| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918656
Identifier: 220918656
GI number: 220918656
Start: 3982437
End: 3984350
Strand: Direct
Name: 220918656
Synonym: A2cp1_3564
Alternate gene names: NA
Gene position: 3982437-3984350 (Clockwise)
Preceding gene: 220918655
Following gene: 220918657
Centisome position: 79.18
GC content: 81.66
Gene sequence:
>1914_bases ATGAGCCCCGGTGATCGCCTGGCGCTGGACCGGCTCTGGCCGATGCTGCTCGGGCTCGCCGCCCTGGTGGCGGGCGCGCT CGCGCTGGAGGCCTGGGCCGGCCGGCGCGGCAACGAGCCGCTCCGCATCGCGGTGGCCGACGAGGCGGTCCCCGCCGGCG ACGACGAGGAGCCCTCCGGCGACGCGCCCGACGGACCGGAGGCGCCGCCCGTCTCCGAGGCGCACGCCCGCGCCCGCACC GCGGCGCGCCGCGCGCTCTACGCGGACGCGATCCCGCTCTACGAGCAGGCGCTGCGCGATCGCCCCGACGCGCCCGCGCT CGAGGCGGAGCTGGGCGCGTGGCTGCTCGCCGCCGGCCAGCCCGAGCGCGCGCTGCCGCACCTCGCCCGCGCCGACCAGC TCCACCCGGAGCCGGCCACGGCGCTCCGCCTCGGGCTGGCCCGGGCCCGCCTGGGCGATCGCGACGGCGCCGAGCGGGAC CTCCGCCGCGCGCTGGCCCAGCGGCCCTCGTCGGGCGCGGTCCGCATCGCGCTCGGCACGCTGCTGCGCCGGCGCGGCGC GATCGCCGAGGCGGTGGCGCTGCTCGAGCCCGCCGCCGCGGCGGGCTCGAACGAGGAGCGCGCGCGGGCGCTGGTGGCGC TCGGCGCCGCGCACCTCGCGGCCGGCCGCCGCGCCGAGGCGGGCCGCGCCTTCGAGCAGGCGGTGCTGTACGCGCCGGCG CGGGTCGAGATCCGCCTGGGCGTGGCCCGCGCCTGGCTCGGCGGCGACGCCGGCGACGCCGAGCGCGCGCTGTCGGTGCT GGCGCGCGCCGCCGATCTCGCGCCCGACGTGCCGGCGGTGCACGCCGCGCTCGGGCGCGCCCGCGAGCGCACCGGCGACG ACGCCGGCGCGGCCGAGGCCTACGAGCGCGCGCTCCGCCTCGACCCCTCGAACCGCTACGCGCGGCGCCGCGTGCTGCGC CTCGCGCTCGCGGCCCGCGACTTCGCGCGGGCCCGGCACGAGGCCGACCGGCTGGTGGCCGACGGGCCGGAGGTGGCGGA GCACCACTTCCTCGCCGCCCTGGTGGCGGACCGCGACGGCCGCCCGGCCGACGCGCGCCGCGCCTACCGGCGGGCCATCG AGGTCGCGAAGGGCGAGTACCCGGAGGCCTGGCTGAACCTGGGCGTGCTGGAGAAGGGCGAGGGCGACCTCGCCGCGGCC CGCGCCGCGTACCAGCGGGCGCTGGAGCTGCGGCCCGGCTACGGCGCCGCGCTCGTCAACCTGGGCAAGCTGGAGGAGGC CGCCGGCGACGCCTCGGCGGCGGAGGCCGCCTACCGGCGGGCGGTGGAGCTCGATCCGCGGCACGCGCCGGGCTGGCTCG CGCTCGGCCAGCTCCAGTCCGACGCGCGCCGCCTCGACGAGGCCGTCGCCTCGCTCCGCCGCGCGCTGGAGGCGCGCCCC GGCTACGACGCCGCCGAGCTGTCGCTGGGCGTCACCGCCGCGCGCGCCGGGCGCACCACCGAGGCCATCGCCGCCTACCG CCGCGTGCTGGCCCGCTCGCCGCGGTCGGCCACCGCCTGGTACGACCTCGGCCTGGCGCTGCTCGACGCCGGCGACCCGC GCCAGGCGGGCGACGCGTTCCGCCAGGCGGCCTCGATCGACCCGGACCACGTGCCGTCGCGGCGCAGGACGGCCGAGCTG GAGCTCGCCTCCGGGCGCGTCGCCGAGGCCCGGGCCCGCTTCGAGGAGCTGCTCGATCTCGTCCCCGGCGACGTCCCGGC GCGCGCCGCGCTCGCCGAGATCGCCGCCCGCGAGGGCGACCGCGCCGGCTGCGAGGCCCGCGCGCGGGCGCTGCTCGCCG AGGCGCCGAAGGATGCCGCCGTGGCCCCGCTCCTCGCGCGCTGCACCACCCTCGCCCCACGGGCCGCCCGCTGA
Upstream 100 bases:
>100_bases ACGTGCCTACGGGCACGCCTCCGCTGCTCGGTCCTCGTGTGCCCGGCTCGGCGACGCCATCGTGGGCCTCGCGACGGGCC CCACGCGAACGGGAGGCGCC
Downstream 100 bases:
>100_bases GCCTGCCCTCCCCCACCGGTCCCCGGAGCCCCGCATGCCACGCCCCGCCGCACTCGCCGCCCGCCTCGCCGTCGCCGCCC TGCTCGCCACCGCCGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MSPGDRLALDRLWPMLLGLAALVAGALALEAWAGRRGNEPLRIAVADEAVPAGDDEEPSGDAPDGPEAPPVSEAHARART AARRALYADAIPLYEQALRDRPDAPALEAELGAWLLAAGQPERALPHLARADQLHPEPATALRLGLARARLGDRDGAERD LRRALAQRPSSGAVRIALGTLLRRRGAIAEAVALLEPAAAAGSNEERARALVALGAAHLAAGRRAEAGRAFEQAVLYAPA RVEIRLGVARAWLGGDAGDAERALSVLARAADLAPDVPAVHAALGRARERTGDDAGAAEAYERALRLDPSNRYARRRVLR LALAARDFARARHEADRLVADGPEVAEHHFLAALVADRDGRPADARRAYRRAIEVAKGEYPEAWLNLGVLEKGEGDLAAA RAAYQRALELRPGYGAALVNLGKLEEAAGDASAAEAAYRRAVELDPRHAPGWLALGQLQSDARRLDEAVASLRRALEARP GYDAAELSLGVTAARAGRTTEAIAAYRRVLARSPRSATAWYDLGLALLDAGDPRQAGDAFRQAASIDPDHVPSRRRTAEL ELASGRVAEARARFEELLDLVPGDVPARAALAEIAAREGDRAGCEARARALLAEAPKDAAVAPLLARCTTLAPRAAR
