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The map label for this gene is ycjO [C]

Identifier: 220918411

GI number: 220918411

Start: 3693992

End: 3694936

Strand: Direct

Name: ycjO [C]

Synonym: A2cp1_3315

Alternate gene names: 220918411

Gene position: 3693992-3694936 (Clockwise)

Preceding gene: 220918410

Following gene: 220918412

Centisome position: 73.45

GC content: 71.01

Gene sequence:

>945_bases
ATGACCCCGGCCGACGCGGCGCGGCCGGCCGCCGGAGCGCTCCGCGACGTCCCGCGCCGCCGCGGCCCGTCTTCGGCGAC
CTGGCTCGGCGTGGCCCTGTTCACGCCGGCGGTGGTCTACATCCTCGCGCTGGTGGGCCTGCCGCTGGCGCTCGCGTTCC
TGTACAGCGTCAGCGACGTCACCGTCGGCTCCGAGGGCTGGTCGTTCGTCGGCCTCGACAACTTCCGCAGCGTGATCCGC
AGCCCCACGTTCCGCCGCGCGCTGCTCGACTCCTTCGTCTTCACGGTCGCCACGCAGGTCATCGTGCTGGTCGCGGCCAC
GGCCCTGTCGCTCGCGCTGCGCGAGCGCTTCCGGGGCCGGGCGGCGGTCCGGTTCCTGATCCTGCTGCCCTGGGTCGCGC
CCATCAGCCTCGGCGCGATCGGCTGGAAGTGGATCCTCGACTCCATCTACTCGGTGGTGAGCTGGGTGCTCGCGCGGCTC
CACCTCGTGAACCGGTTCGACCCGCCCATGTGGCTGGGCGAGCCGGCGCTCGCCATGGGCTCGGTGATCGCCGTGCACGC
CTGGCGCATGATCCCGTTCGCGACCGTGATCATGCTCGCCGGCCTGACCTCCATCCCGAAGGAGATCCCCGAGGCGGCAG
CGGTGGACGGGGCCGGGTTCTGGCGCACGCACTTCCAGATCACCCTCCCCATGATGCGGCCGATCATCAACGTCGCCGTG
CTGTTCGGGGTGGTCTTCACGTTCACCGACATGACGGTGGTCTACATCCTGACCCGCGGCGGTCCGTACGACACCACCCA
GGTGCTGCCGTCGCTGGCGTTCTTCACCGGCGTGCTCGGCTCGGACCTGGCCGAGGGTGCCGCCATCTCGGTGTTCCTGG
TGCCCATCCTGGTCGCGGTGGCGTTCCTGATGCTGCGGGTCGCGCACCGGGCCGAGGTGACGTGA

Upstream 100 bases:

>100_bases
ACGAGGGCGCGGTGCACCCGCTGGCGGTGGCGGAGCGCGATCTCCGGCTGTTCGACCCGGGCACCAAGCGGCGCGTGCCC
ACGCGGGAGCTGGCGTGGCG

Downstream 100 bases:

>100_bases
GGAGGCGCGCGTGATCCGGACGCAGGCGACCCTCGGCACCCGCATCGGCCGCTGGGTGATCGTGGCGGGGTTCGCGGCGC
TGCTCGCGTTCCCGTTCTAC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTPADAARPAAGALRDVPRRRGPSSATWLGVALFTPAVVYILALVGLPLALAFLYSVSDVTVGSEGWSFVGLDNFRSVIR
SPTFRRALLDSFVFTVATQVIVLVAATALSLALRERFRGRAAVRFLILLPWVAPISLGAIGWKWILDSIYSVVSWVLARL
HLVNRFDPPMWLGEPALAMGSVIAVHAWRMIPFATVIMLAGLTSIPKEIPEAAAVDGAGFWRTHFQITLPMMRPIINVAV
LFGVVFTFTDMTVVYILTRGGPYDTTQVLPSLAFFTGVLGSDLAEGAAISVFLVPILVAVAFLMLRVAHRAEVT

Sequences:

>Translated_314_residues
MTPADAARPAAGALRDVPRRRGPSSATWLGVALFTPAVVYILALVGLPLALAFLYSVSDVTVGSEGWSFVGLDNFRSVIR
SPTFRRALLDSFVFTVATQVIVLVAATALSLALRERFRGRAAVRFLILLPWVAPISLGAIGWKWILDSIYSVVSWVLARL
HLVNRFDPPMWLGEPALAMGSVIAVHAWRMIPFATVIMLAGLTSIPKEIPEAAAVDGAGFWRTHFQITLPMMRPIINVAV
LFGVVFTFTDMTVVYILTRGGPYDTTQVLPSLAFFTGVLGSDLAEGAAISVFLVPILVAVAFLMLRVAHRAEVT
>Mature_313_residues
TPADAARPAAGALRDVPRRRGPSSATWLGVALFTPAVVYILALVGLPLALAFLYSVSDVTVGSEGWSFVGLDNFRSVIRS
PTFRRALLDSFVFTVATQVIVLVAATALSLALRERFRGRAAVRFLILLPWVAPISLGAIGWKWILDSIYSVVSWVLARLH
LVNRFDPPMWLGEPALAMGSVIAVHAWRMIPFATVIMLAGLTSIPKEIPEAAAVDGAGFWRTHFQITLPMMRPIINVAVL
FGVVFTFTDMTVVYILTRGGPYDTTQVLPSLAFFTGVLGSDLAEGAAISVFLVPILVAVAFLMLRVAHRAEVT

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=241, Percent_Identity=30.2904564315353, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790465, Length=253, Percent_Identity=26.4822134387352, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789861, Length=298, Percent_Identity=30.5369127516779, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34004; Mature: 33873

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPADAARPAAGALRDVPRRRGPSSATWLGVALFTPAVVYILALVGLPLALAFLYSVSDV
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TVGSEGWSFVGLDNFRSVIRSPTFRRALLDSFVFTVATQVIVLVAATALSLALRERFRGR
EECCCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVRFLILLPWVAPISLGAIGWKWILDSIYSVVSWVLARLHLVNRFDPPMWLGEPALAMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
SVIAVHAWRMIPFATVIMLAGLTSIPKEIPEAAAVDGAGFWRTHFQITLPMMRPIINVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHEEEHHHHHHHHHHHH
LFGVVFTFTDMTVVYILTRGGPYDTTQVLPSLAFFTGVLGSDLAEGAAISVFLVPILVAV
HHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AFLMLRVAHRAEVT
HHHHHHHHHHHCCC
>Mature Secondary Structure 
TPADAARPAAGALRDVPRRRGPSSATWLGVALFTPAVVYILALVGLPLALAFLYSVSDV
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC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HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA