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The map label for this gene is yebA [C]

Identifier: 220917831

GI number: 220917831

Start: 3012423

End: 3013745

Strand: Direct

Name: yebA [C]

Synonym: A2cp1_2732

Alternate gene names: 220917831

Gene position: 3012423-3013745 (Clockwise)

Preceding gene: 220917830

Following gene: 220917834

Centisome position: 59.9

GC content: 74.15

Gene sequence:

>1323_bases
ATGCAAGTACCTCGCTTCGACGACGCCCCCCGCCGCCGCCGCCTCCCCGTGCTGCTCGCCGGCGCCGGCTTCCTCGCCCT
CCTGATCCTCGCGCTCGCCGGAGCCGCCGGCGGCCTCCGCACGGTGCCCGGCGCGCCGGCCGCCCCGGTCGCTGCTGCGC
CCGAGGCCGCGGCCATGCTGCCCGCGCCCACCACCGCCACGCTCGCCCCGCACAAGCCCACGCCGGCGGAGCGGTTCCGC
GCGGTGACGGTGCGGCTCGCCCGCAACCAGACCCTCGCGCAGGCGCTGGTGAAGCTCGACGTGCCGATGGCGCAGGTGAA
CGCGGTGGTGGCCTCGCTGAAGGGGCTGTTCCCGTTCCACCGCGCCCGCCCTGGCGACCAGCTCCGGGTGGAGCGCCGCG
ACGAGGACGGCGAGCTGCACCGGTTCAGCTACCGGCAGGGGCCGGCGGACGAGTGGACCGTGGAGCGCAAGGAGGACGGG
TCCTTCGAGGCTCGCAAGCGCCCGGTCGAGCTGACCACCGAGGTGGCGCGCGTGGCGGTGAAGGTGGAGGGCTCGCTATG
GGCGTCGCTGGAGCGCGCCGGCGAGGATCCCGAGCTGGCCGTGCTCGCCTCCGACGTGCTGGCCTGGGACGTCGACTTCT
ACCAGGACGTCCGCGCCGGCGACGCCATGACCATGGTGGTCGAGAAGGTGCTCGCCGACGGCAAGCTGCTCCGCTACGGC
GAGGTGCTGGCCGCCGAGTACAAGGGCGAGGCGGCCGGCCGTAAGCGGCTGTTCCGCTACACCGATCCGGACGGCCACAC
CAGCTACTACGACGAGAACGGCAACAGCGCGCGGCGCGGCTTCCTGAAGTCGCCGCTCAAGCTCGCGCGCGTCACCTCCG
GCTTCGGGATGCGCAACCACCCGCTGCTCGGCTACGTCCGCGCCCACCAGGGCGTGGACTACGGCGCGCCCACCGGCACG
CCGGTCTGGGCCGTCGGGGACGGGCAGGTCCGCGAGGCCGGCTGGAAGGGCGGCTGCGGCAAGGCGGTGGTGCTGAAGCA
CCGCAACGGCCTGGAGTCGGTCTACTGCCACCTGTCGGCGGTGGCGGTCTCCGCGGGCAAGGCGGTGTCGCAGAAGCAGG
TCATCGGCTACGTCGGCTCGACCGGCCTCTCGACCGGCCCGCACCTGCACTTCGCGGTGAAGCGCGGCGGGTCCTTCGTG
AACCCGCTCCGGCTGCAGATCCCGCGCGACGCGCCCATCCCCGCGAAGTGGGCCGCCGACTTCGCCGAGAAGATCGCGCC
GGTGCGGGCCAGCCTGGCCGGCGAGCCGGTCGCGCTCAACTAG

Upstream 100 bases:

>100_bases
CGACGGCAAGGAGCACTCGGACCGGCGGGCCGACCTGTAGGCCGAGGTGGTCGACTCGGAGCTTCCTGTTCCCTTTCTCG
CCTGCTAGATTCCCGCGCCG

Downstream 100 bases:

>100_bases
CCCGCAGCACCGCCAGCGAGAGCCCGGGGAGGATCCCGGGCACGAGCGCCCACTCCAGCGCGCGCGCGCCGCTGGGCGTC
GCCACCGTCGCGGCGCCCTG

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MQVPRFDDAPRRRRLPVLLAGAGFLALLILALAGAAGGLRTVPGAPAAPVAAAPEAAAMLPAPTTATLAPHKPTPAERFR
AVTVRLARNQTLAQALVKLDVPMAQVNAVVASLKGLFPFHRARPGDQLRVERRDEDGELHRFSYRQGPADEWTVERKEDG
SFEARKRPVELTTEVARVAVKVEGSLWASLERAGEDPELAVLASDVLAWDVDFYQDVRAGDAMTMVVEKVLADGKLLRYG
EVLAAEYKGEAAGRKRLFRYTDPDGHTSYYDENGNSARRGFLKSPLKLARVTSGFGMRNHPLLGYVRAHQGVDYGAPTGT
PVWAVGDGQVREAGWKGGCGKAVVLKHRNGLESVYCHLSAVAVSAGKAVSQKQVIGYVGSTGLSTGPHLHFAVKRGGSFV
NPLRLQIPRDAPIPAKWAADFAEKIAPVRASLAGEPVALN

Sequences:

>Translated_440_residues
MQVPRFDDAPRRRRLPVLLAGAGFLALLILALAGAAGGLRTVPGAPAAPVAAAPEAAAMLPAPTTATLAPHKPTPAERFR
AVTVRLARNQTLAQALVKLDVPMAQVNAVVASLKGLFPFHRARPGDQLRVERRDEDGELHRFSYRQGPADEWTVERKEDG
SFEARKRPVELTTEVARVAVKVEGSLWASLERAGEDPELAVLASDVLAWDVDFYQDVRAGDAMTMVVEKVLADGKLLRYG
EVLAAEYKGEAAGRKRLFRYTDPDGHTSYYDENGNSARRGFLKSPLKLARVTSGFGMRNHPLLGYVRAHQGVDYGAPTGT
PVWAVGDGQVREAGWKGGCGKAVVLKHRNGLESVYCHLSAVAVSAGKAVSQKQVIGYVGSTGLSTGPHLHFAVKRGGSFV
NPLRLQIPRDAPIPAKWAADFAEKIAPVRASLAGEPVALN
>Mature_440_residues
MQVPRFDDAPRRRRLPVLLAGAGFLALLILALAGAAGGLRTVPGAPAAPVAAAPEAAAMLPAPTTATLAPHKPTPAERFR
AVTVRLARNQTLAQALVKLDVPMAQVNAVVASLKGLFPFHRARPGDQLRVERRDEDGELHRFSYRQGPADEWTVERKEDG
SFEARKRPVELTTEVARVAVKVEGSLWASLERAGEDPELAVLASDVLAWDVDFYQDVRAGDAMTMVVEKVLADGKLLRYG
EVLAAEYKGEAAGRKRLFRYTDPDGHTSYYDENGNSARRGFLKSPLKLARVTSGFGMRNHPLLGYVRAHQGVDYGAPTGT
PVWAVGDGQVREAGWKGGCGKAVVLKHRNGLESVYCHLSAVAVSAGKAVSQKQVIGYVGSTGLSTGPHLHFAVKRGGSFV
NPLRLQIPRDAPIPAKWAADFAEKIAPVRASLAGEPVALN

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=350, Percent_Identity=29.7142857142857, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI87082297, Length=93, Percent_Identity=40.8602150537634, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 47231; Mature: 47231

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVPRFDDAPRRRRLPVLLAGAGFLALLILALAGAAGGLRTVPGAPAAPVAAAPEAAAML
CCCCCCCCCHHHCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEC
PAPTTATLAPHKPTPAERFRAVTVRLARNQTLAQALVKLDVPMAQVNAVVASLKGLFPFH
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
RARPGDQLRVERRDEDGELHRFSYRQGPADEWTVERKEDGSFEARKRPVELTTEVARVAV
HCCCCCCEEEECCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHCCCHHHHHHHHHEEE
KVEGSLWASLERAGEDPELAVLASDVLAWDVDFYQDVRAGDAMTMVVEKVLADGKLLRYG
EECCHHHHHHHHCCCCCCEEEEEHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEHH
EVLAAEYKGEAAGRKRLFRYTDPDGHTSYYDENGNSARRGFLKSPLKLARVTSGFGMRNH
HHHHHHHCCCHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCC
PLLGYVRAHQGVDYGAPTGTPVWAVGDGQVREAGWKGGCGKAVVLKHRNGLESVYCHLSA
CEEEEEEHHCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHHH
VAVSAGKAVSQKQVIGYVGSTGLSTGPHLHFAVKRGGSFVNPLRLQIPRDAPIPAKWAAD
HHHHCCCHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHH
FAEKIAPVRASLAGEPVALN
HHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MQVPRFDDAPRRRRLPVLLAGAGFLALLILALAGAAGGLRTVPGAPAAPVAAAPEAAAML
CCCCCCCCCHHHCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEC
PAPTTATLAPHKPTPAERFRAVTVRLARNQTLAQALVKLDVPMAQVNAVVASLKGLFPFH
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
RARPGDQLRVERRDEDGELHRFSYRQGPADEWTVERKEDGSFEARKRPVELTTEVARVAV
HCCCCCCEEEECCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHCCCHHHHHHHHHEEE
KVEGSLWASLERAGEDPELAVLASDVLAWDVDFYQDVRAGDAMTMVVEKVLADGKLLRYG
EECCHHHHHHHHCCCCCCEEEEEHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEHH
EVLAAEYKGEAAGRKRLFRYTDPDGHTSYYDENGNSARRGFLKSPLKLARVTSGFGMRNH
HHHHHHHCCCHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCC
PLLGYVRAHQGVDYGAPTGTPVWAVGDGQVREAGWKGGCGKAVVLKHRNGLESVYCHLSA
CEEEEEEHHCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHHH
VAVSAGKAVSQKQVIGYVGSTGLSTGPHLHFAVKRGGSFVNPLRLQIPRDAPIPAKWAAD
HHHHCCCHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHH
FAEKIAPVRASLAGEPVALN
HHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]