| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918111
Identifier: 220918111
GI number: 220918111
Start: 3337295
End: 3338521
Strand: Direct
Name: 220918111
Synonym: A2cp1_3014
Alternate gene names: NA
Gene position: 3337295-3338521 (Clockwise)
Preceding gene: 220918110
Following gene: 220918112
Centisome position: 66.36
GC content: 70.66
Gene sequence:
>1227_bases ATGCTGTGCGCCTTCCTCGCGCTCGCGCTCAACGTGGGTCACCTGTTCTCGGTCCGAGGCGAGCTCCAGAACGCCTCGGA CGCCGGTGCGCTGGCAGGGGCCATCGAGCTCGACGGCAGGACTGCGAAGTTCGGCGCAGCCCGCGCCGTCGCTGCGAGCT ATGCGGCCGAGCACTTCACAGACAGCGGCACCGGCGTCGTGGCCGAAAGCGTGGAGCTCGGGCAGTGGGCCACGCCCAGC GAGGCGCCCTCCTGCGACCAGCGTGGTGATGCAAGCCCCGACGGGCACCGATTCTGCTTCGTGGACGACGCGGCGTTCGC GTCAGGGCTGCGCGTCAACGCGGTCCGGGTGGTGACCGCGCGCACCGGCGCGGCCGGCAGTGCCGGCGGCGGCGGGGTCG AGCTGTTCGCGGGCGGCATCATCGCGCCGAACGATGCGGATGGGCGGTCCACCGTGCGGGCGGCGGCCGTCGCGGTGTCC GGCGGACCGTGCGACCAGGGTTGCCCCACCCTGCCCATCGTCCTCCGGGCAGGGTGCCTCCGCCAGGCCGGCGGGCTCCG CTGCAATCCGCCTGCGACGTACTTCGTCGGGCTGAACCCGGCGCCCCGCGACTCCGCTGGTCTCACCGGCCTCGATCAGG GAACGGCCACCAGCCCGCCACCTCCCACGAACAGCCCGGCCGTATGCGACGTCGTGACGAGACCTCCCGGCTGCTCGGCG AACCTCAGCACAGGCGTGCCGATCTCGACCAGCAACGGGAACAACTGGACCTCGAACTGCACCGCCGGCTGCACGTACAA GAAGCCGGCGGACCCGACCGCGAATGGATGGGAACAGACGAAGAACGCGACCATCTGCGAGGCCCTCCGCTCGAAGATCG ACCGGGACTGCGACGGCCAGATCGACGCGACCCCGGTGATCGCGCAGGTCCCCGTGGTCGTCTACCCGGGCGAGGACGAG GACTCCTGCCCCGAGAACGCGCAGTACAACGGCACCGCGATCGTGGTCGGCTTCGCGACCATCCAGCTGGTGAGCGCGCG GTGCGACAAAGACTCGCCGTCCTCGAGCGTGTCGGCGCTCTGCGACGCGAAGATGGCGGACGCGAGCTACTCGGCCGACA TGTGCATGGCCTTCCAGTTCCTGTGCGAACAGCGCGACGACGAGGTCGCGAACGTTGGTTGCGGCTGGTTCGGGACTTCC CCGCTGCAGCCGGTGCTGGTGCGCTGA
Upstream 100 bases:
>100_bases GTCCCGAAGGAGTAGCGCCGTGAGTGCTCGTTCACGTCGTGGGGCGGGCGCGCGTGGGGATCGAGGCGCGACCGCCGTCC TGGTCGCGATCTGTCTGGTC
Downstream 100 bases:
>100_bases TGGGGGCGGGCGACGCACCATAGGGAGGACACTTGCGACAGGCCGTTTCGATCCCGGGGCTCCTCGAAGCTGGCGCGAAT CTCGGTCTGACAACCCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MLCAFLALALNVGHLFSVRGELQNASDAGALAGAIELDGRTAKFGAARAVAASYAAEHFTDSGTGVVAESVELGQWATPS EAPSCDQRGDASPDGHRFCFVDDAAFASGLRVNAVRVVTARTGAAGSAGGGGVELFAGGIIAPNDADGRSTVRAAAVAVS GGPCDQGCPTLPIVLRAGCLRQAGGLRCNPPATYFVGLNPAPRDSAGLTGLDQGTATSPPPPTNSPAVCDVVTRPPGCSA NLSTGVPISTSNGNNWTSNCTAGCTYKKPADPTANGWEQTKNATICEALRSKIDRDCDGQIDATPVIAQVPVVVYPGEDE DSCPENAQYNGTAIVVGFATIQLVSARCDKDSPSSSVSALCDAKMADASYSADMCMAFQFLCEQRDDEVANVGCGWFGTS PLQPVLVR
Sequences:
>Translated_408_residues MLCAFLALALNVGHLFSVRGELQNASDAGALAGAIELDGRTAKFGAARAVAASYAAEHFTDSGTGVVAESVELGQWATPS EAPSCDQRGDASPDGHRFCFVDDAAFASGLRVNAVRVVTARTGAAGSAGGGGVELFAGGIIAPNDADGRSTVRAAAVAVS GGPCDQGCPTLPIVLRAGCLRQAGGLRCNPPATYFVGLNPAPRDSAGLTGLDQGTATSPPPPTNSPAVCDVVTRPPGCSA NLSTGVPISTSNGNNWTSNCTAGCTYKKPADPTANGWEQTKNATICEALRSKIDRDCDGQIDATPVIAQVPVVVYPGEDE DSCPENAQYNGTAIVVGFATIQLVSARCDKDSPSSSVSALCDAKMADASYSADMCMAFQFLCEQRDDEVANVGCGWFGTS PLQPVLVR >Mature_408_residues MLCAFLALALNVGHLFSVRGELQNASDAGALAGAIELDGRTAKFGAARAVAASYAAEHFTDSGTGVVAESVELGQWATPS EAPSCDQRGDASPDGHRFCFVDDAAFASGLRVNAVRVVTARTGAAGSAGGGGVELFAGGIIAPNDADGRSTVRAAAVAVS GGPCDQGCPTLPIVLRAGCLRQAGGLRCNPPATYFVGLNPAPRDSAGLTGLDQGTATSPPPPTNSPAVCDVVTRPPGCSA NLSTGVPISTSNGNNWTSNCTAGCTYKKPADPTANGWEQTKNATICEALRSKIDRDCDGQIDATPVIAQVPVVVYPGEDE DSCPENAQYNGTAIVVGFATIQLVSARCDKDSPSSSVSALCDAKMADASYSADMCMAFQFLCEQRDDEVANVGCGWFGTS PLQPVLVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41617; Mature: 41617
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCAFLALALNVGHLFSVRGELQNASDAGALAGAIELDGRTAKFGAARAVAASYAAEHFT CHHHHHHHHHHHHHHEEEHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHC DSGTGVVAESVELGQWATPSEAPSCDQRGDASPDGHRFCFVDDAAFASGLRVNAVRVVTA CCCCEEEEECEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCEEEEEEEEEE RTGAAGSAGGGGVELFAGGIIAPNDADGRSTVRAAAVAVSGGPCDQGCPTLPIVLRAGCL ECCCCCCCCCCCEEEEECCEECCCCCCCHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHH RQAGGLRCNPPATYFVGLNPAPRDSAGLTGLDQGTATSPPPPTNSPAVCDVVTRPPGCSA HHCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC NLSTGVPISTSNGNNWTSNCTAGCTYKKPADPTANGWEQTKNATICEALRSKIDRDCDGQ CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCC IDATPVIAQVPVVVYPGEDEDSCPENAQYNGTAIVVGFATIQLVSARCDKDSPSSSVSAL CCCCCEEEECCEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHH CDAKMADASYSADMCMAFQFLCEQRDDEVANVGCGWFGTSPLQPVLVR HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCEECC >Mature Secondary Structure MLCAFLALALNVGHLFSVRGELQNASDAGALAGAIELDGRTAKFGAARAVAASYAAEHFT CHHHHHHHHHHHHHHEEEHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHC DSGTGVVAESVELGQWATPSEAPSCDQRGDASPDGHRFCFVDDAAFASGLRVNAVRVVTA CCCCEEEEECEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCEEEEEEEEEE RTGAAGSAGGGGVELFAGGIIAPNDADGRSTVRAAAVAVSGGPCDQGCPTLPIVLRAGCL ECCCCCCCCCCCEEEEECCEECCCCCCCHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHH RQAGGLRCNPPATYFVGLNPAPRDSAGLTGLDQGTATSPPPPTNSPAVCDVVTRPPGCSA HHCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC NLSTGVPISTSNGNNWTSNCTAGCTYKKPADPTANGWEQTKNATICEALRSKIDRDCDGQ CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCC IDATPVIAQVPVVVYPGEDEDSCPENAQYNGTAIVVGFATIQLVSARCDKDSPSSSVSAL CCCCCEEEECCEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHH CDAKMADASYSADMCMAFQFLCEQRDDEVANVGCGWFGTSPLQPVLVR HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA