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The map label for this gene is ycjP [H]

Identifier: 220918412

GI number: 220918412

Start: 3694947

End: 3695792

Strand: Direct

Name: ycjP [H]

Synonym: A2cp1_3316

Alternate gene names: 220918412

Gene position: 3694947-3695792 (Clockwise)

Preceding gene: 220918411

Following gene: 220918413

Centisome position: 73.47

GC content: 66.67

Gene sequence:

>846_bases
GTGATCCGGACGCAGGCGACCCTCGGCACCCGCATCGGCCGCTGGGTGATCGTGGCGGGGTTCGCGGCGCTGCTCGCGTT
CCCGTTCTACTGGATGGCGATCACCTCGTTCAAGCAGACCTCGGACCTCTACGATGTCGAGCACGACCCGTTCATCTTCA
ACGCGGCGCCCACGCTCGACCACCTGCGCTTCCTGTTCCACGAGACGCTGTTCCTGCGCTGGTTCTGGAACACCACGCTG
GCCGGCGCGGCGGTGGTGGTCATCACGCTCCTGCTCGCGGTCCCGGCCGCGTACGCGCTGGCGCGGCTCACCGGCGCGGC
GGGGCAGCAGCTCGGCATCGGCATCTTCCTCACCTACCTCATCCCGCCCACCCTGCTCTTCATCCCCATGTCCCGGGTCG
TCGCGGAGCTCGGGCTGCAGGACACGCTCTGGGCCATCATCGTCACCTACCCGACGTTCACCGTCCCGTTCTCGATCTGG
CTGCTGATGGGCTTCTTCAAGGCCATCCCCAAGGACCTGGAGGAGGCGGCGCTGGTGGACGGGCTGACCCGGTTCGGCGC
GTTCGTGAAGCTCGTCATCCCGATCTCGGTCTCGGGGATCCTGACGGTGGTGATCTTCTCGTTCACGCTGGTGACGCAGG
AGTTCGTGTACGCGCTCACCTTCATCTCCTCGGCCGAGCACCAGACGGTGAGCGTGGGCGTCCCCATCTACCTGGTGCGC
GGCGACGTCTACTACTGGGGCTCGCTCATGGCGGCCTGCCTGCTGGCGAGCCTGCCCATCGCGATCGTCTACAACGTGTT
CCTGGATCGCTTCATCGCCGGCTTCACCGTCGGCGCGGTGAAGTGA

Upstream 100 bases:

>100_bases
GGTGCCGCCATCTCGGTGTTCCTGGTGCCCATCCTGGTCGCGGTGGCGTTCCTGATGCTGCGGGTCGCGCACCGGGCCGA
GGTGACGTGAGGAGGCGCGC

Downstream 100 bases:

>100_bases
GGGGCCCGCGCCCACCGCCTCCGTCCGTCCTTCCGCGCTCGCGGTGAGCGGACGCTCGAGCCGCGTCCCTGCGTCCGCCC
GCGGATGCGCCGGGCTCGCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MIRTQATLGTRIGRWVIVAGFAALLAFPFYWMAITSFKQTSDLYDVEHDPFIFNAAPTLDHLRFLFHETLFLRWFWNTTL
AGAAVVVITLLLAVPAAYALARLTGAAGQQLGIGIFLTYLIPPTLLFIPMSRVVAELGLQDTLWAIIVTYPTFTVPFSIW
LLMGFFKAIPKDLEEAALVDGLTRFGAFVKLVIPISVSGILTVVIFSFTLVTQEFVYALTFISSAEHQTVSVGVPIYLVR
GDVYYWGSLMAACLLASLPIAIVYNVFLDRFIAGFTVGAVK

Sequences:

>Translated_281_residues
MIRTQATLGTRIGRWVIVAGFAALLAFPFYWMAITSFKQTSDLYDVEHDPFIFNAAPTLDHLRFLFHETLFLRWFWNTTL
AGAAVVVITLLLAVPAAYALARLTGAAGQQLGIGIFLTYLIPPTLLFIPMSRVVAELGLQDTLWAIIVTYPTFTVPFSIW
LLMGFFKAIPKDLEEAALVDGLTRFGAFVKLVIPISVSGILTVVIFSFTLVTQEFVYALTFISSAEHQTVSVGVPIYLVR
GDVYYWGSLMAACLLASLPIAIVYNVFLDRFIAGFTVGAVK
>Mature_281_residues
MIRTQATLGTRIGRWVIVAGFAALLAFPFYWMAITSFKQTSDLYDVEHDPFIFNAAPTLDHLRFLFHETLFLRWFWNTTL
AGAAVVVITLLLAVPAAYALARLTGAAGQQLGIGIFLTYLIPPTLLFIPMSRVVAELGLQDTLWAIIVTYPTFTVPFSIW
LLMGFFKAIPKDLEEAALVDGLTRFGAFVKLVIPISVSGILTVVIFSFTLVTQEFVYALTFISSAEHQTVSVGVPIYLVR
GDVYYWGSLMAACLLASLPIAIVYNVFLDRFIAGFTVGAVK

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=284, Percent_Identity=32.0422535211268, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI1790464, Length=217, Percent_Identity=29.4930875576037, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31036; Mature: 31036

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]