Sequences:
>Translated_637_residues MSPGDRLALDRLWPMLLGLAALVAGALALEAWAGRRGNEPLRIAVADEAVPAGDDEEPSGDAPDGPEAPPVSEAHARART AARRALYADAIPLYEQALRDRPDAPALEAELGAWLLAAGQPERALPHLARADQLHPEPATALRLGLARARLGDRDGAERD LRRALAQRPSSGAVRIALGTLLRRRGAIAEAVALLEPAAAAGSNEERARALVALGAAHLAAGRRAEAGRAFEQAVLYAPA RVEIRLGVARAWLGGDAGDAERALSVLARAADLAPDVPAVHAALGRARERTGDDAGAAEAYERALRLDPSNRYARRRVLR LALAARDFARARHEADRLVADGPEVAEHHFLAALVADRDGRPADARRAYRRAIEVAKGEYPEAWLNLGVLEKGEGDLAAA RAAYQRALELRPGYGAALVNLGKLEEAAGDASAAEAAYRRAVELDPRHAPGWLALGQLQSDARRLDEAVASLRRALEARP GYDAAELSLGVTAARAGRTTEAIAAYRRVLARSPRSATAWYDLGLALLDAGDPRQAGDAFRQAASIDPDHVPSRRRTAEL ELASGRVAEARARFEELLDLVPGDVPARAALAEIAAREGDRAGCEARARALLAEAPKDAAVAPLLARCTTLAPRAAR >Mature_636_residues SPGDRLALDRLWPMLLGLAALVAGALALEAWAGRRGNEPLRIAVADEAVPAGDDEEPSGDAPDGPEAPPVSEAHARARTA ARRALYADAIPLYEQALRDRPDAPALEAELGAWLLAAGQPERALPHLARADQLHPEPATALRLGLARARLGDRDGAERDL RRALAQRPSSGAVRIALGTLLRRRGAIAEAVALLEPAAAAGSNEERARALVALGAAHLAAGRRAEAGRAFEQAVLYAPAR VEIRLGVARAWLGGDAGDAERALSVLARAADLAPDVPAVHAALGRARERTGDDAGAAEAYERALRLDPSNRYARRRVLRL ALAARDFARARHEADRLVADGPEVAEHHFLAALVADRDGRPADARRAYRRAIEVAKGEYPEAWLNLGVLEKGEGDLAAAR AAYQRALELRPGYGAALVNLGKLEEAAGDASAAEAAYRRAVELDPRHAPGWLALGQLQSDARRLDEAVASLRRALEARPG YDAAELSLGVTAARAGRTTEAIAAYRRVLARSPRSATAWYDLGLALLDAGDPRQAGDAFRQAASIDPDHVPSRRRTAELE LASGRVAEARARFEELLDLVPGDVPARAALAEIAAREGDRAGCEARARALLAEAPKDAAVAPLLARCTTLAPRAAR
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32307148, Length=470, Percent_Identity=25.9574468085106, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI32307150, Length=470, Percent_Identity=25.9574468085106, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI118766330, Length=246, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI118766328, Length=246, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI83415184, Length=281, Percent_Identity=26.6903914590747, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI301336134, Length=279, Percent_Identity=26.1648745519713, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI224809432, Length=348, Percent_Identity=22.1264367816092, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI7662078, Length=283, Percent_Identity=26.1484098939929, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115532692, Length=418, Percent_Identity=25.1196172248804, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI115532690, Length=418, Percent_Identity=25.1196172248804, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI25147174, Length=235, Percent_Identity=28.936170212766, Blast_Score=96, Evalue=7e-20, Organism=Drosophila melanogaster, GI17647755, Length=251, Percent_Identity=30.6772908366534, Blast_Score=103, Evalue=4e-22, Organism=Drosophila melanogaster, GI24585827, Length=251, Percent_Identity=30.6772908366534, Blast_Score=103, Evalue=4e-22, Organism=Drosophila melanogaster, GI24585829, Length=251, Percent_Identity=30.6772908366534, Blast_Score=103, Evalue=4e-22, Organism=Drosophila melanogaster, GI24647123, Length=241, Percent_Identity=28.2157676348548, Blast_Score=82, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67412; Mature: 67280
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPGDRLALDRLWPMLLGLAALVAGALALEAWAGRRGNEPLRIAVADEAVPAGDDEEPSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC DAPDGPEAPPVSEAHARARTAARRALYADAIPLYEQALRDRPDAPALEAELGAWLLAAGQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHEEECCC PERALPHLARADQLHPEPATALRLGLARARLGDRDGAERDLRRALAQRPSSGAVRIALGT CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH LLRRRGAIAEAVALLEPAAAAGSNEERARALVALGAAHLAAGRRAEAGRAFEQAVLYAPA HHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC RVEIRLGVARAWLGGDAGDAERALSVLARAADLAPDVPAVHAALGRARERTGDDAGAAEA EEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHH YERALRLDPSNRYARRRVLRLALAARDFARARHEADRLVADGPEVAEHHFLAALVADRDG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC RPADARRAYRRAIEVAKGEYPEAWLNLGVLEKGEGDLAAARAAYQRALELRPGYGAALVN CCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH LGKLEEAAGDASAAEAAYRRAVELDPRHAPGWLALGQLQSDARRLDEAVASLRRALEARP HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GYDAAELSLGVTAARAGRTTEAIAAYRRVLARSPRSATAWYDLGLALLDAGDPRQAGDAF CCCHHHHHHCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCHHHHHHH RQAASIDPDHVPSRRRTAELELASGRVAEARARFEELLDLVPGDVPARAALAEIAAREGD HHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC RAGCEARARALLAEAPKDAAVAPLLARCTTLAPRAAR CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SPGDRLALDRLWPMLLGLAALVAGALALEAWAGRRGNEPLRIAVADEAVPAGDDEEPSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC DAPDGPEAPPVSEAHARARTAARRALYADAIPLYEQALRDRPDAPALEAELGAWLLAAGQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHEEECCC PERALPHLARADQLHPEPATALRLGLARARLGDRDGAERDLRRALAQRPSSGAVRIALGT CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHH LLRRRGAIAEAVALLEPAAAAGSNEERARALVALGAAHLAAGRRAEAGRAFEQAVLYAPA HHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC RVEIRLGVARAWLGGDAGDAERALSVLARAADLAPDVPAVHAALGRARERTGDDAGAAEA EEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHH YERALRLDPSNRYARRRVLRLALAARDFARARHEADRLVADGPEVAEHHFLAALVADRDG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC RPADARRAYRRAIEVAKGEYPEAWLNLGVLEKGEGDLAAARAAYQRALELRPGYGAALVN CCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH LGKLEEAAGDASAAEAAYRRAVELDPRHAPGWLALGQLQSDARRLDEAVASLRRALEARP HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GYDAAELSLGVTAARAGRTTEAIAAYRRVLARSPRSATAWYDLGLALLDAGDPRQAGDAF CCCHHHHHHCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCHHHHHHH RQAASIDPDHVPSRRRTAELELASGRVAEARARFEELLDLVPGDVPARAALAEIAAREGD HHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC RAGCEARARALLAEAPKDAAVAPLLARCTTLAPRAAR CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA