Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220917796
Identifier: 220917796
GI number: 220917796
Start: 2977755
End: 2979125
Strand: Reverse
Name: 220917796
Synonym: A2cp1_2697
Alternate gene names: NA
Gene position: 2979125-2977755 (Counterclockwise)
Preceding gene: 220917797
Following gene: 220917795
Centisome position: 59.24
GC content: 79.21
Gene sequence:
>1371_bases ATGCGTCTTCGCCTCCTCCTCGCGATCGCCCTCGCCGCCGCGTCCGCCCCCCGCGCGCGGGCGGTCGACCTGAACGTCAT CACCGCGGTGGAGGTGCGCGACGCGGGGTCCTCGGTCGTGCTCTCGGTGAAGGGCTCGCGCAAGCCGAGCTTCACCACCT TCTCCATGGCCGATCCGCCGCGCTTCGTGATCGACTTCTCCGAGTCGCGCTTCGAGGGCGTGCCGGAGGACGTCCGCGTC GGCGACGGCACCGTCAAGGTGGTGAAGAACCTCTCCTACGGCTCCGACGCGACCTCGATCGCCCGCGTCATGGTCGCGTT CGAGGTGGAGGTGGCGCCGCCGGTGCTGGAGGAGTCGGGCGGCACGCTGCTGGTGAAGGTGGAGAAGCCCTCGGTGCCGG GCGCGGCCGTCGCGAAGGCCCCGGCGGCCGAGGCCGCGCCGGCCGCGTCGGCGGCGGCGCCGACCGTGGCGGAGGCGGTC GCCGCGGCGGTGGGCGGCGCCCCGGACGCCGGCGCGAAGGCGCAGGCCGAGGCGGACGCGAAGGCGCGCGCCGAGGCCGA GGCGCGGGCCGCGGAGCAGGCCGCCGCGGATGCGCGCGCCGCGCAGGAGGCGAGCGCCCGCGCCGAGGCCGCGGCCAGGG CCCAGGCGGAGGCGGACGCGAGCGCACGGGCCGAGGCGGAGGCGCGGGCGGCCGCGCAGGCCCAGGCGGACGCGCGCGCG GCGGCCGAGGCGGCAGCGCCCACCGAGCCGACGAAGGCGCAGGCTGCGGCCGCGGCGGCCCCGGCCCCGGCGGAGCCCGT CTCCCCCGCGGCCGAGCCGGTCGCCGACGCGACCGCGCCGGTCGCGGCTGCCGCCGGGCCGGCGCCCGAGCCGGTCGGCG CGGCCCCGGTGGCGGCGGCGCCCGCGGCCCGGCCCGACGCCGCGCGGGTGGACGGCGTCGCGCCGGTGGCGCACGTCCGC GAGGTCGGGTTCAAGCAGCTCCCCGGCGCGTCGCGCGTGTACGTTCGCACCACGGTCCCGCCGCGCTTCACCATCCAGGA CGTGGGGCCGGACGTCATCCGCGTCGAGCTGGAGAACACGCGGGCGGACCGGCGCAACGACCTGCGCTTCCTCGACACGA CCTTCTTCAAGTCGGCGGTCGCCCTGGTGACCCCCTCGCGCCACGGCACGAGCTACGTCCTCGACATCAAGCTGCGCGAG CGGGTGCCCTACCAGCAGCGCATCGAGGGCGACGCGCTGGCCATCGACTTCGAGCGCCCGGGCACCGCCGCGGCCCCGTC CGCGCCGGCCGCGGATGCGGACGCGCCGTCCGAGGCCGCGCCGGCAGCGGACGCCGCCCCGGCCGAGACCGCCGCGGCGC CGGCGCGGTAG
Upstream 100 bases:
>100_bases CGCCGGGGTAGGTGGATATCGGACTGCAAATCCTGGGGAATTCTTCGGAGCCCTGGGACCGCGTGCTATCCTCGCGCCGA CCTTTCCGCGGAGCCCCCTC
Downstream 100 bases:
>100_bases GCGCCAGGCCCCGCGCCCGTGATCGCGCTCGCTGCAGTCGCCGCGGCAGGGCTGCTCGCCCTGTCCGCCCCGCCGTCCAT CCCCGCCACCGCCGAGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MRLRLLLAIALAAASAPRARAVDLNVITAVEVRDAGSSVVLSVKGSRKPSFTTFSMADPPRFVIDFSESRFEGVPEDVRV GDGTVKVVKNLSYGSDATSIARVMVAFEVEVAPPVLEESGGTLLVKVEKPSVPGAAVAKAPAAEAAPAASAAAPTVAEAV AAAVGGAPDAGAKAQAEADAKARAEAEARAAEQAAADARAAQEASARAEAAARAQAEADASARAEAEARAAAQAQADARA AAEAAAPTEPTKAQAAAAAAPAPAEPVSPAAEPVADATAPVAAAAGPAPEPVGAAPVAAAPAARPDAARVDGVAPVAHVR EVGFKQLPGASRVYVRTTVPPRFTIQDVGPDVIRVELENTRADRRNDLRFLDTTFFKSAVALVTPSRHGTSYVLDIKLRE RVPYQQRIEGDALAIDFERPGTAAAPSAPAADADAPSEAAPAADAAPAETAAAPAR
Sequences:
