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The map label for this gene is ycjS [H]

Identifier: 220918046

GI number: 220918046

Start: 3257952

End: 3259079

Strand: Direct

Name: ycjS [H]

Synonym: A2cp1_2947

Alternate gene names: 220918046

Gene position: 3257952-3259079 (Clockwise)

Preceding gene: 220918045

Following gene: 220918047

Centisome position: 64.78

GC content: 78.19

Gene sequence:

>1128_bases
ATGGCGGAACGAGATGGGGCCGCGGTGCGGGTGGCGGTGATCGGGTGCGGGCAGATCGCCGACGCGCACCTGGCGCAGGT
GCGCCGGGCCGGCGCCGAGGTGGTGGCGGTCTGCGACGCGACCCGGCACATGGCGGAGCAGGCCGCGGCGCGGTGGCGCG
TGCCGGCGTTCTACGAGGGGCCCGACGCGGTGGACGCGATGCTGGCGGAGGCGCGTCCGGAGGTGGTGCACGTCACCACT
CCGCCCGCGAGCCACCTCGCGCTCGCCACCCGCGCGCTCGCCGCGGGCGCGCACGTGTACGTGGAGAAGCCGGTCACGGT
GGACGCGGTCGAGGCGGTCGCGCTGGAGCAGGCGGCGGCCCGGCACGGCCGCCTGGCGTGCGCCGGCCACAACCTCCTGT
TCGATCCGGTGATCCAGCGGCTCCGCGCGCTGGTGGAGGCGGGCGCGCTCGGCGAGGTGGTCCACGCGGACGCGGTGATG
GGCTACGACCTCGCGGGCCCGTTCGGCGCGCTGCTCACCGCGGAGCCCGGCCACTGGATCCACCGCCTCCCCGCCGGCCT
GGCGCACAACAACCTCTCGCACCCGCTCTCGCTCGTGCTGCCGCTCCTCGGCCCGGGCACGCCCGCGGTCGCGCACGCGC
TCGGGCGCCGGCTGCGCCCGGAGCGCTTCGGCGACGCGCGCGACGCGTTCCACGACGAGCTGCGGATCCTGCTCGAGGGC
CCGCGCGCCACCGCGTCGGTGCTCTTCTCCTGCCGCATCCGGCCCGCGCAGCTCGCGCTCACCGTGTACGGCACGCGGCG
GGCCGTGCACGTCTCCCTGGACGCGCGCACGCTGCGCGTGGTGGAGGGCTCCCACCTGCCCGGCCCGTTCCAGAAGGTGG
ACTGGGCCCGGCGCGACGCCTCGGCCGCCGGGGCGGAGCTCCTGCGGCGCAGCGCCGACCTCGCGCTCGCGCGGCTGCAC
TACTTCGAGGGCATGCACCGGCTCTTCGCGGCCTTCTACCGGGCGGCGCGGACCGGCGGCCCCGCCCCCGTTCCGCTCGC
GGACGCGCGCGCGGTCGCCCAGGTGATCGACGCCGCGGCGGCGGCGTGCCGGCGGGCGGACGCCGCCGCGCAGGAGGCGT
GCGCGTGA

Upstream 100 bases:

>100_bases
TGATCCCGCGCGGCGGATGCCCCGCCGCGGCGCTGGCCGGGCCGAGGCGCGGTGAGGACCTCGAAGACGGCCGCCCCGCG
CGGCCAGGGGAAAGGGGACG

Downstream 100 bases:

>100_bases
GGGCGGTCACCGGCGCGACCGGGTTCCTGGGGCGCGAGATCGTGCGGAGCCTGCTGCGGCAGGGGGTGGATCGGATCCGC
TGCCTGGTGCGGCCCGGCAC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MAERDGAAVRVAVIGCGQIADAHLAQVRRAGAEVVAVCDATRHMAEQAAARWRVPAFYEGPDAVDAMLAEARPEVVHVTT
PPASHLALATRALAAGAHVYVEKPVTVDAVEAVALEQAAARHGRLACAGHNLLFDPVIQRLRALVEAGALGEVVHADAVM
GYDLAGPFGALLTAEPGHWIHRLPAGLAHNNLSHPLSLVLPLLGPGTPAVAHALGRRLRPERFGDARDAFHDELRILLEG
PRATASVLFSCRIRPAQLALTVYGTRRAVHVSLDARTLRVVEGSHLPGPFQKVDWARRDASAAGAELLRRSADLALARLH
YFEGMHRLFAAFYRAARTGGPAPVPLADARAVAQVIDAAAAACRRADAAAQEACA

Sequences:

>Translated_375_residues
MAERDGAAVRVAVIGCGQIADAHLAQVRRAGAEVVAVCDATRHMAEQAAARWRVPAFYEGPDAVDAMLAEARPEVVHVTT
PPASHLALATRALAAGAHVYVEKPVTVDAVEAVALEQAAARHGRLACAGHNLLFDPVIQRLRALVEAGALGEVVHADAVM
GYDLAGPFGALLTAEPGHWIHRLPAGLAHNNLSHPLSLVLPLLGPGTPAVAHALGRRLRPERFGDARDAFHDELRILLEG
PRATASVLFSCRIRPAQLALTVYGTRRAVHVSLDARTLRVVEGSHLPGPFQKVDWARRDASAAGAELLRRSADLALARLH
YFEGMHRLFAAFYRAARTGGPAPVPLADARAVAQVIDAAAAACRRADAAAQEACA
>Mature_374_residues
AERDGAAVRVAVIGCGQIADAHLAQVRRAGAEVVAVCDATRHMAEQAAARWRVPAFYEGPDAVDAMLAEARPEVVHVTTP
PASHLALATRALAAGAHVYVEKPVTVDAVEAVALEQAAARHGRLACAGHNLLFDPVIQRLRALVEAGALGEVVHADAVMG
YDLAGPFGALLTAEPGHWIHRLPAGLAHNNLSHPLSLVLPLLGPGTPAVAHALGRRLRPERFGDARDAFHDELRILLEGP
RATASVLFSCRIRPAQLALTVYGTRRAVHVSLDARTLRVVEGSHLPGPFQKVDWARRDASAAGAELLRRSADLALARLHY
FEGMHRLFAAFYRAARTGGPAPVPLADARAVAQVIDAAAAACRRADAAAQEACA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=147, Percent_Identity=34.0136054421769, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39644; Mature: 39513

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERDGAAVRVAVIGCGQIADAHLAQVRRAGAEVVAVCDATRHMAEQAAARWRVPAFYEG
CCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCEECC
PDAVDAMLAEARPEVVHVTTPPASHLALATRALAAGAHVYVEKPVTVDAVEAVALEQAAA
CHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH
RHGRLACAGHNLLFDPVIQRLRALVEAGALGEVVHADAVMGYDLAGPFGALLTAEPGHWI
HCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCHHH
HRLPAGLAHNNLSHPLSLVLPLLGPGTPAVAHALGRRLRPERFGDARDAFHDELRILLEG
HHCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHCC
PRATASVLFSCRIRPAQLALTVYGTRRAVHVSLDARTLRVVEGSHLPGPFQKVDWARRDA
CCHHHHHHHHCCCCHHHEEEEEEECCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHH
SAAGAELLRRSADLALARLHYFEGMHRLFAAFYRAARTGGPAPVPLADARAVAQVIDAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
AACRRADAAAQEACA
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
AERDGAAVRVAVIGCGQIADAHLAQVRRAGAEVVAVCDATRHMAEQAAARWRVPAFYEG
CCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCEECC
PDAVDAMLAEARPEVVHVTTPPASHLALATRALAAGAHVYVEKPVTVDAVEAVALEQAAA
CHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH
RHGRLACAGHNLLFDPVIQRLRALVEAGALGEVVHADAVMGYDLAGPFGALLTAEPGHWI
HCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCHHH
HRLPAGLAHNNLSHPLSLVLPLLGPGTPAVAHALGRRLRPERFGDARDAFHDELRILLEG
HHCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHCC
PRATASVLFSCRIRPAQLALTVYGTRRAVHVSLDARTLRVVEGSHLPGPFQKVDWARRDA
CCHHHHHHHHCCCCHHHEEEEEEECCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHH
SAAGAELLRRSADLALARLHYFEGMHRLFAAFYRAARTGGPAPVPLADARAVAQVIDAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
AACRRADAAAQEACA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]