| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is cshA [H]
Identifier: 220918339
GI number: 220918339
Start: 3601486
End: 3603183
Strand: Direct
Name: cshA [H]
Synonym: A2cp1_3243
Alternate gene names: 220918339
Gene position: 3601486-3603183 (Clockwise)
Preceding gene: 220918338
Following gene: 220918341
Centisome position: 71.61
GC content: 79.15
Gene sequence:
>1698_bases GTGACCTTCACCGAGCTCGGCGCCCACCCTGCCCTCGCCCGCGCGCTGGAGCGCCGCGGCTACACCGAGCCGACGACCGT GCAGGAGGCGGTGTTCACGCCCGCGCTCCGCGGCCGCGACCTGCTCGTCTCGTCCGCGACCGGCTCGGGCAAGACGGTCG CCTACGGCCTCGTGCTGGGCGGCTCGCTGCTCGGCGACGCCCCCGCGTTCGGCCCCGCCGGCGCCCCCGCCGGCCTGGTG GTCGCCCCCACCCGCGAGCTCGCCATGCAGGTGCAGCGCGAGCTGGCCTGGCTGCTCGCCGAGGCCGAGGGGCGGGTCGT GGCCTGCGTGGGCGGCATGGACGCGCGGCGCGAGGCGCGCGCGCTGTCGGACGGCGCCCACCTGGTGGTGGGGACGCCCG GCCGCCTGCTCGACCACCACCGCCGCGGCGCGCTCGACCTGTCCGAGCTGCGCGCGCTGGTGCTGGACGAGGCGGACGAG ATGCTGGACATGGGCTTCCGCGACGAGCTGGAGGCCATCCTCGCCGCCGCGCCCGAGGGGCGCCGCACCATCCTCTTCTC CGCCACGCTCCCGAAGCCCATCGTCGAGCTGGCCCGCCGCTACACCAGCGATCCGGCGCGCGTCGCCGCCACGCCCGCCG GCGAGGCGCACGCGGACATCACGTACCGCGCCCACGTGGTCGCGCCGAGCGAGCGCGAGCTGGCGGTGGTCAACGTGCTG CGCGCGCTGGAGCCGCCGCGGGCGCTGGTGTTCCGCGCCACCCGCGAGGCCGCCCACCACACCGCCTCCAGCCTGTCCGA GCGCGGCTTCGCGGCCGTCCCCATCTCCGGCGAGCTGACCCAGGCCGAGCGGAACCGCGCGCTCGTCGCCCTGCGCGACG GCCGCGCGCGCGTGCTGGTCGCGACCGACGTCGCCGCGCGCGGGCTCGACCTGCCCGGCCTCGACCTCGTGCTCCACGCC GACCTCCCCCGCGATCCGGCGGCGCTGCAGCACCGGAGCGGCCGCACCGGACGCGCCGGGCGCAAGGGCCTGGCCGTGCT GCTGGCGGCGCCGCCCGAGCGCTACAAGCTGGAGCGGATGCTCCGGGACGCCGGCGTGCGGGTCGAGTGGGCCCCCGTCC CCGCCGCCGAGGCCATCCGCGCGTCCGACGAGGCGCGCCTCGCCGGCGAGGTGGACGCGCTGTCGGAGGACGCGACCGAC GACGAGCGCGCCGCCGCCGCCCGGCTGCTGTCGGGCCGCGATCCGGTGCTCGTCGCCGCCGCGCTGGTCCGCTCCACGCG CGCCCGGCTGCCCTCGCCCGAGGACCTTCCCGAGACCGTCCACGCCGCCCGCCAGGCCCCCTCGCCCCGCGGCGAGCGCG CGCCGCGGCGCGGCCCGCCCGCCGAGGTGGCCTGGTTCCGGATCAACCTCGGGCGCGAGAAGAAGGCCGATCCGAAGTGG CTGCTGCCGCTCCTGTGCCGGCGAGGCGGCGTGACCCGCGACGAGATCGGCAAGATCGTGATCGGCGCCACCGAGACGCG GTTCGAGGTGGCCCGCGCCGCCGCGGCGCGGTTCGGCGCGACGGCGCGGCGGCCGGATCCGCGCGCGCCCGGCGTCCGCA TCGAGCCGGTGCGCGAGACGCGGTCCCCCGGCGAGCACCGCGCGCACGCGGGCGGCGAGCGCGCGCCGCGCGCGCGCCGG CCCGTCACTCGGACCTGA
Upstream 100 bases:
>100_bases GTCCGGATCGACCATTGAGCGCGCGAGGCACGGGGCCCGCGCGGCAGCGTGGGGCGCAGCCCCGCATGATCCCCGCCGCG GAACCTGCTAGAACGCGCCC
Downstream 100 bases:
>100_bases ACGTCCGGACCCCGAAGATCGCCGACACCACCCAGGACAGGAACGTGAGGGCGAGCGCGAGGAGCAGCGAGCGCCAGAAG CCGAGCCCGTAGCTCGCCGC
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MTFTELGAHPALARALERRGYTEPTTVQEAVFTPALRGRDLLVSSATGSGKTVAYGLVLGGSLLGDAPAFGPAGAPAGLV VAPTRELAMQVQRELAWLLAEAEGRVVACVGGMDARREARALSDGAHLVVGTPGRLLDHHRRGALDLSELRALVLDEADE MLDMGFRDELEAILAAAPEGRRTILFSATLPKPIVELARRYTSDPARVAATPAGEAHADITYRAHVVAPSERELAVVNVL RALEPPRALVFRATREAAHHTASSLSERGFAAVPISGELTQAERNRALVALRDGRARVLVATDVAARGLDLPGLDLVLHA DLPRDPAALQHRSGRTGRAGRKGLAVLLAAPPERYKLERMLRDAGVRVEWAPVPAAEAIRASDEARLAGEVDALSEDATD DERAAAARLLSGRDPVLVAAALVRSTRARLPSPEDLPETVHAARQAPSPRGERAPRRGPPAEVAWFRINLGREKKADPKW LLPLLCRRGGVTRDEIGKIVIGATETRFEVARAAAARFGATARRPDPRAPGVRIEPVRETRSPGEHRAHAGGERAPRARR PVTRT
Sequences:
>Translated_565_residues MTFTELGAHPALARALERRGYTEPTTVQEAVFTPALRGRDLLVSSATGSGKTVAYGLVLGGSLLGDAPAFGPAGAPAGLV VAPTRELAMQVQRELAWLLAEAEGRVVACVGGMDARREARALSDGAHLVVGTPGRLLDHHRRGALDLSELRALVLDEADE MLDMGFRDELEAILAAAPEGRRTILFSATLPKPIVELARRYTSDPARVAATPAGEAHADITYRAHVVAPSERELAVVNVL RALEPPRALVFRATREAAHHTASSLSERGFAAVPISGELTQAERNRALVALRDGRARVLVATDVAARGLDLPGLDLVLHA DLPRDPAALQHRSGRTGRAGRKGLAVLLAAPPERYKLERMLRDAGVRVEWAPVPAAEAIRASDEARLAGEVDALSEDATD DERAAAARLLSGRDPVLVAAALVRSTRARLPSPEDLPETVHAARQAPSPRGERAPRRGPPAEVAWFRINLGREKKADPKW LLPLLCRRGGVTRDEIGKIVIGATETRFEVARAAAARFGATARRPDPRAPGVRIEPVRETRSPGEHRAHAGGERAPRARR PVTRT >Mature_564_residues TFTELGAHPALARALERRGYTEPTTVQEAVFTPALRGRDLLVSSATGSGKTVAYGLVLGGSLLGDAPAFGPAGAPAGLVV APTRELAMQVQRELAWLLAEAEGRVVACVGGMDARREARALSDGAHLVVGTPGRLLDHHRRGALDLSELRALVLDEADEM LDMGFRDELEAILAAAPEGRRTILFSATLPKPIVELARRYTSDPARVAATPAGEAHADITYRAHVVAPSERELAVVNVLR ALEPPRALVFRATREAAHHTASSLSERGFAAVPISGELTQAERNRALVALRDGRARVLVATDVAARGLDLPGLDLVLHAD LPRDPAALQHRSGRTGRAGRKGLAVLLAAPPERYKLERMLRDAGVRVEWAPVPAAEAIRASDEARLAGEVDALSEDATDD ERAAAARLLSGRDPVLVAAALVRSTRARLPSPEDLPETVHAARQAPSPRGERAPRRGPPAEVAWFRINLGREKKADPKWL LPLLCRRGGVTRDEIGKIVIGATETRFEVARAAAARFGATARRPDPRAPGVRIEPVRETRSPGEHRAHAGGERAPRARRP VTRT
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=354, Percent_Identity=36.7231638418079, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI45446743, Length=354, Percent_Identity=36.7231638418079, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI20149629, Length=384, Percent_Identity=32.8125, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI50659095, Length=428, Percent_Identity=32.9439252336449, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI13129006, Length=419, Percent_Identity=32.4582338902148, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI21071032, Length=354, Percent_Identity=35.5932203389831, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI7661920, Length=385, Percent_Identity=31.6883116883117, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI301171467, Length=362, Percent_Identity=36.7403314917127, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI87196351, Length=362, Percent_Identity=36.7403314917127, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI301171475, Length=362, Percent_Identity=36.7403314917127, Blast_Score=202, Evalue=8e-52, Organism=Homo sapiens, GI169881239, Length=363, Percent_Identity=36.9146005509642, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI13514809, Length=363, Percent_Identity=36.9146005509642, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=35.5932203389831, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=35.5932203389831, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=35.5932203389831, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=35.5932203389831, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI224593278, Length=386, Percent_Identity=33.160621761658, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI31542656, Length=430, Percent_Identity=33.0232558139535, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI41327771, Length=369, Percent_Identity=31.9783197831978, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI38327634, Length=374, Percent_Identity=32.8877005347594, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI222352149, Length=349, Percent_Identity=32.9512893982808, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI164664518, Length=376, Percent_Identity=29.2553191489362, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI148613856, Length=340, Percent_Identity=33.8235294117647, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI38201710, Length=340, Percent_Identity=33.8235294117647, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI83700235, Length=384, Percent_Identity=30.9895833333333, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI4503529, Length=384, Percent_Identity=30.46875, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI4758138, Length=355, Percent_Identity=31.5492957746479, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI55749865, Length=345, Percent_Identity=30.7246376811594, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI41327773, Length=359, Percent_Identity=31.4763231197772, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI188035877, Length=378, Percent_Identity=30.952380952381, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI41327776, Length=384, Percent_Identity=30.7291666666667, Blast_Score=172, Evalue=9e-43, Organism=Homo sapiens, GI41327779, Length=362, Percent_Identity=33.4254143646409, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI21040371, Length=384, Percent_Identity=29.4270833333333, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI13514831, Length=365, Percent_Identity=30.4109589041096, Blast_Score=169, Evalue=8e-42, Organism=Homo sapiens, GI4758112, Length=371, Percent_Identity=28.8409703504043, Blast_Score=169, Evalue=9e-42, Organism=Homo sapiens, GI18375623, Length=371, Percent_Identity=28.8409703504043, Blast_Score=169, Evalue=9e-42, Organism=Homo sapiens, GI164419743, Length=353, Percent_Identity=31.1614730878187, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI51094101, Length=353, Percent_Identity=31.1614730878187, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI17505907, Length=405, Percent_Identity=31.6049382716049, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI164419732, Length=340, Percent_Identity=31.7647058823529, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI256223453, Length=368, Percent_Identity=28.5326086956522, Blast_Score=149, Evalue=9e-36, Organism=Homo sapiens, GI6005743, Length=359, Percent_Identity=30.6406685236769, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI8922886, Length=359, Percent_Identity=30.3621169916435, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI38569505, Length=386, Percent_Identity=29.7927461139896, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI38569503, Length=386, Percent_Identity=29.7927461139896, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=28.6075949367089, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI62241022, Length=340, Percent_Identity=30.8823529411765, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI62241024, Length=320, Percent_Identity=31.25, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI154759257, Length=431, Percent_Identity=29.2343387470998, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI9966805, Length=318, Percent_Identity=28.9308176100629, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI256773275, Length=369, Percent_Identity=30.0813008130081, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=28.5714285714286, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI20336298, Length=214, Percent_Identity=36.4485981308411, Blast_Score=118, Evalue=2e-26, Organism=Escherichia coli, GI87082221, Length=538, Percent_Identity=35.3159851301115, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1787605, Length=382, Percent_Identity=37.696335078534, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI1787016, Length=363, Percent_Identity=35.8126721763085, Blast_Score=211, Evalue=7e-56, Organism=Escherichia coli, GI1788930, Length=350, Percent_Identity=40.5714285714286, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI1790214, Length=361, Percent_Identity=32.9639889196676, Blast_Score=177, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17555296, Length=410, Percent_Identity=33.6585365853659, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71987143, Length=379, Percent_Identity=29.8153034300792, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71995724, Length=385, Percent_Identity=32.2077922077922, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507121, Length=385, Percent_Identity=32.2077922077922, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17510307, Length=394, Percent_Identity=35.5329949238579, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI17552642, Length=352, Percent_Identity=35.2272727272727, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI17510309, Length=394, Percent_Identity=35.5329949238579, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI17507945, Length=379, Percent_Identity=35.8839050131926, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI86570094, Length=362, Percent_Identity=34.8066298342541, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71995514, Length=394, Percent_Identity=35.7868020304569, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17552114, Length=364, Percent_Identity=29.9450549450549, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=35.3562005277045, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17510559, Length=411, Percent_Identity=29.683698296837, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI115533224, Length=347, Percent_Identity=33.4293948126801, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=31.5789473684211, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI71999646, Length=353, Percent_Identity=31.728045325779, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71982858, Length=355, Percent_Identity=31.2676056338028, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71999644, Length=354, Percent_Identity=32.2033898305085, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17509811, Length=360, Percent_Identity=32.5, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17537549, Length=371, Percent_Identity=31.5363881401617, Blast_Score=175, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17505370, Length=376, Percent_Identity=31.1170212765957, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17507881, Length=368, Percent_Identity=31.7934782608696, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17507641, Length=429, Percent_Identity=30.5361305361305, Blast_Score=165, Evalue=7e-41, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=31.0810810810811, Blast_Score=164, Evalue=9e-41, Organism=Caenorhabditis elegans, GI115532548, Length=429, Percent_Identity=30.3030303030303, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI115532546, Length=354, Percent_Identity=32.7683615819209, Blast_Score=164, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17507879, Length=393, Percent_Identity=31.0432569974555, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI32564046, Length=423, Percent_Identity=30.2600472813239, Blast_Score=158, Evalue=9e-39, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=29.512893982808, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI193208216, Length=381, Percent_Identity=29.6587926509186, Blast_Score=139, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17556951, Length=401, Percent_Identity=28.6783042394015, Blast_Score=138, Evalue=8e-33, Organism=Caenorhabditis elegans, GI17536099, Length=394, Percent_Identity=26.3959390862944, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17536101, Length=394, Percent_Identity=26.3959390862944, Blast_Score=135, Evalue=8e-32, Organism=Caenorhabditis elegans, GI71997889, Length=422, Percent_Identity=27.4881516587678, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17553716, Length=373, Percent_Identity=26.2734584450402, Blast_Score=133, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17536103, Length=394, Percent_Identity=26.3959390862944, Blast_Score=131, Evalue=8e-31, Organism=Caenorhabditis elegans, GI71990816, Length=361, Percent_Identity=28.808864265928, Blast_Score=128, Evalue=7e-30, Organism=Caenorhabditis elegans, GI17508543, Length=361, Percent_Identity=28.5318559556787, Blast_Score=128, Evalue=1e-29, Organism=Caenorhabditis elegans, GI25148203, Length=403, Percent_Identity=23.8213399503722, Blast_Score=122, Evalue=7e-28, Organism=Caenorhabditis elegans, GI25148291, Length=350, Percent_Identity=27.1428571428571, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71982862, Length=213, Percent_Identity=31.4553990610329, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI71987152, Length=115, Percent_Identity=33.9130434782609, Blast_Score=76, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6324217, Length=374, Percent_Identity=35.5614973262032, Blast_Score=217, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=34.435261707989, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6325138, Length=348, Percent_Identity=37.0689655172414, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6324778, Length=339, Percent_Identity=38.6430678466077, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321360, Length=363, Percent_Identity=33.3333333333333, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=34.4444444444444, Blast_Score=193, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6320224, Length=385, Percent_Identity=28.8311688311688, Blast_Score=189, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=33.1506849315069, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320041, Length=377, Percent_Identity=29.7082228116711, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6322912, Length=330, Percent_Identity=29.0909090909091, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322323, Length=330, Percent_Identity=29.0909090909091, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321963, Length=361, Percent_Identity=33.5180055401662, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=29.3956043956044, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6324620, Length=391, Percent_Identity=28.6445012787724, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6320449, Length=341, Percent_Identity=31.3782991202346, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6321111, Length=358, Percent_Identity=31.0055865921788, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6320119, Length=362, Percent_Identity=28.7292817679558, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6319618, Length=410, Percent_Identity=27.0731707317073, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=331, Percent_Identity=30.8157099697885, Blast_Score=150, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6319714, Length=391, Percent_Identity=25.5754475703325, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6320400, Length=372, Percent_Identity=28.494623655914, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323306, Length=416, Percent_Identity=24.7596153846154, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6322876, Length=433, Percent_Identity=27.9445727482679, Blast_Score=121, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6320173, Length=198, Percent_Identity=32.8282828282828, Blast_Score=113, Evalue=6e-26, Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=34.9295774647887, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24585582, Length=359, Percent_Identity=33.4261838440111, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24645031, Length=385, Percent_Identity=30.6493506493506, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI17977678, Length=355, Percent_Identity=35.7746478873239, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=34.375, Blast_Score=201, Evalue=9e-52, Organism=Drosophila melanogaster, GI28574962, Length=377, Percent_Identity=33.1564986737401, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI17985987, Length=363, Percent_Identity=36.3636363636364, Blast_Score=195, Evalue=9e-50, Organism=Drosophila melanogaster, GI18857967, Length=363, Percent_Identity=33.0578512396694, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI28571808, Length=348, Percent_Identity=33.6206896551724, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI28571809, Length=348, Percent_Identity=33.6206896551724, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24582080, Length=379, Percent_Identity=30.3430079155673, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24582078, Length=379, Percent_Identity=30.3430079155673, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI17136248, Length=379, Percent_Identity=30.3430079155673, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24582075, Length=379, Percent_Identity=30.3430079155673, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24584994, Length=375, Percent_Identity=30.9333333333333, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24583281, Length=375, Percent_Identity=29.0666666666667, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24583279, Length=375, Percent_Identity=29.0666666666667, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24642151, Length=362, Percent_Identity=32.5966850828729, Blast_Score=181, Evalue=9e-46, Organism=Drosophila melanogaster, GI24644479, Length=350, Percent_Identity=31.7142857142857, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI21356161, Length=380, Percent_Identity=32.1052631578947, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24644483, Length=350, Percent_Identity=31.7142857142857, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI281361218, Length=350, Percent_Identity=31.7142857142857, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24644481, Length=350, Percent_Identity=31.7142857142857, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24644487, Length=350, Percent_Identity=31.7142857142857, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI45551833, Length=350, Percent_Identity=31.7142857142857, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24644485, Length=350, Percent_Identity=31.7142857142857, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI21355075, Length=355, Percent_Identity=32.112676056338, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI28575014, Length=350, Percent_Identity=32.2857142857143, Blast_Score=178, Evalue=8e-45, Organism=Drosophila melanogaster, GI17136814, Length=442, Percent_Identity=30.316742081448, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=33.4394904458599, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI17647335, Length=371, Percent_Identity=29.6495956873315, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24581954, Length=365, Percent_Identity=29.5890410958904, Blast_Score=165, Evalue=8e-41, Organism=Drosophila melanogaster, GI24581952, Length=365, Percent_Identity=29.5890410958904, Blast_Score=165, Evalue=8e-41, Organism=Drosophila melanogaster, GI24581956, Length=365, Percent_Identity=29.5890410958904, Blast_Score=165, Evalue=8e-41, Organism=Drosophila melanogaster, GI28571338, Length=474, Percent_Identity=30.168776371308, Blast_Score=165, Evalue=9e-41, Organism=Drosophila melanogaster, GI18859659, Length=474, Percent_Identity=30.168776371308, Blast_Score=165, Evalue=9e-41, Organism=Drosophila melanogaster, GI24642822, Length=377, Percent_Identity=30.7692307692308, Blast_Score=159, Evalue=6e-39, Organism=Drosophila melanogaster, GI24666101, Length=348, Percent_Identity=31.8965517241379, Blast_Score=145, Evalue=9e-35, Organism=Drosophila melanogaster, GI20130173, Length=435, Percent_Identity=27.1264367816092, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI21355559, Length=368, Percent_Identity=32.3369565217391, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI24668515, Length=342, Percent_Identity=29.8245614035088, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24643725, Length=385, Percent_Identity=25.1948051948052, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI17136666, Length=398, Percent_Identity=28.1407035175879, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI19920478, Length=411, Percent_Identity=25.5474452554745, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24640164, Length=370, Percent_Identity=23.5135135135135, Blast_Score=92, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 60446; Mature: 60314
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTELGAHPALARALERRGYTEPTTVQEAVFTPALRGRDLLVSSATGSGKTVAYGLVLG CCCHHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEC GSLLGDAPAFGPAGAPAGLVVAPTRELAMQVQRELAWLLAEAEGRVVACVGGMDARREAR CHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH ALSDGAHLVVGTPGRLLDHHRRGALDLSELRALVLDEADEMLDMGFRDELEAILAAAPEG HHCCCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC RRTILFSATLPKPIVELARRYTSDPARVAATPAGEAHADITYRAHVVAPSERELAVVNVL CEEEEEECCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHH RALEPPRALVFRATREAAHHTASSLSERGFAAVPISGELTQAERNRALVALRDGRARVLV HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCEEEEEECCCEEEEE ATDVAARGLDLPGLDLVLHADLPRDPAALQHRSGRTGRAGRKGLAVLLAAPPERYKLERM EECHHHCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHH LRDAGVRVEWAPVPAAEAIRASDEARLAGEVDALSEDATDDERAAAARLLSGRDPVLVAA HHHCCCEEEECCCCHHHHHHCCCHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHH ALVRSTRARLPSPEDLPETVHAARQAPSPRGERAPRRGPPAEVAWFRINLGREKKADPKW HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHH LLPLLCRRGGVTRDEIGKIVIGATETRFEVARAAAARFGATARRPDPRAPGVRIEPVRET HHHHHHHCCCCCHHHHCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHC RSPGEHRAHAGGERAPRARRPVTRT CCCCCHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFTELGAHPALARALERRGYTEPTTVQEAVFTPALRGRDLLVSSATGSGKTVAYGLVLG CCHHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEC GSLLGDAPAFGPAGAPAGLVVAPTRELAMQVQRELAWLLAEAEGRVVACVGGMDARREAR CHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH ALSDGAHLVVGTPGRLLDHHRRGALDLSELRALVLDEADEMLDMGFRDELEAILAAAPEG HHCCCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC RRTILFSATLPKPIVELARRYTSDPARVAATPAGEAHADITYRAHVVAPSERELAVVNVL CEEEEEECCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHH RALEPPRALVFRATREAAHHTASSLSERGFAAVPISGELTQAERNRALVALRDGRARVLV HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCEEEEEECCCEEEEE ATDVAARGLDLPGLDLVLHADLPRDPAALQHRSGRTGRAGRKGLAVLLAAPPERYKLERM EECHHHCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHH LRDAGVRVEWAPVPAAEAIRASDEARLAGEVDALSEDATDDERAAAARLLSGRDPVLVAA HHHCCCEEEECCCCHHHHHHCCCHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHH ALVRSTRARLPSPEDLPETVHAARQAPSPRGERAPRRGPPAEVAWFRINLGREKKADPKW HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHH LLPLLCRRGGVTRDEIGKIVIGATETRFEVARAAAARFGATARRPDPRAPGVRIEPVRET HHHHHHHCCCCCHHHHCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHC RSPGEHRAHAGGERAPRARRPVTRT CCCCCHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12721630 [H]