Click here to switch to the map view.

The map label for this gene is 220918370

Identifier: 220918370

GI number: 220918370

Start: 3642229

End: 3643860

Strand: Direct

Name: 220918370

Synonym: A2cp1_3274

Alternate gene names: NA

Gene position: 3642229-3643860 (Clockwise)

Preceding gene: 220918366

Following gene: 220918371

Centisome position: 72.42

GC content: 75.06

Gene sequence:

>1632_bases
ATGCCCGGCCCCCAGCCCGACGCCCCCTTCGACTACGACTACCTGGTGATCGGCTCCGGCTTCGGCGGCTCGGTGTCCGC
GCTGCGGCTGGCCGAGAAGGGCTGGCGCGTCGGCGTGCTCGAGATGGGCAAGCGCTGGCGGCCGGAGGACTTCCCGCGCA
CCAACTGGAACCTGCGCAAGTTCCTGTGGATACCGAGGCTGCGGCTGTTCGGGATCCAGCAGATCACGCTGCTGAAGGAC
GTCCTGGTGCTGCACGGCGCTGGCGTGGGCGGCGGCAGCCTGGTCTACGCGAACACGCTGCTCTCCCCGCCGGACCGCGC
CTTCGAGGATCCGCGCTGGCCGGGCGGCGGCTGGAAGGCGCGCCTCGCGCCGCACTACGCGATGGCGAGGTTCATGCTCG
GCGCGGTCCTGGCGCCGGAAGTGTTCCCGGGCGACGAGGCGCTGCGCCAGGCGGTGGAGGAGGAGACCGGGCGCGGCGAC
ACCTTCGCGCGCCACACCGTCGCGGTGCACTTCGGCGACCCGAAGCGCGCCGCACCGGACCCGTACTTCGGCGGCGAGGG
GCCGGCGCGGATCGGCTGCTCGCTGTGCGGCGAGTGCATGACGGGCTGCCGCCACGGCGCGAAGAACACGCTCGACCGGA
ACTACCTCTACCTGGCCGAGCGGCGCGGCGCCGAGATCCTGCCGGAGACGCGGGTCACCGACCTCCGCCCGCTCGTGGGC
GGAGGCTGGGAGGTCCACACGCGGTCGTCCACGCACGTGGTCCGGCGCCAGCGGCGCGTGCTCCGCGCGCGCGGCGTGGT
GCTGGCCGCGGGCGCGATCGGCACGGTGCGCCTGCTGCTCCGCTGCAGGGCGGGCGGGAGCCTGCCGGCGCTCTCCGATC
AGCTCGGCAACCACGTGCGCACCAACAGCGAGGCGCTGCTCGCCGTCACCGCGCGCCGCGACGACGTGGACTACAGCCAC
GGGCTCGCCATCACCTCGGGGCTGCAGGCGGACGACGACACGCACATGGAGGTCGTCCGCTACGGCGCGGGCCACGACTT
CATGTCGCTCCTCGCCACCCACCTCACCGGCGGCGGCCCGCCCTGGCCGCGCCCGCTGCGCTGGCTCGGGAACCTGTTCC
GGCACCCGGTGGACTTCTTCCGCGCGCACTGGCCGTTCGGCTGGGCGCGCCGCACCGCGGTGCTGCTCGTGATGCAGCCG
CTCGCGAGCCACCTGCGGCTGCGGCTCGCGCGCCGGCCGTGGGGGCGATCCCTCACCAGCGCGCTCGACGGCCCGCGGCC
GCCGAGCTACATGCCGCTCGCGAACGCGGTGGCGCGCAGGATGGCGGCGCGCATGGACGGGGTGGCGCAGAGCGGGCTCC
ACGAGGTGTTCCTGGGCGCCTCGAGCACCGCGCACATCCTGGGCGGCGCGACCATGGGCGCCTCGCCGGCCGAGGGCGTG
TGCGACGCGCAGGGACGCGTGTTCGGCTACCAGGACCTCTACGTCGCCGACGGCAGCCTGGTGCCCGCGAACCTGGGCGT
GAACCCGTCGCTCACCATCACCGCGCTGGCCGAGCACGTCATGAGCCGGATCCCCGCCAGCCCCGCCGGCGCGCAGCGGC
CGGCCCCGCGTCCGCCGGGTGGCGCCGCGTGA

Upstream 100 bases:

>100_bases
CCACGAGGCAGAACCTACCGCGCGACCCGCCCGGGCGCGAGCGCCGGCGGAGCGCCGCTCGACCGCGCGCCGTGGCCGCG
GTTAGCATGAACGTTCGACC

Downstream 100 bases:

>100_bases
CCGGGCGCCGCGCGCCTTCCCGTCTGAGCCCGAATTGGGGCTTGAGTCCGCTGGGCGCGGGCGCGCACGCTTCCAGAGGG
TTCACGCCACGCCGCAGCTC

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: Glucose-Methanol-Choline Oxidoreductase; FAD Dependent Oxidoreductase; GMC Oxidoreductase; Oxidoreductase; Choline Dehydrogenase; Cholesterol Oxidase ChoD; Choline Dehydrogenase-Like Flavoprotein; Oxidase; Oxidoreductase Glucose-Methanol-Choline Family; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Gmc Oxidoreductase Family Protein; Ferredoxin Domain Gmc Oxidoreductase; Cholesterol Oxidase ChoD; GMC Family Oxidoreductase; Cholesterol-O2 Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; GMC Oxidoreductase Family Protein; Cholesterol Oxidase Chod; GMC Oxidoreductase Family

Number of amino acids: Translated: 543; Mature: 542

Protein sequence:

>543_residues
MPGPQPDAPFDYDYLVIGSGFGGSVSALRLAEKGWRVGVLEMGKRWRPEDFPRTNWNLRKFLWIPRLRLFGIQQITLLKD
VLVLHGAGVGGGSLVYANTLLSPPDRAFEDPRWPGGGWKARLAPHYAMARFMLGAVLAPEVFPGDEALRQAVEEETGRGD
TFARHTVAVHFGDPKRAAPDPYFGGEGPARIGCSLCGECMTGCRHGAKNTLDRNYLYLAERRGAEILPETRVTDLRPLVG
GGWEVHTRSSTHVVRRQRRVLRARGVVLAAGAIGTVRLLLRCRAGGSLPALSDQLGNHVRTNSEALLAVTARRDDVDYSH
GLAITSGLQADDDTHMEVVRYGAGHDFMSLLATHLTGGGPPWPRPLRWLGNLFRHPVDFFRAHWPFGWARRTAVLLVMQP
LASHLRLRLARRPWGRSLTSALDGPRPPSYMPLANAVARRMAARMDGVAQSGLHEVFLGASSTAHILGGATMGASPAEGV
CDAQGRVFGYQDLYVADGSLVPANLGVNPSLTITALAEHVMSRIPASPAGAQRPAPRPPGGAA

Sequences:

>Translated_543_residues
MPGPQPDAPFDYDYLVIGSGFGGSVSALRLAEKGWRVGVLEMGKRWRPEDFPRTNWNLRKFLWIPRLRLFGIQQITLLKD
VLVLHGAGVGGGSLVYANTLLSPPDRAFEDPRWPGGGWKARLAPHYAMARFMLGAVLAPEVFPGDEALRQAVEEETGRGD
TFARHTVAVHFGDPKRAAPDPYFGGEGPARIGCSLCGECMTGCRHGAKNTLDRNYLYLAERRGAEILPETRVTDLRPLVG
GGWEVHTRSSTHVVRRQRRVLRARGVVLAAGAIGTVRLLLRCRAGGSLPALSDQLGNHVRTNSEALLAVTARRDDVDYSH
GLAITSGLQADDDTHMEVVRYGAGHDFMSLLATHLTGGGPPWPRPLRWLGNLFRHPVDFFRAHWPFGWARRTAVLLVMQP
LASHLRLRLARRPWGRSLTSALDGPRPPSYMPLANAVARRMAARMDGVAQSGLHEVFLGASSTAHILGGATMGASPAEGV
CDAQGRVFGYQDLYVADGSLVPANLGVNPSLTITALAEHVMSRIPASPAGAQRPAPRPPGGAA
>Mature_542_residues
PGPQPDAPFDYDYLVIGSGFGGSVSALRLAEKGWRVGVLEMGKRWRPEDFPRTNWNLRKFLWIPRLRLFGIQQITLLKDV
LVLHGAGVGGGSLVYANTLLSPPDRAFEDPRWPGGGWKARLAPHYAMARFMLGAVLAPEVFPGDEALRQAVEEETGRGDT
FARHTVAVHFGDPKRAAPDPYFGGEGPARIGCSLCGECMTGCRHGAKNTLDRNYLYLAERRGAEILPETRVTDLRPLVGG
GWEVHTRSSTHVVRRQRRVLRARGVVLAAGAIGTVRLLLRCRAGGSLPALSDQLGNHVRTNSEALLAVTARRDDVDYSHG
LAITSGLQADDDTHMEVVRYGAGHDFMSLLATHLTGGGPPWPRPLRWLGNLFRHPVDFFRAHWPFGWARRTAVLLVMQPL
ASHLRLRLARRPWGRSLTSALDGPRPPSYMPLANAVARRMAARMDGVAQSGLHEVFLGASSTAHILGGATMGASPAEGVC
DAQGRVFGYQDLYVADGSLVPANLGVNPSLTITALAEHVMSRIPASPAGAQRPAPRPPGGAA

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58793; Mature: 58662

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGPQPDAPFDYDYLVIGSGFGGSVSALRLAEKGWRVGVLEMGKRWRPEDFPRTNWNLRK
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCHHH
FLWIPRLRLFGIQQITLLKDVLVLHGAGVGGGSLVYANTLLSPPDRAFEDPRWPGGGWKA
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCC
RLAPHYAMARFMLGAVLAPEVFPGDEALRQAVEEETGRGDTFARHTVAVHFGDPKRAAPD
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCC
PYFGGEGPARIGCSLCGECMTGCRHGAKNTLDRNYLYLAERRGAEILPETRVTDLRPLVG
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCC
GGWEVHTRSSTHVVRRQRRVLRARGVVLAAGAIGTVRLLLRCRAGGSLPALSDQLGNHVR
CCEEEEECCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCCCHHHHHHCCHHC
TNSEALLAVTARRDDVDYSHGLAITSGLQADDDTHMEVVRYGAGHDFMSLLATHLTGGGP
CCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCC
PWPRPLRWLGNLFRHPVDFFRAHWPFGWARRTAVLLVMQPLASHLRLRLARRPWGRSLTS
CCCHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALDGPRPPSYMPLANAVARRMAARMDGVAQSGLHEVFLGASSTAHILGGATMGASPAEGV
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHEECCCCCCCCCCCCC
CDAQGRVFGYQDLYVADGSLVPANLGVNPSLTITALAEHVMSRIPASPAGAQRPAPRPPG
CCCCCCEECCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GAA
CCC
>Mature Secondary Structure 
PGPQPDAPFDYDYLVIGSGFGGSVSALRLAEKGWRVGVLEMGKRWRPEDFPRTNWNLRK
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCHHH
FLWIPRLRLFGIQQITLLKDVLVLHGAGVGGGSLVYANTLLSPPDRAFEDPRWPGGGWKA
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCC
RLAPHYAMARFMLGAVLAPEVFPGDEALRQAVEEETGRGDTFARHTVAVHFGDPKRAAPD
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCC
PYFGGEGPARIGCSLCGECMTGCRHGAKNTLDRNYLYLAERRGAEILPETRVTDLRPLVG
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCC
GGWEVHTRSSTHVVRRQRRVLRARGVVLAAGAIGTVRLLLRCRAGGSLPALSDQLGNHVR
CCEEEEECCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCCCHHHHHHCCHHC
TNSEALLAVTARRDDVDYSHGLAITSGLQADDDTHMEVVRYGAGHDFMSLLATHLTGGGP
CCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCC
PWPRPLRWLGNLFRHPVDFFRAHWPFGWARRTAVLLVMQPLASHLRLRLARRPWGRSLTS
CCCHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALDGPRPPSYMPLANAVARRMAARMDGVAQSGLHEVFLGASSTAHILGGATMGASPAEGV
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHEECCCCCCCCCCCCC
CDAQGRVFGYQDLYVADGSLVPANLGVNPSLTITALAEHVMSRIPASPAGAQRPAPRPPG
CCCCCCEECCCEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA