Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is expZ [H]
Identifier: 220918086
GI number: 220918086
Start: 3310794
End: 3312284
Strand: Reverse
Name: expZ [H]
Synonym: A2cp1_2987
Alternate gene names: 220918086
Gene position: 3312284-3310794 (Counterclockwise)
Preceding gene: 220918087
Following gene: 220918085
Centisome position: 65.86
GC content: 80.42
Gene sequence:
>1491_bases ATGCCTTCCGTCCGCCTCGAGCGGCTCTCGTTCTCGCACGCCGACGCCGCGCCCATCCTCGACGCCGTCGATCTCGTCTT CCCCACCGGCTGGACCGCGCTCGTGGGCGAGAACGGCGCCGGGAAGACCACGCTCCTCGAGCTCGTCGCGGGCCTGCGCG CACCCGACGCGGGCCGGATCCTGCTCGAGCCGGAGCCGGCGCGGGTGGTGCTGTGCCGGCAGGCGGTGGACGCGCCGGGG CCGGACGTGCCGGCGCTCGCCGCGCGAGACGACGGCGAGGCGCGCCGCCTGCGCGCGGCGCTCGCGCTCGACCCGGAGGC GCTCGCGCGCTGGACGACGCTGTCGCCGGGCGAGCGCAAGCGCTGGCAGGTGGGCGCGGCCCTGGCGGCCGAGCCGGACG TGCTGCTCCTCGACGAGCCGACCAACCACGCCGACGCGCAGGCGCGGGCGCTGCTCGCCGGCGCGCTCCGGCGCTTCGGC GGCGCGGGCGTGCTCGTGTCGCACGATCGCGCGCTGCTGGCGGCGCTGGCGGCGCGGACCGTGCGGCTCGGCCGCGGCGC GGCGCGCGCCTGGGCGCTCCCCTACGGCGCGGCGCGCGCGGCGTGGGAGGCCGAGTCGCGCGTGGCCTGGGACGCGCGGG CGGCCGCGCAGGAGGAGGGGCGCCGGGTCGAGCGGGCGCTCGCGGACGCGCGGCGCGCGCGCGACGCGGCGGACCGGGCG CGCAGCGGCCGGAAGCGCGATCCGAAGGACAGCGACGGCCGCACGCTGGGCGCGAAGACGCGCCGGGCCTGGGCCGAGGA CCGCCTCGGCGCGGACGTGCGCCGGCTGCGGTCCGCGGCGGAGCGCGCCCGCGAGGACGTGCCCGAGGCGCCGCCGCTCG CGGACCTGGGCGGGTCGGTGTTCCTGGGCTGGGAGCGGGCCCCGCGGCCGGTGCTGCTCGCGCTCGAGGCGGACGAGGTC CGCGCCGGGGAGGCGCCGCTGCTCCGCGACGTGCACCTGCGGCTCGGGCGCGAGGATCGCGTGTGGCTGTCCGGGCCGAA CGGCGCCGGGAAGTCCACGCTGCTCCGGGCGCTGCTCGCCGGCGCGGCGCTGCCGCCGGACCGGCTCCTATACCTGCCCC AGGAGCTGCCGGACGGCGAGGGGCCGCGGCTGCTGCGGGAGCTGGCCGGGCTGGAGCCGGCGGTGCGCGGCCGCGTCCTC TCGCTCGTGGCCGCGCTGGGCACCGACCCGGCGCGCCTGCTCGCCTCCGCGGCGCCGTCGCCGGGCGAGGCGCGCAAGCT GTTCCTGGCCATGGGCATGGGGCGGCACGCCTGGGCGCTGGTGCTGGACGAGCCCACCAACCACCTCGACCTGCCCACCG TGGAGCGGCTCGAGGCCGCGCTGGCGGCCTACCCGGGCGCGCTCCTGCTGGTCACGCACGACGAGGCGCTGGCGGCGCGC TGCACCGCGTCGCGCTGGCGCATCGCGTCGGGGAGGGTGGACGCCGCGTGA
Upstream 100 bases:
>100_bases TGCGGCGATGGAAACGATCTCCTAGCGAACCGGCAGCATCACCCGCCCACGCCGCCCGGCGCGCCCCTCGCGCGCGGGCG CTCGCTCCAGGAGCATCGCC
Downstream 100 bases:
>100_bases GGGGCGGTGCTTCCGCGGGGCCGGCGATTACAGCACGGGCGCGCCGGGTGTCCGGGCCGGGGGGCCCGCGCCGGGCGGGC GTCGCCGGTCCGGAGCTTCC
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MPSVRLERLSFSHADAAPILDAVDLVFPTGWTALVGENGAGKTTLLELVAGLRAPDAGRILLEPEPARVVLCRQAVDAPG PDVPALAARDDGEARRLRAALALDPEALARWTTLSPGERKRWQVGAALAAEPDVLLLDEPTNHADAQARALLAGALRRFG GAGVLVSHDRALLAALAARTVRLGRGAARAWALPYGAARAAWEAESRVAWDARAAAQEEGRRVERALADARRARDAADRA RSGRKRDPKDSDGRTLGAKTRRAWAEDRLGADVRRLRSAAERAREDVPEAPPLADLGGSVFLGWERAPRPVLLALEADEV RAGEAPLLRDVHLRLGREDRVWLSGPNGAGKSTLLRALLAGAALPPDRLLYLPQELPDGEGPRLLRELAGLEPAVRGRVL SLVAALGTDPARLLASAAPSPGEARKLFLAMGMGRHAWALVLDEPTNHLDLPTVERLEAALAAYPGALLLVTHDEALAAR CTASRWRIASGRVDAA
Sequences:
>Translated_496_residues MPSVRLERLSFSHADAAPILDAVDLVFPTGWTALVGENGAGKTTLLELVAGLRAPDAGRILLEPEPARVVLCRQAVDAPG PDVPALAARDDGEARRLRAALALDPEALARWTTLSPGERKRWQVGAALAAEPDVLLLDEPTNHADAQARALLAGALRRFG GAGVLVSHDRALLAALAARTVRLGRGAARAWALPYGAARAAWEAESRVAWDARAAAQEEGRRVERALADARRARDAADRA RSGRKRDPKDSDGRTLGAKTRRAWAEDRLGADVRRLRSAAERAREDVPEAPPLADLGGSVFLGWERAPRPVLLALEADEV RAGEAPLLRDVHLRLGREDRVWLSGPNGAGKSTLLRALLAGAALPPDRLLYLPQELPDGEGPRLLRELAGLEPAVRGRVL SLVAALGTDPARLLASAAPSPGEARKLFLAMGMGRHAWALVLDEPTNHLDLPTVERLEAALAAYPGALLLVTHDEALAAR CTASRWRIASGRVDAA >Mature_495_residues PSVRLERLSFSHADAAPILDAVDLVFPTGWTALVGENGAGKTTLLELVAGLRAPDAGRILLEPEPARVVLCRQAVDAPGP DVPALAARDDGEARRLRAALALDPEALARWTTLSPGERKRWQVGAALAAEPDVLLLDEPTNHADAQARALLAGALRRFGG AGVLVSHDRALLAALAARTVRLGRGAARAWALPYGAARAAWEAESRVAWDARAAAQEEGRRVERALADARRARDAADRAR SGRKRDPKDSDGRTLGAKTRRAWAEDRLGADVRRLRSAAERAREDVPEAPPLADLGGSVFLGWERAPRPVLLALEADEVR AGEAPLLRDVHLRLGREDRVWLSGPNGAGKSTLLRALLAGAALPPDRLLYLPQELPDGEGPRLLRELAGLEPAVRGRVLS LVAALGTDPARLLASAAPSPGEARKLFLAMGMGRHAWALVLDEPTNHLDLPTVERLEAALAAYPGALLLVTHDEALAARC TASRWRIASGRVDAA
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI69354671, Length=556, Percent_Identity=25.7194244604317, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI10947135, Length=558, Percent_Identity=25.089605734767, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI27881506, Length=513, Percent_Identity=24.3664717348928, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI10947137, Length=513, Percent_Identity=24.3664717348928, Blast_Score=92, Evalue=8e-19, Organism=Escherichia coli, GI1787182, Length=550, Percent_Identity=28.5454545454545, Blast_Score=133, Evalue=3e-32, Organism=Escherichia coli, GI2367384, Length=531, Percent_Identity=27.4952919020716, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1787041, Length=550, Percent_Identity=25.2727272727273, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789751, Length=529, Percent_Identity=26.6540642722117, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1787758, Length=188, Percent_Identity=28.7234042553192, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17559834, Length=564, Percent_Identity=22.1631205673759, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17555318, Length=508, Percent_Identity=24.2125984251968, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17553372, Length=183, Percent_Identity=32.7868852459016, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=185, Percent_Identity=29.1891891891892, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6325030, Length=172, Percent_Identity=35.4651162790698, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI24642252, Length=508, Percent_Identity=23.8188976377953, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI18859989, Length=508, Percent_Identity=23.8188976377953, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI24666836, Length=200, Percent_Identity=31, Blast_Score=88, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 52848; Mature: 52717
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVRLERLSFSHADAAPILDAVDLVFPTGWTALVGENGAGKTTLLELVAGLRAPDAGRI CCCCEEHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEE LLEPEPARVVLCRQAVDAPGPDVPALAARDDGEARRLRAALALDPEALARWTTLSPGERK EECCCCCCEEEEHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCC RWQVGAALAAEPDVLLLDEPTNHADAQARALLAGALRRFGGAGVLVSHDRALLAALAART CEECCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH VRLGRGAARAWALPYGAARAAWEAESRVAWDARAAAQEEGRRVERALADARRARDAADRA HHHCCCCHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSGRKRDPKDSDGRTLGAKTRRAWAEDRLGADVRRLRSAAERAREDVPEAPPLADLGGSV HCCCCCCCCCCCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCE FLGWERAPRPVLLALEADEVRAGEAPLLRDVHLRLGREDRVWLSGPNGAGKSTLLRALLA EEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH GAALPPDRLLYLPQELPDGEGPRLLRELAGLEPAVRGRVLSLVAALGTDPARLLASAAPS CCCCCHHHEEECHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCC PGEARKLFLAMGMGRHAWALVLDEPTNHLDLPTVERLEAALAAYPGALLLVTHDEALAAR CHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHH CTASRWRIASGRVDAA HHHHHEEEECCCCCCC >Mature Secondary Structure PSVRLERLSFSHADAAPILDAVDLVFPTGWTALVGENGAGKTTLLELVAGLRAPDAGRI CCCEEHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEE LLEPEPARVVLCRQAVDAPGPDVPALAARDDGEARRLRAALALDPEALARWTTLSPGERK EECCCCCCEEEEHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCC RWQVGAALAAEPDVLLLDEPTNHADAQARALLAGALRRFGGAGVLVSHDRALLAALAART CEECCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH VRLGRGAARAWALPYGAARAAWEAESRVAWDARAAAQEEGRRVERALADARRARDAADRA HHHCCCCHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSGRKRDPKDSDGRTLGAKTRRAWAEDRLGADVRRLRSAAERAREDVPEAPPLADLGGSV HCCCCCCCCCCCCCEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCE FLGWERAPRPVLLALEADEVRAGEAPLLRDVHLRLGREDRVWLSGPNGAGKSTLLRALLA EEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH GAALPPDRLLYLPQELPDGEGPRLLRELAGLEPAVRGRVLSLVAALGTDPARLLASAAPS CCCCCHHHEEECHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCC PGEARKLFLAMGMGRHAWALVLDEPTNHLDLPTVERLEAALAAYPGALLLVTHDEALAAR CHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHH CTASRWRIASGRVDAA HHHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Endonuclease; Excision [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]