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The map label for this gene is yhbO [H]

Identifier: 220918336

GI number: 220918336

Start: 3599443

End: 3600009

Strand: Direct

Name: yhbO [H]

Synonym: A2cp1_3240

Alternate gene names: 220918336

Gene position: 3599443-3600009 (Clockwise)

Preceding gene: 220918335

Following gene: 220918337

Centisome position: 71.57

GC content: 70.72

Gene sequence:

>567_bases
ATGGCACGCATCGCATTCATCGCGGACGATCTGTTCGAGGACTCGGAGCTCCGCGTCCCGTGGGACCGCCTGCGGCAGGC
CGGGCACGAGACCGTGCTGGTGGGCCTCGAGAAGGGGAAGCAGATCCGCGGCAAGAAGCAGCGGGAGACGTTCACCACGG
ACGTGGCGGCGCGGGACGTCACCGCCGAGGACTTCGACGCGCTGGTGGTGCCCGGCGGCTACTCCCCCGATCACCTCCGC
ACCGACATGGACATGGTCCGGCTGGTCCGGACCACGTTCACCGCGGGGAAGCCCGTCGCCGCGGTCTGCCACGGACCGTG
GATGCTGGTGGAGGCGGACGCGATCGACGGCAAGACCGTCACCTCCTGGCCCTCGCTCAAGACCGACCTCATCAACGCCG
GCGCCCGCTGGGTTGACCGCGAGGTGGTCGAGGACGAGAACGTCATCACGAGCCGCAAGCCGGACGACCTCGAGGCCTTC
TCCGAAGCCATCCTGCGCCACCTGGGCGAGGAGCCGCGGGCGCGGACCGGCGACTCGGCGGGCGCGGAGCAGGGCGCGGG
GATCTGA

Upstream 100 bases:

>100_bases
TCTGGTGGAACCCACCGGAGCGACCCGGCGCCTGACGAATTTCCGCGCCGTCGCCTTGTGCGGCGCGCGGCCTGTGCCGA
ACCTCCACTCGGAGGAACCC

Downstream 100 bases:

>100_bases
CCGCGGCGTCCGGCCCGTCGATCCCTCCACTCGGGGTCGGCTCGCTCACCCCGAGCGGTTCTCGACCTCCGCTCGCGCCG
ACCGCCGTCGAAGGGCGAGC

Product: intracellular protease, PfpI family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MARIAFIADDLFEDSELRVPWDRLRQAGHETVLVGLEKGKQIRGKKQRETFTTDVAARDVTAEDFDALVVPGGYSPDHLR
TDMDMVRLVRTTFTAGKPVAAVCHGPWMLVEADAIDGKTVTSWPSLKTDLINAGARWVDREVVEDENVITSRKPDDLEAF
SEAILRHLGEEPRARTGDSAGAEQGAGI

Sequences:

>Translated_188_residues
MARIAFIADDLFEDSELRVPWDRLRQAGHETVLVGLEKGKQIRGKKQRETFTTDVAARDVTAEDFDALVVPGGYSPDHLR
TDMDMVRLVRTTFTAGKPVAAVCHGPWMLVEADAIDGKTVTSWPSLKTDLINAGARWVDREVVEDENVITSRKPDDLEAF
SEAILRHLGEEPRARTGDSAGAEQGAGI
>Mature_187_residues
ARIAFIADDLFEDSELRVPWDRLRQAGHETVLVGLEKGKQIRGKKQRETFTTDVAARDVTAEDFDALVVPGGYSPDHLRT
DMDMVRLVRTTFTAGKPVAAVCHGPWMLVEADAIDGKTVTSWPSLKTDLINAGARWVDREVVEDENVITSRKPDDLEAFS
EAILRHLGEEPRARTGDSAGAEQGAGI

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=168, Percent_Identity=45.8333333333333, Blast_Score=155, Evalue=1e-39,
Organism=Drosophila melanogaster, GI28571932, Length=157, Percent_Identity=31.2101910828025, Blast_Score=87, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 20699; Mature: 20568

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIAFIADDLFEDSELRVPWDRLRQAGHETVLVGLEKGKQIRGKKQRETFTTDVAARDV
CCEEEEEHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC
TAEDFDALVVPGGYSPDHLRTDMDMVRLVRTTFTAGKPVAAVCHGPWMLVEADAIDGKTV
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCEE
TSWPSLKTDLINAGARWVDREVVEDENVITSRKPDDLEAFSEAILRHLGEEPRARTGDSA
CCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
GAEQGAGI
CCCCCCCC
>Mature Secondary Structure 
ARIAFIADDLFEDSELRVPWDRLRQAGHETVLVGLEKGKQIRGKKQRETFTTDVAARDV
CEEEEEHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC
TAEDFDALVVPGGYSPDHLRTDMDMVRLVRTTFTAGKPVAAVCHGPWMLVEADAIDGKTV
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCEE
TSWPSLKTDLINAGARWVDREVVEDENVITSRKPDDLEAFSEAILRHLGEEPRARTGDSA
CCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
GAEQGAGI
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]