>Translated_456_residues MRLRLLLAIALAAASAPRARAVDLNVITAVEVRDAGSSVVLSVKGSRKPSFTTFSMADPPRFVIDFSESRFEGVPEDVRV GDGTVKVVKNLSYGSDATSIARVMVAFEVEVAPPVLEESGGTLLVKVEKPSVPGAAVAKAPAAEAAPAASAAAPTVAEAV AAAVGGAPDAGAKAQAEADAKARAEAEARAAEQAAADARAAQEASARAEAAARAQAEADASARAEAEARAAAQAQADARA AAEAAAPTEPTKAQAAAAAAPAPAEPVSPAAEPVADATAPVAAAAGPAPEPVGAAPVAAAPAARPDAARVDGVAPVAHVR EVGFKQLPGASRVYVRTTVPPRFTIQDVGPDVIRVELENTRADRRNDLRFLDTTFFKSAVALVTPSRHGTSYVLDIKLRE RVPYQQRIEGDALAIDFERPGTAAAPSAPAADADAPSEAAPAADAAPAETAAAPAR >Mature_456_residues MRLRLLLAIALAAASAPRARAVDLNVITAVEVRDAGSSVVLSVKGSRKPSFTTFSMADPPRFVIDFSESRFEGVPEDVRV GDGTVKVVKNLSYGSDATSIARVMVAFEVEVAPPVLEESGGTLLVKVEKPSVPGAAVAKAPAAEAAPAASAAAPTVAEAV AAAVGGAPDAGAKAQAEADAKARAEAEARAAEQAAADARAAQEASARAEAAARAQAEADASARAEAEARAAAQAQADARA AAEAAAPTEPTKAQAAAAAAPAPAEPVSPAAEPVADATAPVAAAAGPAPEPVGAAPVAAAPAARPDAARVDGVAPVAHVR EVGFKQLPGASRVYVRTTVPPRFTIQDVGPDVIRVELENTRADRRNDLRFLDTTFFKSAVALVTPSRHGTSYVLDIKLRE RVPYQQRIEGDALAIDFERPGTAAAPSAPAADADAPSEAAPAADAAPAETAAAPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45830; Mature: 45830
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRLLLAIALAAASAPRARAVDLNVITAVEVRDAGSSVVLSVKGSRKPSFTTFSMADPP CCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCC RFVIDFSESRFEGVPEDVRVGDGTVKVVKNLSYGSDATSIARVMVAFEVEVAPPVLEESG EEEEECCHHHCCCCCCCCEECCCCEEHHHHCCCCCCHHHHHHEEEEEEEECCCCHHHCCC GTLLVKVEKPSVPGAAVAKAPAAEAAPAASAAAPTVAEAVAAAVGGAPDAGAKAQAEADA CEEEEEEECCCCCCHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHH KARAEAEARAAEQAAADARAAQEASARAEAAARAQAEADASARAEAEARAAAQAQADARA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AAEAAAPTEPTKAQAAAAAAPAPAEPVSPAAEPVADATAPVAAAAGPAPEPVGAAPVAAA HHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC PAARPDAARVDGVAPVAHVREVGFKQLPGASRVYVRTTVPPRFTIQDVGPDVIRVELENT CCCCCCCHHCCCCCHHHHHHHCCHHHCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCC RADRRNDLRFLDTTFFKSAVALVTPSRHGTSYVLDIKLRERVPYQQRIEGDALAIDFERP CCCCCCCCHHHHHHHHHHEEEEECCCCCCCEEEEEEEEHHCCCHHHHCCCCEEEEEECCC GTAAAPSAPAADADAPSEAAPAADAAPAETAAAPAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLRLLLAIALAAASAPRARAVDLNVITAVEVRDAGSSVVLSVKGSRKPSFTTFSMADPP CCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCC RFVIDFSESRFEGVPEDVRVGDGTVKVVKNLSYGSDATSIARVMVAFEVEVAPPVLEESG EEEEECCHHHCCCCCCCCEECCCCEEHHHHCCCCCCHHHHHHEEEEEEEECCCCHHHCCC GTLLVKVEKPSVPGAAVAKAPAAEAAPAASAAAPTVAEAVAAAVGGAPDAGAKAQAEADA CEEEEEEECCCCCCHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHH KARAEAEARAAEQAAADARAAQEASARAEAAARAQAEADASARAEAEARAAAQAQADARA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AAEAAAPTEPTKAQAAAAAAPAPAEPVSPAAEPVADATAPVAAAAGPAPEPVGAAPVAAA HHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC PAARPDAARVDGVAPVAHVREVGFKQLPGASRVYVRTTVPPRFTIQDVGPDVIRVELENT CCCCCCCHHCCCCCHHHHHHHCCHHHCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCC RADRRNDLRFLDTTFFKSAVALVTPSRHGTSYVLDIKLRERVPYQQRIEGDALAIDFERP CCCCCCCCHHHHHHHHHHEEEEECCCCCCCEEEEEEEEHHCCCHHHHCCCCEEEEEECCC GTAAAPSAPAADADAPSEAAPAADAAPAETAAAPAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA