Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917835
Identifier: 220917835
GI number: 220917835
Start: 3018322
End: 3018984
Strand: Reverse
Name: 220917835
Synonym: A2cp1_2736
Alternate gene names: NA
Gene position: 3018984-3018322 (Counterclockwise)
Preceding gene: 220917836
Following gene: 220917833
Centisome position: 60.03
GC content: 83.86
Gene sequence:
>663_bases GTGACCGCGGCGCTCGCGGCGGCGATGCCGGTCGGCCCGCTGGGCGACGCGCTGACGGGGCTGGTGCGGGTCGCGCTGGC GACCCGTGCGTTCGGCTGGCCGCTGGGCCTCGCGCTGGTGGTGGTCGGGCTCGCGGCCCTGGTCGCCTCCGACCGGCTGC GGCGCCCGGCCGCGGCCGTGGGGGGCGCTGCGGTGGGGGTGCTGGCGGCGCTCGCGGCGCGGCGGCTCCTCGGCCCGCAG CTGGAGCTCTCCGCCGTCGCGTCGGCCGGGCTGGGCGCGGCGGTGCTGGGGGTGGCCTGCGCGGCGATGCCGCCGCTCTT CCCCGCCGCGGCCGGCGCGCTCGCCGGCGCCCTGGCCGGAGTCCACCTGCCCATCGGCGGGCGGGCGGCGGTCGGGGCGG GGCTCGGGGCGCTCGCGGCGGCGCTGCTCGCGCTGGCGGCGTCCCGCGCCGTCGCGGTGGTGCTGTGCGCGCTCTCCGGC GGCCTCGCGCTCGGCGTCGGGCTCCTGGCGGCGGCCGGGCCCCGGCCGCTCGCCTCCGAGCTGGCGATCCGGCCGTTCGC GCTGCTCGGGTTCGCGGTGGTGGCGGGCGTGGCGGGCGCGGCGTTCCAGCTCGCGCGCGGCGCGGCCGCGGCGCGTCCGG GGCCGGGCGCGCTGCGCGACTAG
Upstream 100 bases:
>100_bases CGCTGGCCTCCTTCAGGCCGGACCCGGCGGCGCTGGCGGTCGGAGCCGCCGGGGTGCTCGTCGCCGTCGCGCTGACGCTC TGGACCGTGCTGGGGGCGGG
Downstream 100 bases:
>100_bases CGCGACTCGCGCGCCGCCCGGCGGCGCGCAGGGGCGCGGTCCGGGCGGTGCACGTGCCTCAGGTCTCGGGCGGCCCGAGC AGCTCGAAGTCCGGGATCTC
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTAALAAAMPVGPLGDALTGLVRVALATRAFGWPLGLALVVVGLAALVASDRLRRPAAAVGGAAVGVLAALAARRLLGPQ LELSAVASAGLGAAVLGVACAAMPPLFPAAAGALAGALAGVHLPIGGRAAVGAGLGALAAALLALAASRAVAVVLCALSG GLALGVGLLAAAGPRPLASELAIRPFALLGFAVVAGVAGAAFQLARGAAAARPGPGALRD
Sequences:
>Translated_220_residues MTAALAAAMPVGPLGDALTGLVRVALATRAFGWPLGLALVVVGLAALVASDRLRRPAAAVGGAAVGVLAALAARRLLGPQ LELSAVASAGLGAAVLGVACAAMPPLFPAAAGALAGALAGVHLPIGGRAAVGAGLGALAAALLALAASRAVAVVLCALSG GLALGVGLLAAAGPRPLASELAIRPFALLGFAVVAGVAGAAFQLARGAAAARPGPGALRD >Mature_219_residues TAALAAAMPVGPLGDALTGLVRVALATRAFGWPLGLALVVVGLAALVASDRLRRPAAAVGGAAVGVLAALAARRLLGPQL ELSAVASAGLGAAVLGVACAAMPPLFPAAAGALAGALAGVHLPIGGRAAVGAGLGALAAALLALAASRAVAVVLCALSGG LALGVGLLAAAGPRPLASELAIRPFALLGFAVVAGVAGAAFQLARGAAAARPGPGALRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20502; Mature: 20371
Theoretical pI: Translated: 12.38; Mature: 12.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAALAAAMPVGPLGDALTGLVRVALATRAFGWPLGLALVVVGLAALVASDRLRRPAAAV CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHH GGAAVGVLAALAARRLLGPQLELSAVASAGLGAAVLGVACAAMPPLFPAAAGALAGALAG HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VHLPIGGRAAVGAGLGALAAALLALAASRAVAVVLCALSGGLALGVGLLAAAGPRPLASE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHH LAIRPFALLGFAVVAGVAGAAFQLARGAAAARPGPGALRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TAALAAAMPVGPLGDALTGLVRVALATRAFGWPLGLALVVVGLAALVASDRLRRPAAAV CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHH GGAAVGVLAALAARRLLGPQLELSAVASAGLGAAVLGVACAAMPPLFPAAAGALAGALAG HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VHLPIGGRAAVGAGLGALAAALLALAASRAVAVVLCALSGGLALGVGLLAAAGPRPLASE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHH LAIRPFALLGFAVVAGVAGAAFQLARGAAAARPGPGALRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA