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The map label for this gene is ybhP [H]

Identifier: 220917964

GI number: 220917964

Start: 3168115

End: 3168900

Strand: Direct

Name: ybhP [H]

Synonym: A2cp1_2865

Alternate gene names: 220917964

Gene position: 3168115-3168900 (Clockwise)

Preceding gene: 220917963

Following gene: 220917965

Centisome position: 62.99

GC content: 78.24

Gene sequence:

>786_bases
GTGCGCTTCCGCGTGGTCACCTGGAACGTGCACGGCCTGCGCGGCGCGGGCCGCCGCCCCGATCCCGAGCGCATCGCCCG
CGTGCTCGACGACATCGGCGCCGACGTGGCGGGGCTGCAGGAGGTCGGCGCGAGGCTCCCGGGCGCCGACGCGCACGCCG
CCGAGGCGCTCGCGCGCCTCACCGGCCTGAACGGCGCGTTCGGCCCGACGCTCCAGCACGCGCGCGGCTTCGCGTACGGC
AACGCCATCCTCTCCCGCCACCCCATCGACGCGACGCGCACCTACGACCTGTCGGTGCCCGGACGCGAGCCACGCGGCTG
CCTGCGCGCCGATCTCGACCTCGGCCCGATGCGCGTCCACGTGTTCGCCGCCCACCTCGGCCTGCACTGGCGCGAGCGGC
GGCGCCAGGCGGCCGCCCTGCTGTCGGCGGACATCCTGCGCGACGCCGCGCTCTCCCATCCCCTGGTGCTGGTGGGGGAC
TTCAACTCGCCCTCCGACCGCTCGGCGGTCCCGCGCTGGCTGCGCCGCACGCTCACCGACTGCGCCGTCGCGGCCGGCCG
CCCCGCCGCCACGTTCCCGTCCGCCTGGCCGCTCCTGCGGCTCGACCGCGCCTACGTGGACGCCGCGCTGCGCGTCCTCG
CCTGCGAGGTGATCCGGACGCCGCTCGCCCGCCGGGCCTCGGACCACCTGCCGCTCGTCGTCGAGCTGGAGCTCACCGAG
GCCGCGCGCCGTCCGCCCGCCCCGCGGCCGGTCGAGGCGCCTGGCGTCCGGACGCGGACCGGGTGA

Upstream 100 bases:

>100_bases
GGGTGCGCCGCCGGCGCGCGCGCCCCACCTTGCGCCCGTGGCGCGCGGCCGGCGTGCCCGGCCCCGGGCCGGGCGCCGCG
CGGAGGGAGGGCGGGCGGGG

Downstream 100 bases:

>100_bases
TCGCGCCGGCGACGGCGCGCGACCGCGTGTCCGGCCTCGGGGCCTCGATCGCGCCCCGCTCGATGCGCAGGCTGTGACGC
GGGCCCGGGAGCGGGCGGGA

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRFRVVTWNVHGLRGAGRRPDPERIARVLDDIGADVAGLQEVGARLPGADAHAAEALARLTGLNGAFGPTLQHARGFAYG
NAILSRHPIDATRTYDLSVPGREPRGCLRADLDLGPMRVHVFAAHLGLHWRERRRQAAALLSADILRDAALSHPLVLVGD
FNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWPLLRLDRAYVDAALRVLACEVIRTPLARRASDHLPLVVELELTE
AARRPPAPRPVEAPGVRTRTG

Sequences:

>Translated_261_residues
MRFRVVTWNVHGLRGAGRRPDPERIARVLDDIGADVAGLQEVGARLPGADAHAAEALARLTGLNGAFGPTLQHARGFAYG
NAILSRHPIDATRTYDLSVPGREPRGCLRADLDLGPMRVHVFAAHLGLHWRERRRQAAALLSADILRDAALSHPLVLVGD
FNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWPLLRLDRAYVDAALRVLACEVIRTPLARRASDHLPLVVELELTE
AARRPPAPRPVEAPGVRTRTG
>Mature_261_residues
MRFRVVTWNVHGLRGAGRRPDPERIARVLDDIGADVAGLQEVGARLPGADAHAAEALARLTGLNGAFGPTLQHARGFAYG
NAILSRHPIDATRTYDLSVPGREPRGCLRADLDLGPMRVHVFAAHLGLHWRERRRQAAALLSADILRDAALSHPLVLVGD
FNSPSDRSAVPRWLRRTLTDCAVAAGRPAATFPSAWPLLRLDRAYVDAALRVLACEVIRTPLARRASDHLPLVVELELTE
AARRPPAPRPVEAPGVRTRTG

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=252, Percent_Identity=34.9206349206349, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 28368; Mature: 28368

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRVVTWNVHGLRGAGRRPDPERIARVLDDIGADVAGLQEVGARLPGADAHAAEALARL
CEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHH
TGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGREPRGCLRADLDLGPMRVH
HCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEECCCCCCHHHH
VFAAHLGLHWRERRRQAAALLSADILRDAALSHPLVLVGDFNSPSDRSAVPRWLRRTLTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHH
CAVAAGRPAATFPSAWPLLRLDRAYVDAALRVLACEVIRTPLARRASDHLPLVVELELTE
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHH
AARRPPAPRPVEAPGVRTRTG
HHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFRVVTWNVHGLRGAGRRPDPERIARVLDDIGADVAGLQEVGARLPGADAHAAEALARL
CEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHH
TGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGREPRGCLRADLDLGPMRVH
HCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEECCCCCCHHHH
VFAAHLGLHWRERRRQAAALLSADILRDAALSHPLVLVGDFNSPSDRSAVPRWLRRTLTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHH
CAVAAGRPAATFPSAWPLLRLDRAYVDAALRVLACEVIRTPLARRASDHLPLVVELELTE
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHH
AARRPPAPRPVEAPGVRTRTG
HHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]