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The map label for this gene is petP [H]

Identifier: 220918670

GI number: 220918670

Start: 3997874

End: 3998377

Strand: Direct

Name: petP [H]

Synonym: A2cp1_3578

Alternate gene names: 220918670

Gene position: 3997874-3998377 (Clockwise)

Preceding gene: 220918668

Following gene: 220918673

Centisome position: 79.49

GC content: 77.58

Gene sequence:

>504_bases
ATGATCGACCCGACGGACCCGCTCGACGACGCGTCCCAGCTCCTGTTCTTCGCGTTCCGCAACCTCACCGCGGAGCCGGA
CCGGATCCTGGCGGAGCGCGGCCTCTCGCGCGTCCACCACCGCGTCCTGTACTTCGTGCGGCGCGACCCCGGCCTCTCGC
CCGGCGACCTGCTGCGCATCCTGCGCGTGTCGAAGCAGGCGCTGGCGCGCCCGCTGCGCGAGCTGCTCGCGCACGGGCTG
ATCGCGTCGGCGGCGGTGCCGGACGACCGCCGGCGCAGGGCGCTCACGCTCACCGCGCGCGGCGCGGCGCTGGAGCGCCG
CGTCTCCGGGGCGCAGCGGCGCCTGTTCGCGGGCGCGTTCCGGGCGGCGGGGCCGGCGGCGGCGGACGGCTGGCGCGACA
TCATGGCGACGCTCGGAGATCGGGCGACCGCGCGCGCGGCTCGCGCCGGCGCACGTAGAGGAGCTTCTCGACCCGCGCGT
GCGGCGTCCCCGTCGCGTCGGTGA

Upstream 100 bases:

>100_bases
CCATCGTGTCCTCCGCTCGCCCGGTGCTACACTGGTGCGCCGGCGCGGCTCAGGTCAATGCCGTTGACGTATTACAGCCG
CCCGGACCGTGAGCGTCAAC

Downstream 100 bases:

>100_bases
GCTCCACCGCGTAGCTCCGGTCCACCGACCGCTCCGTGCGGAGCGCCGCGCGGATCGCGTCCAGCTCGGCCTCCTCGAGC
GTGAAGCGGGCCGCCAGCGT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MIDPTDPLDDASQLLFFAFRNLTAEPDRILAERGLSRVHHRVLYFVRRDPGLSPGDLLRILRVSKQALARPLRELLAHGL
IASAAVPDDRRRRALTLTARGAALERRVSGAQRRLFAGAFRAAGPAAADGWRDIMATLGDRATARAARAGARRGASRPAR
AASPSRR

Sequences:

>Translated_167_residues
MIDPTDPLDDASQLLFFAFRNLTAEPDRILAERGLSRVHHRVLYFVRRDPGLSPGDLLRILRVSKQALARPLRELLAHGL
IASAAVPDDRRRRALTLTARGAALERRVSGAQRRLFAGAFRAAGPAAADGWRDIMATLGDRATARAARAGARRGASRPAR
AASPSRR
>Mature_167_residues
MIDPTDPLDDASQLLFFAFRNLTAEPDRILAERGLSRVHHRVLYFVRRDPGLSPGDLLRILRVSKQALARPLRELLAHGL
IASAAVPDDRRRRALTLTARGAALERRVSGAQRRLFAGAFRAAGPAAADGWRDIMATLGDRATARAARAGARRGASRPAR
AASPSRR

Specific function: Necessary for photosynthetic and respiratory growth [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18219; Mature: 18219

Theoretical pI: Translated: 12.36; Mature: 12.36

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPTDPLDDASQLLFFAFRNLTAEPDRILAERGLSRVHHRVLYFVRRDPGLSPGDLLRI
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LRVSKQALARPLRELLAHGLIASAAVPDDRRRRALTLTARGAALERRVSGAQRRLFAGAF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHH
RAAGPAAADGWRDIMATLGDRATARAARAGARRGASRPARAASPSRR
HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDPTDPLDDASQLLFFAFRNLTAEPDRILAERGLSRVHHRVLYFVRRDPGLSPGDLLRI
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LRVSKQALARPLRELLAHGLIASAAVPDDRRRRALTLTARGAALERRVSGAQRRLFAGAF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHH
RAAGPAAADGWRDIMATLGDRATARAARAGARRGASRPARAASPSRR
HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]