| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yedW [C]
Identifier: 220918088
GI number: 220918088
Start: 3312797
End: 3313156
Strand: Direct
Name: yedW [C]
Synonym: A2cp1_2989
Alternate gene names: 220918088
Gene position: 3312797-3313156 (Clockwise)
Preceding gene: 220918084
Following gene: 220918089
Centisome position: 65.87
GC content: 73.61
Gene sequence:
>360_bases ATGACCGGGCCCCGCGTACTCGTGGTCGACGACAACGACGCGCTCCGCGAGAACGTCGCGGAGTGCCTCGAGGGCGAAGG CTACGCCGTCGACCTGGCGGGGGGCGGCGCGGCCGCGCTCGAGCTCCTCGAGCACGAGCCCCTGCCGGCCGTGATCATCC TGGACCTGATGATGCCGGGCATGGACGGCGGCGCGCTCGCGGCGGCCATCCGCGCCGACCCCCGCTGGGCGGGGATCCGC CTCGTCATCACCACCGGCCTCTCGGTGTCGCGGGTGCGCGAGCTCCCGGTGGACGCCGTCCTGATGAAGCCGTTCGGCGT GGACGAGCTGCTCGCCGTGCTGAAGCGCGTCGGAGCGTGA
Upstream 100 bases:
>100_bases CTCCAGGTATTTCGGGGGGCGGGACGTCCGGGTTTGCGCCCCGGATCGAGACCCCTTGCCCCGCCGGGGGGCTCCCGCTT AAGAAGCGTTCGAGCGTCCG
Downstream 100 bases:
>100_bases GCCGCCGCCGGTCAGCCCTGCGCGGGAGACGAACCGGGCGCATTGGCAAACCGGCGCGCCCGCGCCACCGTAGCGACTCG AGCCAGGAGGTGCGCCGGTG
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver Protein
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTGPRVLVVDDNDALRENVAECLEGEGYAVDLAGGGAAALELLEHEPLPAVIILDLMMPGMDGGALAAAIRADPRWAGIR LVITTGLSVSRVRELPVDAVLMKPFGVDELLAVLKRVGA
Sequences:
>Translated_119_residues MTGPRVLVVDDNDALRENVAECLEGEGYAVDLAGGGAAALELLEHEPLPAVIILDLMMPGMDGGALAAAIRADPRWAGIR LVITTGLSVSRVRELPVDAVLMKPFGVDELLAVLKRVGA >Mature_118_residues TGPRVLVVDDNDALRENVAECLEGEGYAVDLAGGGAAALELLEHEPLPAVIILDLMMPGMDGGALAAAIRADPRWAGIRL VITTGLSVSRVRELPVDAVLMKPFGVDELLAVLKRVGA
Specific function: Probable Member Of A Two-Component Regulatory System Yedw/Yedv. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12441; Mature: 12310
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPRVLVVDDNDALRENVAECLEGEGYAVDLAGGGAAALELLEHEPLPAVIILDLMMPG CCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCHHHHEEHHCCC MDGGALAAAIRADPRWAGIRLVITTGLSVSRVRELPVDAVLMKPFGVDELLAVLKRVGA CCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure TGPRVLVVDDNDALRENVAECLEGEGYAVDLAGGGAAALELLEHEPLPAVIILDLMMPG CCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCHHHHEEHHCCC MDGGALAAAIRADPRWAGIRLVITTGLSVSRVRELPVDAVLMKPFGVDELLAVLKRVGA CCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA