Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220918236
Identifier: 220918236
GI number: 220918236
Start: 3470225
End: 3471346
Strand: Direct
Name: 220918236
Synonym: A2cp1_3139
Alternate gene names: NA
Gene position: 3470225-3471346 (Clockwise)
Preceding gene: 220918231
Following gene: 220918239
Centisome position: 69.0
GC content: 82.0
Gene sequence:
>1122_bases ATGCCCTCCCACGGCCACCTGCTTCGCGTCGAGCCGCGTTCCCTCCCGCGCCCCGCGCTCGCGCTCGTCCCCCCTCCGGC CGGCGCCGGCGTCATCCGCCTCGGCCCGGACGAGCTGGTGGTGTTCACCACGCCCGGCGCCGCGGGCGGGGCCGCGCCCT GCCCGGCGGGGCCGCGCTTCCGCGGGTTGCGGGCGGTCCACGCGTGCTACGCGCCGGCCCCGAGCACCGAGGCGTGGCTG CGCGGCGTGCTCGACGCGCTCGTCGCGATGGCGCCGGGCGGGGGCGGCTGGTTCGCGCGCCTGGACGGGCTCGCCGCCGG GCGTGGCGCGGCGATCCTCGCGCCGGGCGGCGCGGCCGCGCGGCCGGACCTGGCCGGCGCCGAGCTGCTGCAGGAGGTCG GGGTCGAGTGCTACCGCGCGCTCTCGCAGCCCCGCCCACCGGTGGAGCTGCTCTCGCGGCGGCTCCGCGCGCTGCTGCCG CCGGCGGTGGAGCGCCGGGCGCTGGCGGCGCTCCTGCGGCACGGGATGGCCGACGCGCTGGTCCTCTCGGCCGGCGAGTT GGACGGGGTCGCGCTCACGCTGGGCCTGCGGCTCGAGCCAGGGGTGCGCCCGCCGTCGCGCACCGTGGGGCTGCTCCGCC ACGTGGCCGGGCACCTCGGCACCGCACGGCGGTTGCGCGGCGGGCTCGCGCCGGAGGCCGCGTGCAGCCGCCCGGCGCGC CGGAGCATCGCGCCGGCGGCGGTCGGCGCCCTCCGGCAGGCCGGGGCGGTCGTCCGGGAGGAGCCGGCGGCCGCCCTGCG GCGGTGGGGCGAGCTGCTGCGCGGCGAGTACGCGCTCGTCGATCACTGGCGCGAGGACGGCGCCGGCCACGTCCTGGCCC GCCGCTGCGACGAGCCGGGCGATCCGGCCGCGCTCCACCCGGTGGAGGGCGACGTGCTGCGGGCGGTGCTCGACGGGCTC GCGGCGCCGCAGGTCGGTGCGCTGCGCGCGGTGACCCGCGCGACCGTCTCCCTCCACCTCGCGAGCGCGCGCGCCCGGCT GCGCTGCGCCTCGCGGCGGGAGCTGCTGGCGCTGGCGGCGGCGTTCCCGGAGGCGATGGGCGCCGCGCCGGGCGCGCCCT GA
Upstream 100 bases:
>100_bases GAACGTTTCGTCACGATGCGGTCACGCGCGCGCCAACGTCGTGCGGCACCGTCACGCTCGCCCCCGCGGACCCTCGCGGC GGCCTTCGCCCGGAGCCCGC
Downstream 100 bases:
>100_bases GTCAACCCCGCGGCCCGGCCCCGCCGGAGAGCCACGCGCGCGCCGCGCCGGCCAGCAGGGGGAGCGCGCGCAGCGGCTCG TCCGCGGGCGGGGCCTCCCC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MPSHGHLLRVEPRSLPRPALALVPPPAGAGVIRLGPDELVVFTTPGAAGGAAPCPAGPRFRGLRAVHACYAPAPSTEAWL RGVLDALVAMAPGGGGWFARLDGLAAGRGAAILAPGGAAARPDLAGAELLQEVGVECYRALSQPRPPVELLSRRLRALLP PAVERRALAALLRHGMADALVLSAGELDGVALTLGLRLEPGVRPPSRTVGLLRHVAGHLGTARRLRGGLAPEAACSRPAR RSIAPAAVGALRQAGAVVREEPAAALRRWGELLRGEYALVDHWREDGAGHVLARRCDEPGDPAALHPVEGDVLRAVLDGL AAPQVGALRAVTRATVSLHLASARARLRCASRRELLALAAAFPEAMGAAPGAP
Sequences:
>Translated_373_residues MPSHGHLLRVEPRSLPRPALALVPPPAGAGVIRLGPDELVVFTTPGAAGGAAPCPAGPRFRGLRAVHACYAPAPSTEAWL RGVLDALVAMAPGGGGWFARLDGLAAGRGAAILAPGGAAARPDLAGAELLQEVGVECYRALSQPRPPVELLSRRLRALLP PAVERRALAALLRHGMADALVLSAGELDGVALTLGLRLEPGVRPPSRTVGLLRHVAGHLGTARRLRGGLAPEAACSRPAR RSIAPAAVGALRQAGAVVREEPAAALRRWGELLRGEYALVDHWREDGAGHVLARRCDEPGDPAALHPVEGDVLRAVLDGL AAPQVGALRAVTRATVSLHLASARARLRCASRRELLALAAAFPEAMGAAPGAP >Mature_372_residues PSHGHLLRVEPRSLPRPALALVPPPAGAGVIRLGPDELVVFTTPGAAGGAAPCPAGPRFRGLRAVHACYAPAPSTEAWLR GVLDALVAMAPGGGGWFARLDGLAAGRGAAILAPGGAAARPDLAGAELLQEVGVECYRALSQPRPPVELLSRRLRALLPP AVERRALAALLRHGMADALVLSAGELDGVALTLGLRLEPGVRPPSRTVGLLRHVAGHLGTARRLRGGLAPEAACSRPARR SIAPAAVGALRQAGAVVREEPAAALRRWGELLRGEYALVDHWREDGAGHVLARRCDEPGDPAALHPVEGDVLRAVLDGLA APQVGALRAVTRATVSLHLASARARLRCASRRELLALAAAFPEAMGAAPGAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38405; Mature: 38274
Theoretical pI: Translated: 11.38; Mature: 11.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSHGHLLRVEPRSLPRPALALVPPPAGAGVIRLGPDELVVFTTPGAAGGAAPCPAGPRF CCCCCCEEEECCCCCCCCCEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCH RGLRAVHACYAPAPSTEAWLRGVLDALVAMAPGGGGWFARLDGLAAGRGAAILAPGGAAA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEECCCCCC RPDLAGAELLQEVGVECYRALSQPRPPVELLSRRLRALLPPAVERRALAALLRHGMADAL CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHH VLSAGELDGVALTLGLRLEPGVRPPSRTVGLLRHVAGHLGTARRLRGGLAPEAACSRPAR EEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHH RSIAPAAVGALRQAGAVVREEPAAALRRWGELLRGEYALVDHWREDGAGHVLARRCDEPG HCCCHHHHHHHHHHCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCC DPAALHPVEGDVLRAVLDGLAAPQVGALRAVTRATVSLHLASARARLRCASRRELLALAA CCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFPEAMGAAPGAP HHHHHHCCCCCCC >Mature Secondary Structure PSHGHLLRVEPRSLPRPALALVPPPAGAGVIRLGPDELVVFTTPGAAGGAAPCPAGPRF CCCCCEEEECCCCCCCCCEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCH RGLRAVHACYAPAPSTEAWLRGVLDALVAMAPGGGGWFARLDGLAAGRGAAILAPGGAAA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEECCCCCC RPDLAGAELLQEVGVECYRALSQPRPPVELLSRRLRALLPPAVERRALAALLRHGMADAL CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHH VLSAGELDGVALTLGLRLEPGVRPPSRTVGLLRHVAGHLGTARRLRGGLAPEAACSRPAR EEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHH RSIAPAAVGALRQAGAVVREEPAAALRRWGELLRGEYALVDHWREDGAGHVLARRCDEPG HCCCHHHHHHHHHHCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCC DPAALHPVEGDVLRAVLDGLAAPQVGALRAVTRATVSLHLASARARLRCASRRELLALAA CCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFPEAMGAAPGAP HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA