPFPVVRPVRAPEPLARMTDHGRAAPFLEAGDHRGAAEAVL
CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCHHHHHH
REYGPQLLGYLSSILRNDADAAEVFSQFTEDLWRGLPGFRRECPVRVWAYRLAWHAAARH
HHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHH
LRDPYRGRGRRLETHELSRIADEVRSSALLGRREARQRGIDRLRARLQPDEQTLLVLRLD
HCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
RGLSWREVATVLADEGDAVDEPALRKRFERLKEKLARMAREEGLLE
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRATPIAANGTVRYGRPSPGPFPVVRPVRAPEPLARMTDHGRAAPFLEAGDHRGAAEAVL
CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCHHHHHH
REYGPQLLGYLSSILRNDADAAEVFSQFTEDLWRGLPGFRRECPVRVWAYRLAWHAAARH
HHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHH
LRDPYRGRGRRLETHELSRIADEVRSSALLGRREARQRGIDRLRARLQPDEQTLLVLRLD
HCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
RGLSWREVATVLADEGDAVDEPALRKRFERLKEKLARMAREEGLLE
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA