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The map label for this gene is ywqD [H]

Identifier: 220917929

GI number: 220917929

Start: 3129082

End: 3129834

Strand: Reverse

Name: ywqD [H]

Synonym: A2cp1_2830

Alternate gene names: 220917929

Gene position: 3129834-3129082 (Counterclockwise)

Preceding gene: 220917930

Following gene: 220917928

Centisome position: 62.23

GC content: 80.08

Gene sequence:

>753_bases
ATGATCCCCGCCGAGACGCTGAACGCCGCCTTTCCGACCCTCGCGCCGGAGAGCCGCCTGGTCGCGCTCGACGCGCCCGC
CTCGGCGGCCGCGGAGCAGTACCGCGTCCTGTACCAGCGCCTGCTCCGCCTGGCCGCGCGCCGGCCGATGCGCGTGCTGG
CGATCACCTCCGCCGGCCGCGGCGAGGGGCGGACCACCACCGCCGCCAACCTGGCGCTCACCGCCGCGCAGGAGGGGCGC
GCGACGGTGCTGGTCGAGGCCGACCTGCGCCGGCCGGTGCTGGCGGCGCGGTTCGGGCTGGCGCCGCGGGCCGGGCTGGC
CGAGGTCCTGGAGGGCGCCGCCGAGCTGGCGCAGGCGGTGGTGCGGGTCGGCCCGCTGGCGGTGCTGTGCGCCGGCGATC
CGCGGGATCCGGCCCAGGCGCTGCGGAGCCCGCGCGCCGTCGCGATCATGGAGCAGCTCCGCGCCGCCTACGAGCACGTC
ATCCTCGACGCGCCGCCGGCGCTGGCCGGCGCGGACGGCGACCGCCTGGTGCAGGCGGCCGACGCGGCCCTGCTGGTGGT
GCGCTCGGGGGCCACGCCGCGCCAGGTGGTGCGGCTCGCGCTCGACGCGCTGGGCGAGCGCGCCGCCGGCGTGGTGCTGA
ACGCCGTGGACGCCGGCGCGGTGGCGCACGGGCGCTGGATCTACGGGGACGCGTCCGCGGTCGCGCCGCCGCCCGTGCCG
GTGCCCGAGGTCCGGCGCGCAGAGCCGCTGTGA

Upstream 100 bases:

>100_bases
CCGGAGGACGCGGCCGCGCTGGGCGTGCCGGTCCTCGCCGCCATCCCGCGCATCGGTCCCCGCAGCCACGCGTCGTGAAC
CCCTCACCGGAGCGAACGCC

Downstream 100 bases:

>100_bases
CCGCCGCCGCGCTGGTCGGGGTGGATCGCGAGGTGGGGGGCGGCGCCGGCCCGGCGTTCGCGGGCGGCTTCGCGCTCGCG
GTCGCGCTGGCGGTCGCCGT

Product: capsular exopolysaccharide family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIPAETLNAAFPTLAPESRLVALDAPASAAAEQYRVLYQRLLRLAARRPMRVLAITSAGRGEGRTTTAANLALTAAQEGR
ATVLVEADLRRPVLAARFGLAPRAGLAEVLEGAAELAQAVVRVGPLAVLCAGDPRDPAQALRSPRAVAIMEQLRAAYEHV
ILDAPPALAGADGDRLVQAADAALLVVRSGATPRQVVRLALDALGERAAGVVLNAVDAGAVAHGRWIYGDASAVAPPPVP
VPEVRRAEPL

Sequences:

>Translated_250_residues
MIPAETLNAAFPTLAPESRLVALDAPASAAAEQYRVLYQRLLRLAARRPMRVLAITSAGRGEGRTTTAANLALTAAQEGR
ATVLVEADLRRPVLAARFGLAPRAGLAEVLEGAAELAQAVVRVGPLAVLCAGDPRDPAQALRSPRAVAIMEQLRAAYEHV
ILDAPPALAGADGDRLVQAADAALLVVRSGATPRQVVRLALDALGERAAGVVLNAVDAGAVAHGRWIYGDASAVAPPPVP
VPEVRRAEPL
>Mature_250_residues
MIPAETLNAAFPTLAPESRLVALDAPASAAAEQYRVLYQRLLRLAARRPMRVLAITSAGRGEGRTTTAANLALTAAQEGR
ATVLVEADLRRPVLAARFGLAPRAGLAEVLEGAAELAQAVVRVGPLAVLCAGDPRDPAQALRSPRAVAIMEQLRAAYEHV
ILDAPPALAGADGDRLVQAADAALLVVRSGATPRQVVRLALDALGERAAGVVLNAVDAGAVAHGRWIYGDASAVAPPPVP
VPEVRRAEPL

Specific function: May be involved in the regulation of capsular polysaccharide biosynthesis. Autophosphorylates in vitro. Phosphorylates and activates in vitro two UDP-glucose dehydrogenases, YwqF and TuaD, as well as the DNA-binding proteins Ssb and SsbB [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI1787216, Length=203, Percent_Identity=30.5418719211823, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87082032, Length=219, Percent_Identity=25.1141552511416, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 25883; Mature: 25883

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPAETLNAAFPTLAPESRLVALDAPASAAAEQYRVLYQRLLRLAARRPMRVLAITSAGR
CCCCHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
GEGRTTTAANLALTAAQEGRATVLVEADLRRPVLAARFGLAPRAGLAEVLEGAAELAQAV
CCCCCCHHHHEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VRVGPLAVLCAGDPRDPAQALRSPRAVAIMEQLRAAYEHVILDAPPALAGADGDRLVQAA
HHHCCEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHH
DAALLVVRSGATPRQVVRLALDALGERAAGVVLNAVDAGAVAHGRWIYGDASAVAPPPVP
CEEEEEEECCCCHHHHHHHHHHHHCCHHHHHEEECCCCCCEECCCEEECCCCCCCCCCCC
VPEVRRAEPL
CCCCCCCCCC
>Mature Secondary Structure
MIPAETLNAAFPTLAPESRLVALDAPASAAAEQYRVLYQRLLRLAARRPMRVLAITSAGR
CCCCHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
GEGRTTTAANLALTAAQEGRATVLVEADLRRPVLAARFGLAPRAGLAEVLEGAAELAQAV
CCCCCCHHHHEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VRVGPLAVLCAGDPRDPAQALRSPRAVAIMEQLRAAYEHVILDAPPALAGADGDRLVQAA
HHHCCEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHH
DAALLVVRSGATPRQVVRLALDALGERAAGVVLNAVDAGAVAHGRWIYGDASAVAPPPVP
CEEEEEEECCCCHHHHHHHHHHHHCCHHHHHEEECCCCCCEECCCEEECCCCCCCCCCCC
VPEVRRAEPL
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]