Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220918078
Identifier: 220918078
GI number: 220918078
Start: 3301767
End: 3302747
Strand: Reverse
Name: 220918078
Synonym: A2cp1_2979
Alternate gene names: NA
Gene position: 3302747-3301767 (Counterclockwise)
Preceding gene: 220918083
Following gene: 220918076
Centisome position: 65.67
GC content: 81.04
Gene sequence:
>981_bases ATGAGCGACGCCGACACCATCGTCAACCCACGCCGCGCTCCCCGCGCCCGCGTCCGCTGCGCCTGCAGGGTGTCCGCGCC GGCCGGCGTGCTCGACGCGGAGACCGAGGACCTCGGCCCGAGCGGCTGCCAGCTCCGCGCGGCCGGCGCGGTGGCCCGCG GCGAGGCGGTGCGGCTCGAGCTCTCGCACCCGCTGCTCGCGGCGCCGGTCGCGATCGCCGGCCGGGTCGCGTGGGCGAGC GCGCAGGCGCCGTGGCGGCTGGGGGTCGCGTTCGACGTGGCGGAGCTCGAGCGGGCCGGCCGCTGGTACCAGGCGCTCCT CGCGTCCAGCTCCGGGATCGGCCCGGGGCGCCGCCTGCCGGATCGCATCCCGCTCGACGCGACGATCTGGCTGGGCGCGC CGCCGCGGTTCGTGGATCTCGACCGGAGCGAGATCGCCATCCTGCGCGCGGTGGGCGACGGCGCCTCGCTGCGCAGCGTC GCGGGCGCGCTCGGGCCGCGGTGGCCGCAGGCGCGCCGGGCGCTGTTCTCGCTCCTCGCGCACCAGTACCTCACCTTCGC GCGCGGCGGCGCGACGAGGGCGCGGGACTGGGAGCGGACCCTGCTGCAGGCGGAGGTGGCGCTCACGCCCGAGGCGCCGG CCGCGATGGCCGCACCCGCACCCGCGGCCGCCGCTCCGGCGGCGGTGGGCGTGCCGGCGCGCGCCGCGGTGCGCGCCGCC GGCGGCGCTGCGGCCCCCGGCGCTCCGCCGGCCCGCTCGCCGGACTTCGTGGGCGCAGGGGTGGGCTGGCGCGGCGCAGC CGGGCGTCCCCGGCCGCCCGAGGCGGCCGAGTGCCTGGAGCGCGCGCGGGGCGAGCTGGCCGAGGGCAGGGTGCACGGGG CCATCGCGCTCCTTCGGCGCGCCCTGGCGGTCGCGCCCGGAGATCCGGAGATCGCGGGCGTCCTCGGGCGGCTCGCGTTC GACGGCCGTCGCAGCGCCTGA
Upstream 100 bases:
>100_bases CCCGTCCCGAGGGCGTGGGGCGTCCGTGTGCATGCGGCGCGGGAGTGTACCGTGACCCCGGGTTCGTGCGGCCGCTCGCG TTCGGATACCGTCCGGATCG
Downstream 100 bases:
>100_bases GCGGCCCGCGCCCGCACCCCGGCGCGCGGGAGCGCCCCGCGCCTCGGGCCGGGTCAGCGCCTGGCGCGATGCGCGCGCCG CATCGTCTCCGCCCAGCGCG
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSDADTIVNPRRAPRARVRCACRVSAPAGVLDAETEDLGPSGCQLRAAGAVARGEAVRLELSHPLLAAPVAIAGRVAWAS AQAPWRLGVAFDVAELERAGRWYQALLASSSGIGPGRRLPDRIPLDATIWLGAPPRFVDLDRSEIAILRAVGDGASLRSV AGALGPRWPQARRALFSLLAHQYLTFARGGATRARDWERTLLQAEVALTPEAPAAMAAPAPAAAAPAAVGVPARAAVRAA GGAAAPGAPPARSPDFVGAGVGWRGAAGRPRPPEAAECLERARGELAEGRVHGAIALLRRALAVAPGDPEIAGVLGRLAF DGRRSA
Sequences:
>Translated_326_residues MSDADTIVNPRRAPRARVRCACRVSAPAGVLDAETEDLGPSGCQLRAAGAVARGEAVRLELSHPLLAAPVAIAGRVAWAS AQAPWRLGVAFDVAELERAGRWYQALLASSSGIGPGRRLPDRIPLDATIWLGAPPRFVDLDRSEIAILRAVGDGASLRSV AGALGPRWPQARRALFSLLAHQYLTFARGGATRARDWERTLLQAEVALTPEAPAAMAAPAPAAAAPAAVGVPARAAVRAA GGAAAPGAPPARSPDFVGAGVGWRGAAGRPRPPEAAECLERARGELAEGRVHGAIALLRRALAVAPGDPEIAGVLGRLAF DGRRSA >Mature_325_residues SDADTIVNPRRAPRARVRCACRVSAPAGVLDAETEDLGPSGCQLRAAGAVARGEAVRLELSHPLLAAPVAIAGRVAWASA QAPWRLGVAFDVAELERAGRWYQALLASSSGIGPGRRLPDRIPLDATIWLGAPPRFVDLDRSEIAILRAVGDGASLRSVA GALGPRWPQARRALFSLLAHQYLTFARGGATRARDWERTLLQAEVALTPEAPAAMAAPAPAAAAPAAVGVPARAAVRAAG GAAAPGAPPARSPDFVGAGVGWRGAAGRPRPPEAAECLERARGELAEGRVHGAIALLRRALAVAPGDPEIAGVLGRLAFD GRRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33558; Mature: 33426
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDADTIVNPRRAPRARVRCACRVSAPAGVLDAETEDLGPSGCQLRAAGAVARGEAVRLE CCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEECCCEEEEE LSHPLLAAPVAIAGRVAWASAQAPWRLGVAFDVAELERAGRWYQALLASSSGIGPGRRLP ECCCHHHHHHHHHHHHHEECCCCCEEECEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCC DRIPLDATIWLGAPPRFVDLDRSEIAILRAVGDGASLRSVAGALGPRWPQARRALFSLLA CCCCCCEEEEECCCCCEEECCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHH HQYLTFARGGATRARDWERTLLQAEVALTPEAPAAMAAPAPAAAAPAAVGVPARAAVRAA HHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHC GGAAAPGAPPARSPDFVGAGVGWRGAAGRPRPPEAAECLERARGELAEGRVHGAIALLRR CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH ALAVAPGDPEIAGVLGRLAFDGRRSA HHHCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDADTIVNPRRAPRARVRCACRVSAPAGVLDAETEDLGPSGCQLRAAGAVARGEAVRLE CCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEECCCEEEEE LSHPLLAAPVAIAGRVAWASAQAPWRLGVAFDVAELERAGRWYQALLASSSGIGPGRRLP ECCCHHHHHHHHHHHHHEECCCCCEEECEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCC DRIPLDATIWLGAPPRFVDLDRSEIAILRAVGDGASLRSVAGALGPRWPQARRALFSLLA CCCCCCEEEEECCCCCEEECCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHH HQYLTFARGGATRARDWERTLLQAEVALTPEAPAAMAAPAPAAAAPAAVGVPARAAVRAA HHHHHHHCCCCCCHHHHHHHHHHHHEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHC GGAAAPGAPPARSPDFVGAGVGWRGAAGRPRPPEAAECLERARGELAEGRVHGAIALLRR CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH ALAVAPGDPEIAGVLGRLAFDGRRSA HHHCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA