The gene/protein map for NC_011891 is currently unavailable.
Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

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The map label for this gene is yhdF [H]

Identifier: 220918097

GI number: 220918097

Start: 3325069

End: 3325956

Strand: Direct

Name: yhdF [H]

Synonym: A2cp1_3000

Alternate gene names: 220918097

Gene position: 3325069-3325956 (Clockwise)

Preceding gene: 220918096

Following gene: 220918098

Centisome position: 66.11

GC content: 73.42

Gene sequence:

>888_bases
ATGGCGAAGGAGCGGAACCCCGACCCGCGGCAGGCCGGCGCGAAGCCGCCCTACCCGAAGCAGCAGCAGGAGACGCCCGG
CAGCGAGGCGGGGATGCGCCCGCGGCCGGACTTCGGCGAGCAGAGCTACCGCGGGCACGGGCGGCTGCAGGATCGCGTCG
CCATCGTGACGGGCGGTGACAGCGGCATCGGCCGCGCCGTGGCGCTCGCGTTCGCGCGCGAGGGCGCGCACGTGGTGATC
TCGTACCTGTCCGAGCACGAGGACGCCGAGGAGACGCGGCGCGTGGTGGAGGCGTCCGGGCGCACCGCGGCGCTGGTCGC
CGGTGATCTCTCCGAGGACGCGCAGTGCGCGCGCGTGGTGCAGGCGGCCATCGAGCGCTTCGGGCGGCTGGACGTGCTCG
TGAACAACGCCGCGTTCCAGGGGCGCGCCGTGCAGCGCTTCGAGGACCTCGACGCCGAGCGGGTGGCGCGCACCTTTCGC
GTCAACGTCGTCGCCATGTTCAACCTCACCCGCCACGCCCTGCCCCACCTGAAGCCCGGCGCCTCGATCGTCAACACCAC
CTCGATCCAGGCCTACCACCCCAACCCGCAGATCCTGGACTACGCCGCCACCAAGGGCGCCATCCGCACGTTCACCCAGG
GGCTCTCGAAGGAGCTCGCCGCGCGGGGGATCCGGGTGAACGGGGTCGCGCCCGGCCCGATCTGGACGCCGCTCATCCCG
CAGTCGTTCCCGGACGAGAAGGTGGAGAAGCACGGCGAGAGCGCGCCCATGGAGCGCGCCGGCCAGCCGGCCGAGGTCGC
GCCGGTGTTCGTGTTCCTCGCCTCCGACGACGCGCGGTACGTGAGCGGGGAGATCGTGGGGGTGACCGGGGGGTCGCCGC
TGGCGTAG

Upstream 100 bases:

>100_bases
GGGCGCCAAGGGGCAGTGGTACGTGGTCCCCGCGGCCTAGCCTCCCTCCCGCCGCCGCGCCCCGGCGCGCCCCGCCCTAG
CTTCTCGGGCAGGAGGCGCC

Downstream 100 bases:

>100_bases
GGGCGTGCGCCCCGCGAACACGGTACGGAGGTGGGACCCGCGCGCGCTTGCGGCACGCCCCCCGGCGGCGCGACAGTCGC
CGTCAGCGCGCGATGGCGAC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MAKERNPDPRQAGAKPPYPKQQQETPGSEAGMRPRPDFGEQSYRGHGRLQDRVAIVTGGDSGIGRAVALAFAREGAHVVI
SYLSEHEDAEETRRVVEASGRTAALVAGDLSEDAQCARVVQAAIERFGRLDVLVNNAAFQGRAVQRFEDLDAERVARTFR
VNVVAMFNLTRHALPHLKPGASIVNTTSIQAYHPNPQILDYAATKGAIRTFTQGLSKELAARGIRVNGVAPGPIWTPLIP
QSFPDEKVEKHGESAPMERAGQPAEVAPVFVFLASDDARYVSGEIVGVTGGSPLA

Sequences:

>Translated_295_residues
MAKERNPDPRQAGAKPPYPKQQQETPGSEAGMRPRPDFGEQSYRGHGRLQDRVAIVTGGDSGIGRAVALAFAREGAHVVI
SYLSEHEDAEETRRVVEASGRTAALVAGDLSEDAQCARVVQAAIERFGRLDVLVNNAAFQGRAVQRFEDLDAERVARTFR
VNVVAMFNLTRHALPHLKPGASIVNTTSIQAYHPNPQILDYAATKGAIRTFTQGLSKELAARGIRVNGVAPGPIWTPLIP
QSFPDEKVEKHGESAPMERAGQPAEVAPVFVFLASDDARYVSGEIVGVTGGSPLA
>Mature_294_residues
AKERNPDPRQAGAKPPYPKQQQETPGSEAGMRPRPDFGEQSYRGHGRLQDRVAIVTGGDSGIGRAVALAFAREGAHVVIS
YLSEHEDAEETRRVVEASGRTAALVAGDLSEDAQCARVVQAAIERFGRLDVLVNNAAFQGRAVQRFEDLDAERVARTFRV
NVVAMFNLTRHALPHLKPGASIVNTTSIQAYHPNPQILDYAATKGAIRTFTQGLSKELAARGIRVNGVAPGPIWTPLIPQ
SFPDEKVEKHGESAPMERAGQPAEVAPVFVFLASDDARYVSGEIVGVTGGSPLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=34.2629482071713, Blast_Score=127, Evalue=8e-30,
Organism=Homo sapiens, GI59889578, Length=231, Percent_Identity=34.6320346320346, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=36.6795366795367, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=30.4, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI5031737, Length=252, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI7706318, Length=247, Percent_Identity=27.9352226720648, Blast_Score=101, Evalue=8e-22,
Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=30, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI19923817, Length=263, Percent_Identity=27.7566539923954, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI40254992, Length=257, Percent_Identity=31.1284046692607, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI4504505, Length=239, Percent_Identity=29.2887029288703, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI4758504, Length=251, Percent_Identity=27.0916334661355, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI66933014, Length=264, Percent_Identity=30.3030303030303, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI33667109, Length=195, Percent_Identity=33.8461538461538, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI126723191, Length=186, Percent_Identity=30.6451612903226, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI31542939, Length=253, Percent_Identity=25.6916996047431, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI32455239, Length=180, Percent_Identity=30.5555555555556, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI5031765, Length=180, Percent_Identity=30.5555555555556, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI109715829, Length=257, Percent_Identity=27.2373540856031, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI20149619, Length=207, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI40254986, Length=201, Percent_Identity=28.8557213930348, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=29.8387096774194, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1789378, Length=279, Percent_Identity=52.6881720430108, Blast_Score=288, Evalue=4e-79,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=39.1836734693878, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788459, Length=248, Percent_Identity=35.8870967741936, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=32.1138211382114, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=31.0077519379845, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=31.3008130081301, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789208, Length=249, Percent_Identity=30.1204819277108, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=29.0983606557377, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=30.4, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI2367365, Length=247, Percent_Identity=29.5546558704453, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1787526, Length=239, Percent_Identity=30.1255230125523, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1786701, Length=218, Percent_Identity=28.8990825688073, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193204405, Length=268, Percent_Identity=35.8208955223881, Blast_Score=138, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=33.5820895522388, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17559104, Length=272, Percent_Identity=35.2941176470588, Blast_Score=128, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17531453, Length=267, Percent_Identity=32.9588014981273, Blast_Score=124, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=34.2205323193916, Blast_Score=123, Evalue=9e-29,
Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=33.4661354581673, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=33.8403041825095, Blast_Score=121, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=35.6275303643725, Blast_Score=120, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI17562910, Length=273, Percent_Identity=32.6007326007326, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17560150, Length=265, Percent_Identity=32.0754716981132, Blast_Score=118, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=32.5396825396825, Blast_Score=118, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=33.6, Blast_Score=118, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=32.9588014981273, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=30.7984790874525, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17562990, Length=265, Percent_Identity=33.2075471698113, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=31.3432835820896, Blast_Score=114, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=30.9701492537313, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=30.7692307692308, Blast_Score=107, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=34.412955465587, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17536025, Length=254, Percent_Identity=29.9212598425197, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=30.188679245283, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17536651, Length=254, Percent_Identity=29.9212598425197, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=29.6296296296296, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=29.1666666666667, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17538182, Length=247, Percent_Identity=33.1983805668016, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=29.6296296296296, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=30.5970149253731, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=27.5303643724696, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17561272, Length=255, Percent_Identity=28.6274509803922, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193203117, Length=229, Percent_Identity=27.9475982532751, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17567345, Length=199, Percent_Identity=29.1457286432161, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193203115, Length=225, Percent_Identity=28.4444444444444, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17568967, Length=248, Percent_Identity=26.2096774193548, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17564282, Length=191, Percent_Identity=31.413612565445, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71982365, Length=210, Percent_Identity=26.1904761904762, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17558628, Length=255, Percent_Identity=25.4901960784314, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17507613, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32563809, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=195, Percent_Identity=31.2820512820513, Blast_Score=83, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6323882, Length=204, Percent_Identity=30.3921568627451, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324126, Length=252, Percent_Identity=26.984126984127, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=34.9397590361446, Blast_Score=130, Evalue=9e-31,
Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=34.5381526104418, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=33.7349397590361, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=33.2, Blast_Score=124, Evalue=7e-29,
Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=33.6032388663968, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24639444, Length=254, Percent_Identity=36.2204724409449, Blast_Score=110, Evalue=9e-25,
Organism=Drosophila melanogaster, GI17737361, Length=262, Percent_Identity=28.2442748091603, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24643142, Length=253, Percent_Identity=32.8063241106719, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24644337, Length=193, Percent_Identity=31.0880829015544, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24580925, Length=221, Percent_Identity=29.4117647058824, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21357673, Length=200, Percent_Identity=27.5, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI18859837, Length=198, Percent_Identity=29.7979797979798, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21358495, Length=210, Percent_Identity=29.0476190476191, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31707; Mature: 31576

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MAKERNPDPRQAGAKPPYPKQQQETPGSEAGMRPRPDFGEQSYRGHGRLQDRVAIVTGGD
CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
SGIGRAVALAFAREGAHVVISYLSEHEDAEETRRVVEASGRTAALVAGDLSEDAQCARVV
CCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
QAAIERFGRLDVLVNNAAFQGRAVQRFEDLDAERVARTFRVNVVAMFNLTRHALPHLKPG
HHHHHHHCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHEEEEEEEHHHHHHCCCCCCC
ASIVNTTSIQAYHPNPQILDYAATKGAIRTFTQGLSKELAARGIRVNGVAPGPIWTPLIP
CCEEECCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCC
QSFPDEKVEKHGESAPMERAGQPAEVAPVFVFLASDDARYVSGEIVGVTGGSPLA
CCCCHHHHHHCCCCCCHHHCCCCCCCCEEEEEEECCCCEEECCEEEEECCCCCCC
>Mature Secondary Structure 
AKERNPDPRQAGAKPPYPKQQQETPGSEAGMRPRPDFGEQSYRGHGRLQDRVAIVTGGD
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
SGIGRAVALAFAREGAHVVISYLSEHEDAEETRRVVEASGRTAALVAGDLSEDAQCARVV
CCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
QAAIERFGRLDVLVNNAAFQGRAVQRFEDLDAERVARTFRVNVVAMFNLTRHALPHLKPG
HHHHHHHCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHEEEEEEEHHHHHHCCCCCCC
ASIVNTTSIQAYHPNPQILDYAATKGAIRTFTQGLSKELAARGIRVNGVAPGPIWTPLIP
CCEEECCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCC
QSFPDEKVEKHGESAPMERAGQPAEVAPVFVFLASDDARYVSGEIVGVTGGSPLA
CCCCHHHHHHCCCCCCHHHCCCCCCCCEEEEEEECCCCEEECCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]