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The map label for this gene is nusB

Identifier: 220918021

GI number: 220918021

Start: 3236590

End: 3237018

Strand: Reverse

Name: nusB

Synonym: A2cp1_2922

Alternate gene names: 220918021

Gene position: 3237018-3236590 (Counterclockwise)

Preceding gene: 220918022

Following gene: 220918020

Centisome position: 64.36

GC content: 71.79

Gene sequence:

>429_bases
GTGACGTCGCGGCGGACCAGGGCCCGGGAGCGCGCGCTGCAGGCGCTCTACCAGATCGACGTCGCGGCCGAGGGCATCGA
CGACGCCCTCTCCCGCTTCTGGAAGAGCTTCGAGCCGGTCGAGCGCGAGGTGATGGACCTCGCCGAGGGGCTGGTGCGCG
GCGTGGCCCAGCACCGGCGCGCGGTGGACGAGGCCATCGAGGCGGTCTCCACCAACTGGCGCCTCGACCGGATGGCCAAG
GTGGACCGGAACGTGCTGCGGCTGGCGGTCTTCGAGCTGCTGCGCACCGACGTGCCAGTGAAGGTGGTGATCAACGAGGC
CATCGAGCTCGGGAAGAAGTACGGCTCCGAGAGCTCGGGCGCGTTCGTGAACGGCGTCCTCGACAAGGTGGCGAGCGGCC
TGCCGCCCGCGCGCCGCGGCGAGCGGTGA

Upstream 100 bases:

>100_bases
AGGCGGGCAACAAGGGCGCCGACGCCGCGGCCGCGGCGGTGGAGCAGGCCAACGTGCTGCGCGCGATCGCGCGCGCCCCC
GCGCGGAAGGCGGAGTGACG

Downstream 100 bases:

>100_bases
GGGGCGAGGCGTGACGCTCAAGATCGAGGTGGCAGAGCTGGGCCTGCAGGCCATCGACGCGCTCGACGTGGACGCGCTGT
GCGTCTTCGTCGGGCCGGAG

Product: NusB antitermination factor

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTSRRTRARERALQALYQIDVAAEGIDDALSRFWKSFEPVEREVMDLAEGLVRGVAQHRRAVDEAIEAVSTNWRLDRMAK
VDRNVLRLAVFELLRTDVPVKVVINEAIELGKKYGSESSGAFVNGVLDKVASGLPPARRGER

Sequences:

>Translated_142_residues
MTSRRTRARERALQALYQIDVAAEGIDDALSRFWKSFEPVEREVMDLAEGLVRGVAQHRRAVDEAIEAVSTNWRLDRMAK
VDRNVLRLAVFELLRTDVPVKVVINEAIELGKKYGSESSGAFVNGVLDKVASGLPPARRGER
>Mature_141_residues
TSRRTRARERALQALYQIDVAAEGIDDALSRFWKSFEPVEREVMDLAEGLVRGVAQHRRAVDEAIEAVSTNWRLDRMAKV
DRNVLRLAVFELLRTDVPVKVVINEAIELGKKYGSESSGAFVNGVLDKVASGLPPARRGER

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=131, Percent_Identity=38.9312977099237, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_ANAD2 (B8JEW3)

Other databases:

- EMBL:   CP001359
- RefSeq:   YP_002493325.1
- ProteinModelPortal:   B8JEW3
- SMR:   B8JEW3
- GeneID:   7299853
- GenomeReviews:   CP001359_GR
- KEGG:   acp:A2cp1_2922
- HOGENOM:   HBG734409
- ProtClustDB:   CLSK946383
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 15905; Mature: 15774

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRRTRARERALQALYQIDVAAEGIDDALSRFWKSFEPVEREVMDLAEGLVRGVAQHRR
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AVDEAIEAVSTNWRLDRMAKVDRNVLRLAVFELLRTDVPVKVVINEAIELGKKYGSESSG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
AFVNGVLDKVASGLPPARRGER
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TSRRTRARERALQALYQIDVAAEGIDDALSRFWKSFEPVEREVMDLAEGLVRGVAQHRR
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AVDEAIEAVSTNWRLDRMAKVDRNVLRLAVFELLRTDVPVKVVINEAIELGKKYGSESSG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
AFVNGVLDKVASGLPPARRGER
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA