Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is cheW [H]
Identifier: 220918016
GI number: 220918016
Start: 3231633
End: 3232172
Strand: Reverse
Name: cheW [H]
Synonym: A2cp1_2917
Alternate gene names: 220918016
Gene position: 3232172-3231633 (Counterclockwise)
Preceding gene: 220918017
Following gene: 220918015
Centisome position: 64.27
GC content: 78.15
Gene sequence:
>540_bases GTGGCGGCGCCTGAGGCGGCCGCGCCGGAGGGCGCGCGGGTCCAGCTCTGCACGTTCCGCGTCGGCGGCGAGGACTACGC CATCGACATCATGCGGGTCCGCGAGATCATTCCCCCGCAGCCCGTCACGCCGGTGCCGCGCGCGCCCGCGTTCGTGGAGG GCGTGTTCCACCTGCGCGACGAGGTGATCCCGGTGGTGGACGTCCGGCGCCGCTTCGGGCTGCCCATCGGGCCGCCCACC CGGCGCACGCGCTTCCTGGTGGTGAACGTGGCCCGGCGGCGCATCGGGCTGGTGGTGGACGAGGTGTGCGAGGTCCTGCG CCTGCCCCGGCACGCGCTCCGCCCGGCCCCGGCGCTGGTGGCGGATGGGGGGCCGCGCTTCTTCCTGGGCGTGTGCGGCG GCGACGGGAGGCCCGGCGGCCGCCGCGGGGGGCCGGCGCGGCTCCGGCTCCTGCTCGACGTGAAGGCGCTGCTCGACCCG GTGGTGCCGGGCGAGGCGGCCGCAGCCAGGGCCCAGGCCGAGGCCTCGAGGCGCGCATGA
Upstream 100 bases:
>100_bases GGGATCGGGCGGGAGCGCGACCGGCTGTTCACCGTGATCGATCCGGCCGCGCTGGTGCGCCGCTCGCTGGCGGCGCCGCG CCGCGCCGAGGGGGGCCAGG
Downstream 100 bases:
>100_bases CCGCTCCCGACCCGCACGGCCGGGCACGCTCCGGCGACGAGGAGCTCCGCTACCGCGCCACCTGCGAGCTGGATCCGGCC GCGCCGGCCGAGCTGGCGGT
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAAPEAAAPEGARVQLCTFRVGGEDYAIDIMRVREIIPPQPVTPVPRAPAFVEGVFHLRDEVIPVVDVRRRFGLPIGPPT RRTRFLVVNVARRRIGLVVDEVCEVLRLPRHALRPAPALVADGGPRFFLGVCGGDGRPGGRRGGPARLRLLLDVKALLDP VVPGEAAAARAQAEASRRA
Sequences:
>Translated_179_residues MAAPEAAAPEGARVQLCTFRVGGEDYAIDIMRVREIIPPQPVTPVPRAPAFVEGVFHLRDEVIPVVDVRRRFGLPIGPPT RRTRFLVVNVARRRIGLVVDEVCEVLRLPRHALRPAPALVADGGPRFFLGVCGGDGRPGGRRGGPARLRLLLDVKALLDP VVPGEAAAARAQAEASRRA >Mature_178_residues AAPEAAAPEGARVQLCTFRVGGEDYAIDIMRVREIIPPQPVTPVPRAPAFVEGVFHLRDEVIPVVDVRRRFGLPIGPPTR RTRFLVVNVARRRIGLVVDEVCEVLRLPRHALRPAPALVADGGPRFFLGVCGGDGRPGGRRGGPARLRLLLDVKALLDPV VPGEAAAARAQAEASRRA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=156, Percent_Identity=32.0512820512821, Blast_Score=87, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 19278; Mature: 19147
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPEAAAPEGARVQLCTFRVGGEDYAIDIMRVREIIPPQPVTPVPRAPAFVEGVFHLRD CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH EVIPVVDVRRRFGLPIGPPTRRTRFLVVNVARRRIGLVVDEVCEVLRLPRHALRPAPALV HCCCHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEE ADGGPRFFLGVCGGDGRPGGRRGGPARLRLLLDVKALLDPVVPGEAAAARAQAEASRRA ECCCCEEEEEEECCCCCCCCCCCCHHHHHHHEEHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AAPEAAAPEGARVQLCTFRVGGEDYAIDIMRVREIIPPQPVTPVPRAPAFVEGVFHLRD CCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH EVIPVVDVRRRFGLPIGPPTRRTRFLVVNVARRRIGLVVDEVCEVLRLPRHALRPAPALV HCCCHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEE ADGGPRFFLGVCGGDGRPGGRRGGPARLRLLLDVKALLDPVVPGEAAAARAQAEASRRA ECCCCEEEEEEECCCCCCCCCCCCHHHHHHHEEHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]