| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918639
Identifier: 220918639
GI number: 220918639
Start: 3965617
End: 3966078
Strand: Direct
Name: 220918639
Synonym: A2cp1_3547
Alternate gene names: NA
Gene position: 3965617-3966078 (Clockwise)
Preceding gene: 220918638
Following gene: 220918642
Centisome position: 78.85
GC content: 74.89
Gene sequence:
>462_bases ATGTCCGACGATCCCCGCGCCACCGCCACCCTGCTCGCCCGCTTCCGCACCGCCCTGCTCGCCACCCGTGGCGAGGACGG GCACCTGCGCTGCCGGCCCATGGCCATGCGCCACGAGGTGCGCGGCGAGGAGATCTGGTTCGCCACCGCGCCGGACTCGA CCAAGTGCCGCGACCTCGAGCACGACCCGCGCTGCGCGCTCGTCTTCTTCGACCCGCAGGACGGCACCACGGTCACGGTG TCGGGCGCCGGCGAGGTGATCCGCGACCGCAAGCTCATGACCGAGCTGTGGGATCCCTCGTGGACGCGCTGGTTCCCGGC CGGCCCGGACCCGCGCGAGGTGGCGCTGCTGCGCGTGATCCCGGAGCACGTCGAGCGGCACGACGGCACGACCGGACGGC TGCAGGTGCTGTTCACCGCGCCGCCGCGCAAGCGCGCGCCCGCCCGCGGCAAGGGCGGCTAG
Upstream 100 bases:
>100_bases GCAGACCGCCTGGCGCGACCGGTAGCGGGGGCCCCCGGCCCCGGCTTCGCCCTCCCCGCCGCCCGCCCGCCGTGGCACCA TGGGCGGCGGGAGGGCCTCC
Downstream 100 bases:
>100_bases CGGCGTCGGCCGCGCGCGGCTACGCCTCGACGGCCCGCTTCAGCCCGGAGGCGAGGTCGTTGAGCGCCTTGGCCTCGGTC GCCACGGCGTGCGTGGTGCT
Product: pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSDDPRATATLLARFRTALLATRGEDGHLRCRPMAMRHEVRGEEIWFATAPDSTKCRDLEHDPRCALVFFDPQDGTTVTV SGAGEVIRDRKLMTELWDPSWTRWFPAGPDPREVALLRVIPEHVERHDGTTGRLQVLFTAPPRKRAPARGKGG
Sequences:
>Translated_153_residues MSDDPRATATLLARFRTALLATRGEDGHLRCRPMAMRHEVRGEEIWFATAPDSTKCRDLEHDPRCALVFFDPQDGTTVTV SGAGEVIRDRKLMTELWDPSWTRWFPAGPDPREVALLRVIPEHVERHDGTTGRLQVLFTAPPRKRAPARGKGG >Mature_152_residues SDDPRATATLLARFRTALLATRGEDGHLRCRPMAMRHEVRGEEIWFATAPDSTKCRDLEHDPRCALVFFDPQDGTTVTVS GAGEVIRDRKLMTELWDPSWTRWFPAGPDPREVALLRVIPEHVERHDGTTGRLQVLFTAPPRKRAPARGKGG
Specific function: Unknown
COG id: COG3871
COG function: function code R; Uncharacterized stress protein (general stress protein 26)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17211; Mature: 17080
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDPRATATLLARFRTALLATRGEDGHLRCRPMAMRHEVRGEEIWFATAPDSTKCRDLE CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCEEEEEECCCCCCCCCCC HDPRCALVFFDPQDGTTVTVSGAGEVIRDRKLMTELWDPSWTRWFPAGPDPREVALLRVI CCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHH PEHVERHDGTTGRLQVLFTAPPRKRAPARGKGG HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SDDPRATATLLARFRTALLATRGEDGHLRCRPMAMRHEVRGEEIWFATAPDSTKCRDLE CCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCEEEEEECCCCCCCCCCC HDPRCALVFFDPQDGTTVTVSGAGEVIRDRKLMTELWDPSWTRWFPAGPDPREVALLRVI CCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHH PEHVERHDGTTGRLQVLFTAPPRKRAPARGKGG HHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA