| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220918308
Identifier: 220918308
GI number: 220918308
Start: 3559541
End: 3560785
Strand: Direct
Name: 220918308
Synonym: A2cp1_3211
Alternate gene names: NA
Gene position: 3559541-3560785 (Clockwise)
Preceding gene: 220918304
Following gene: 220918311
Centisome position: 70.78
GC content: 81.61
Gene sequence:
>1245_bases GTGCGCACCGCCCTCCCCGCCGTGCTCGCCCTCTCGCTCGCCTGCGGAGGGGGCGGCCCCGCTCCTGCGCCGCCCTCCGC GAGCCCCCCGCCGCCGGCGGCGCCGGACCCGGTCCCCACGCCGCCGTCCGCCGCGCCCGCCGCCGCGCTCACCATCGAGC GGCTGGACGCGTCCGGCGAGTGCGCCGGCCTGGTGCCGGACGGTGCGCCCGAGCCGGTGATCCTCGCGCGCGCCGCGCCG GCGGACGCGACCTGCGGGGCGGCGCTGTCGGATGGGACCGGGCAGGTGGCCGCGGCGGCGCGCGACGCCGGCGGCACGAG CTGGCAGGTGTTCGACCCGGGCGGCGCGCCCGGGCGCACGTTCCGGGCCTGGCCGCTCCTGACGCAGCCCTCGGGCTGGC TCGGGCTGGCCCAGGACGACGCCGCCCCGGGCGGCCCGGCGGTGCGCGTCGTCGCGCTCGCGAGCGACGGCGCCGCGGCG GGCGCCGAGACCGTGTCCTCCGATCCGGCGCTGGCCGTGCTGCGCGGTGCGAGCCTGGCCGGCGATCCGTCCGGCGGCGC GCTGGCGCTGGTCGCCGACACCGCCGTCGCCGGCAACCACTGGAGCGCGCTCCACGCCCAGCGCTTCGACGCGGCCGGCG CGCCGCGCTGGGCCGAGCCGGCCCGCTTCGGCGCGCGCAGCGAGTCCGACGTGACGTTCCTGGTGGGCGGCGTCTCGCGC AGCGGCGAGGCGCTCGCGGTGTGGCAGCGCTCGGCCTGGGTGGACGTGGCCTGGCTGGACGGCGCCGGCGGCGCGCTCGC CGTGGGCGAGCTGGTCGAGCGCTCCGCCGACCTCACGGGCTCGAGCGCGCTCCGGCACGAGCTGGAGCTGGTGCCGCTGC TCGACGGCGGGCTCGCCCTGCGCGCCGACGGCGCGTTCCGGCGGGTCTACCCTCGGCTGGCCACCACCAGCGCGCCGCTC CCCGGGTGGCTGGCCGGCCGCGCCGGGTGGAGCCTGCGCTTCACGCGCGGCAACGCGGGCTACGCGCTGCTGCCGCCGCC CGGCGCGGCCGCGGCGGACTGCGCCCAGGCCATCGAGCTGCGCGCGCCCTCGGGGCGCCTGTGCGGGCGGATCTGGCTGC GCCGGCCGGGCGTCGGCGCCTGCACCACCGGCGCGGTGGACCAGGGCTGGGACGGCACGGTGTCGCAGCAGGACGCGCAG GGCGCCTGCAGCTGGCGCGTCTGGCCGCGGCTCCTGGCGCGCTGA
Upstream 100 bases:
>100_bases GTCCTAACCCGGCCGGCGTGCGCTCGCACCGCCCGGTTCGCCGCAGGCGGGGCGGGCAGGCGGGCAGGCGCGGGCGGGGC GGCGTGCCGAGATTCGGCCC
Downstream 100 bases:
>100_bases TCAGCGCAGCGACGCCATGATCTCCTCGAGCACCGCCGGCGGCGGCCGCACCCGCGCCTCCGGCAGCGTCGCCAGCGGCG CCTCCACCATCCGGAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MRTALPAVLALSLACGGGGPAPAPPSASPPPPAAPDPVPTPPSAAPAAALTIERLDASGECAGLVPDGAPEPVILARAAP ADATCGAALSDGTGQVAAAARDAGGTSWQVFDPGGAPGRTFRAWPLLTQPSGWLGLAQDDAAPGGPAVRVVALASDGAAA GAETVSSDPALAVLRGASLAGDPSGGALALVADTAVAGNHWSALHAQRFDAAGAPRWAEPARFGARSESDVTFLVGGVSR SGEALAVWQRSAWVDVAWLDGAGGALAVGELVERSADLTGSSALRHELELVPLLDGGLALRADGAFRRVYPRLATTSAPL PGWLAGRAGWSLRFTRGNAGYALLPPPGAAAADCAQAIELRAPSGRLCGRIWLRRPGVGACTTGAVDQGWDGTVSQQDAQ GACSWRVWPRLLAR
Sequences:
>Translated_414_residues MRTALPAVLALSLACGGGGPAPAPPSASPPPPAAPDPVPTPPSAAPAAALTIERLDASGECAGLVPDGAPEPVILARAAP ADATCGAALSDGTGQVAAAARDAGGTSWQVFDPGGAPGRTFRAWPLLTQPSGWLGLAQDDAAPGGPAVRVVALASDGAAA GAETVSSDPALAVLRGASLAGDPSGGALALVADTAVAGNHWSALHAQRFDAAGAPRWAEPARFGARSESDVTFLVGGVSR SGEALAVWQRSAWVDVAWLDGAGGALAVGELVERSADLTGSSALRHELELVPLLDGGLALRADGAFRRVYPRLATTSAPL PGWLAGRAGWSLRFTRGNAGYALLPPPGAAAADCAQAIELRAPSGRLCGRIWLRRPGVGACTTGAVDQGWDGTVSQQDAQ GACSWRVWPRLLAR >Mature_414_residues MRTALPAVLALSLACGGGGPAPAPPSASPPPPAAPDPVPTPPSAAPAAALTIERLDASGECAGLVPDGAPEPVILARAAP ADATCGAALSDGTGQVAAAARDAGGTSWQVFDPGGAPGRTFRAWPLLTQPSGWLGLAQDDAAPGGPAVRVVALASDGAAA GAETVSSDPALAVLRGASLAGDPSGGALALVADTAVAGNHWSALHAQRFDAAGAPRWAEPARFGARSESDVTFLVGGVSR SGEALAVWQRSAWVDVAWLDGAGGALAVGELVERSADLTGSSALRHELELVPLLDGGLALRADGAFRRVYPRLATTSAPL PGWLAGRAGWSLRFTRGNAGYALLPPPGAAAADCAQAIELRAPSGRLCGRIWLRRPGVGACTTGAVDQGWDGTVSQQDAQ GACSWRVWPRLLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41383; Mature: 41383
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTALPAVLALSLACGGGGPAPAPPSASPPPPAAPDPVPTPPSAAPAAALTIERLDASGE CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCC CAGLVPDGAPEPVILARAAPADATCGAALSDGTGQVAAAARDAGGTSWQVFDPGGAPGRT EEEECCCCCCCCEEEEECCCCCCCCCCEECCCCCCEEEEHHCCCCCEEEEECCCCCCCCC FRAWPLLTQPSGWLGLAQDDAAPGGPAVRVVALASDGAAAGAETVSSDPALAVLRGASLA EEEEEEEECCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCEEEEECCCCC GDPSGGALALVADTAVAGNHWSALHAQRFDAAGAPRWAEPARFGARSESDVTFLVGGVSR CCCCCCEEEEEEECEECCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEEECCCC SGEALAVWQRSAWVDVAWLDGAGGALAVGELVERSADLTGSSALRHELELVPLLDGGLAL CCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHEEEEEEEECCCEEE RADGAFRRVYPRLATTSAPLPGWLAGRAGWSLRFTRGNAGYALLPPPGAAAADCAQAIEL EECCCHHHHHHHHHCCCCCCCCCEECCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHEE RAPSGRLCGRIWLRRPGVGACTTGAVDQGWDGTVSQQDAQGACSWRVWPRLLAR CCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCC >Mature Secondary Structure MRTALPAVLALSLACGGGGPAPAPPSASPPPPAAPDPVPTPPSAAPAAALTIERLDASGE CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCC CAGLVPDGAPEPVILARAAPADATCGAALSDGTGQVAAAARDAGGTSWQVFDPGGAPGRT EEEECCCCCCCCEEEEECCCCCCCCCCEECCCCCCEEEEHHCCCCCEEEEECCCCCCCCC FRAWPLLTQPSGWLGLAQDDAAPGGPAVRVVALASDGAAAGAETVSSDPALAVLRGASLA EEEEEEEECCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCEEEEECCCCC GDPSGGALALVADTAVAGNHWSALHAQRFDAAGAPRWAEPARFGARSESDVTFLVGGVSR CCCCCCEEEEEEECEECCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEEECCCC SGEALAVWQRSAWVDVAWLDGAGGALAVGELVERSADLTGSSALRHELELVPLLDGGLAL CCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHEEEEEEEECCCEEE RADGAFRRVYPRLATTSAPLPGWLAGRAGWSLRFTRGNAGYALLPPPGAAAADCAQAIEL EECCCHHHHHHHHHCCCCCCCCCEECCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHEE RAPSGRLCGRIWLRRPGVGACTTGAVDQGWDGTVSQQDAQGACSWRVWPRLLAR CCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA