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The map label for this gene is 220918081

Identifier: 220918081

GI number: 220918081

Start: 3304319

End: 3304885

Strand: Direct

Name: 220918081

Synonym: A2cp1_2982

Alternate gene names: NA

Gene position: 3304319-3304885 (Clockwise)

Preceding gene: 220918080

Following gene: 220918082

Centisome position: 65.7

GC content: 76.72

Gene sequence:

>567_bases
GTGGAGCTCGACGCGCGGGTGGCGGCGCTGCTGTCGACGGGAGACGCGGCGACGGCCGCGACCGAGGTGCTGCGCGCGCT
CGGCCCCGGTGTCCGGCGCTACCTGGCCTCCGTGCTCCGCGACGACGACGACGCCGCCGACGCGTACGCGCGCTTCGAGG
AGTCTCTGTGGCGCGCGCTGCCGGCCTTTCGCGGCGAGGCCGCGCTGCGGACCTGGGCGCTCCGGATCGCCTGGAGCGCC
GCCCGCCACGTGCGCGCCGAGGCGTGGCACCGACACCGCACGCGGCTGCGGACGCACGACGCCTCGGTCCTCCAGCAGAC
GCAGGGCGCCTCCGCGGCGCGCCACGAGGACCGCCGGCGGAAGCTCGAGCTGCTCCGCCGCGCGCTCAGCGACGAGGAGC
AGTCGATGCTCGCGCTGCGCGTCGATCAGGAGCTCCCCTGGCCGGAGATCGCGCGCGTGCTCTCGCCCGATGGGCGCCCG
CTCGACGTGGCAGTCCTGCAGAAGCGGTTCGAGCGCCTGCGCGCCCGCCTCGCACGCCTTGCCCGACGGGAGGGGCTCCT
CGACTGA

Upstream 100 bases:

>100_bases
CGCCTAGGTCGCCGGCGCGGGGTGGCCCGGTCGACCACCGCCCACGAGGGCCCGGCCGCCCGGCGCTCGGCGCCGGGCCC
GCGCCGCGGTAGACGGAGGC

Downstream 100 bases:

>100_bases
GGTGCCCGGTGCTAGCGTCCTGCACGACGCCGCACCGGGGGGCCCTCCATGCGCGAGCGAGGGGTGCGCGAACGCGCGGC
GGTGCCGCCGGGCGCGATCT

Product: ECF subfamily RNA polymerase sigma-24 subunit

Products: NA

Alternate protein names: Sigma-

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MELDARVAALLSTGDAATAATEVLRALGPGVRRYLASVLRDDDDAADAYARFEESLWRALPAFRGEAALRTWALRIAWSA
ARHVRAEAWHRHRTRLRTHDASVLQQTQGASAARHEDRRRKLELLRRALSDEEQSMLALRVDQELPWPEIARVLSPDGRP
LDVAVLQKRFERLRARLARLARREGLLD

Sequences:

>Translated_188_residues
MELDARVAALLSTGDAATAATEVLRALGPGVRRYLASVLRDDDDAADAYARFEESLWRALPAFRGEAALRTWALRIAWSA
ARHVRAEAWHRHRTRLRTHDASVLQQTQGASAARHEDRRRKLELLRRALSDEEQSMLALRVDQELPWPEIARVLSPDGRP
LDVAVLQKRFERLRARLARLARREGLLD
>Mature_188_residues
MELDARVAALLSTGDAATAATEVLRALGPGVRRYLASVLRDDDDAADAYARFEESLWRALPAFRGEAALRTWALRIAWSA
ARHVRAEAWHRHRTRLRTHDASVLQQTQGASAARHEDRRRKLELLRRALSDEEQSMLALRVDQELPWPEIARVLSPDGRP
LDVAVLQKRFERLRARLARLARREGLLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21384; Mature: 21384

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDARVAALLSTGDAATAATEVLRALGPGVRRYLASVLRDDDDAADAYARFEESLWRAL
CCCHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
PAFRGEAALRTWALRIAWSAARHVRAEAWHRHRTRLRTHDASVLQQTQGASAARHEDRRR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KLELLRRALSDEEQSMLALRVDQELPWPEIARVLSPDGRPLDVAVLQKRFERLRARLARL
HHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ARREGLLD
HHHCCCCC
>Mature Secondary Structure
MELDARVAALLSTGDAATAATEVLRALGPGVRRYLASVLRDDDDAADAYARFEESLWRAL
CCCHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
PAFRGEAALRTWALRIAWSAARHVRAEAWHRHRTRLRTHDASVLQQTQGASAARHEDRRR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KLELLRRALSDEEQSMLALRVDQELPWPEIARVLSPDGRPLDVAVLQKRFERLRARLARL
HHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ARREGLLD
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA