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The map label for this gene is tapB [H]

Identifier: 220917771

GI number: 220917771

Start: 2948997

End: 2950832

Strand: Reverse

Name: tapB [H]

Synonym: A2cp1_2672

Alternate gene names: 220917771

Gene position: 2950832-2948997 (Counterclockwise)

Preceding gene: 220917772

Following gene: 220917770

Centisome position: 58.67

GC content: 73.26

Gene sequence:

>1836_bases
GTGCCAAGGACCTACCGCGCTACCGACTACACCCTCGAGTTCGTGGCCGATCTCCTCGCCAGGGAGGGGATCCTCACCGA
CGACGCGCGCCGCACCGCCACCGCCCGGGAGGGCGTCCAGCGCGCGCGCCTGCTCCGCGACGGCGCCTCGCGCAGCGGCG
GCCGGGCGCTGCGGCGCGCCGAGCTCTCGCCGGTCGAGGTGCTCGCCTCCTTCGAGTTCCCCGACGCCCGGCGCGACGCC
GAGCTGGTGGACGAGGACAAGGCCACGCAGGCCGTCGCGAAGGCGGTGGGGATCCCGTACCGCAAGATCGACCCGCTGAA
GCTCGACGCCCAGCTCATCACCCGGACGCTGTCGCGCCCCTTCGCGCGCAAGCACGCGGTGCTCCCGCTGGAGCGCCGCA
ACGGCTCGCTGGTGGTGGCGGCCGCGAACCCGTTCGACCGCGAGCTGCTGGAGAACCTGCGCGGCCTGATCGGCGCCGAG
GTCGAGGCGGTCCTCTCGTCGCCCTCGGACATCCACCGCGCCATCGCCGAGGTGTACGGGTTCCGCCAGCAGATCTCGCA
GGCCCGCGTCGAGCTGGAGGGCGGCGGCGGCGCCCCGGACGTCACGAACCTCGAGCAGTTCGTCAACCTGTCCGGCATCG
ACGCGCTGGAGGCGTCGAGCGAGCCGGTGGTCGCGGCGGTCGAGTACCTGCTGCACTACGCGTTCGAGCAGCGGGCCAGC
GACATCCACCTCGAGCCGCGGCGGGAGGAGTCGATCATCCGCATGCGGATCGACGGCGTGCTCCACCCGGTCCACCGCAT
CCCGAAGGCGGTGCACGGCGCCATCGCCAATCGCTTCAAGATCATGAGCCGGCTCGACATCGCGCTGAAGCGCCCGCAGG
ACGGGCGCATCCGCACCGCCCGCGGCGACGCCGAGATGGAGCTGCGCGTCTCGACCGTCCCCACCACCTTCGGCGACAAG
GTGGTGATCCGCGTGCTCGACCCGACCGTGCTGGTGCGCGACCTCTCCGAGCTGGGGTTCCTCCCCGACGAGCGCGACCA
GTTCGAGCGCTGGCTGCTGCGGCCGCACGGCCTGGTGATCGTGACCGGGCCCACCGGCAGCGGGAAGACCACCACGCTCT
ACTCGGCGCTGCAGGCGCTCGCCTCGCCCGAGGTGAACGTCGTGACCATCGAGGATCCCATCGAGATGGTCCACGAGGAC
TTCAACCAGATCGCCGCCAACCAGAAGACCGGCACCGGCTTCGCCGAGGCGCTGCGCCACGTGCTGCGCCAGGATCCGGA
CGTGGTGATGGTGGGCGAGGTCCGCGACGCGGAGACCGCCGCCCAGGCGGTCCAGGCGGCGCTCACCGGGCACATGGTGC
TGACCACGCTGCACACGAACGACACGGTGAGCGCGGTGGCCCGCCTGCGCGACCTGGGCGTGCCGAGCTTCCTCATCGCC
GCCACGCTCACCGGCATCGCCGCGCAGCGGCTGGTCCGGCAGGTGTGCCCCTCCTGCGCCGAGGACGTGCCGCTCACGGC
GGACGAGGTGCAGGCGCTGGGCGTGCCGCACCCCGAGGACCACGCCGGCAAGCTGCTGGCCCGGCGCGGCCGCGGGTGTC
CCAAGTGCCGGTTCACCGGCTACTACGGGCGCAGCGGCATCTTCGAGGTCCTGCCGGTGAACGCGCGCCTGCGCCACCTG
GTGGCGGAGGGCGCCACGCCCGAGGTGCTGCTCCGCACCGCCCGCCAGGACGGGCTGCGCCCGCTGCGCGAGCACGCGGT
GCGCAAGGTGGCCGCGGGCGTCACCTCCTTCGAGGAGGCGATGCGCGCCACCGCCGACGCCGAGGCGGCGCCGTGA

Upstream 100 bases:

>100_bases
ACGCCGCGCCCCGGCGGGCGCACGCCGGCGTCGCCGCACCCACACGCCGGCCGGTGCGCGGGCTGGGTCGCGCGCCGGTG
CCGCGGTAGAATCCCGCGGC

Downstream 100 bases:

>100_bases
GCCGGGCGGCCCGGATCCCCGAACCCACGGTGAGCGAGCCATGAGCGTCTCCTCCGAGATCGCCGAGCTGTGGTCGGCGG
GCACCCCGGTCCTCTACCTG

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 610

Protein sequence:

>611_residues
MPRTYRATDYTLEFVADLLAREGILTDDARRTATAREGVQRARLLRDGASRSGGRALRRAELSPVEVLASFEFPDARRDA
ELVDEDKATQAVAKAVGIPYRKIDPLKLDAQLITRTLSRPFARKHAVLPLERRNGSLVVAAANPFDRELLENLRGLIGAE
VEAVLSSPSDIHRAIAEVYGFRQQISQARVELEGGGGAPDVTNLEQFVNLSGIDALEASSEPVVAAVEYLLHYAFEQRAS
DIHLEPRREESIIRMRIDGVLHPVHRIPKAVHGAIANRFKIMSRLDIALKRPQDGRIRTARGDAEMELRVSTVPTTFGDK
VVIRVLDPTVLVRDLSELGFLPDERDQFERWLLRPHGLVIVTGPTGSGKTTTLYSALQALASPEVNVVTIEDPIEMVHED
FNQIAANQKTGTGFAEALRHVLRQDPDVVMVGEVRDAETAAQAVQAALTGHMVLTTLHTNDTVSAVARLRDLGVPSFLIA
ATLTGIAAQRLVRQVCPSCAEDVPLTADEVQALGVPHPEDHAGKLLARRGRGCPKCRFTGYYGRSGIFEVLPVNARLRHL
VAEGATPEVLLRTARQDGLRPLREHAVRKVAAGVTSFEEAMRATADAEAAP

Sequences:

>Translated_611_residues
MPRTYRATDYTLEFVADLLAREGILTDDARRTATAREGVQRARLLRDGASRSGGRALRRAELSPVEVLASFEFPDARRDA
ELVDEDKATQAVAKAVGIPYRKIDPLKLDAQLITRTLSRPFARKHAVLPLERRNGSLVVAAANPFDRELLENLRGLIGAE
VEAVLSSPSDIHRAIAEVYGFRQQISQARVELEGGGGAPDVTNLEQFVNLSGIDALEASSEPVVAAVEYLLHYAFEQRAS
DIHLEPRREESIIRMRIDGVLHPVHRIPKAVHGAIANRFKIMSRLDIALKRPQDGRIRTARGDAEMELRVSTVPTTFGDK
VVIRVLDPTVLVRDLSELGFLPDERDQFERWLLRPHGLVIVTGPTGSGKTTTLYSALQALASPEVNVVTIEDPIEMVHED
FNQIAANQKTGTGFAEALRHVLRQDPDVVMVGEVRDAETAAQAVQAALTGHMVLTTLHTNDTVSAVARLRDLGVPSFLIA
ATLTGIAAQRLVRQVCPSCAEDVPLTADEVQALGVPHPEDHAGKLLARRGRGCPKCRFTGYYGRSGIFEVLPVNARLRHL
VAEGATPEVLLRTARQDGLRPLREHAVRKVAAGVTSFEEAMRATADAEAAP
>Mature_610_residues
PRTYRATDYTLEFVADLLAREGILTDDARRTATAREGVQRARLLRDGASRSGGRALRRAELSPVEVLASFEFPDARRDAE
LVDEDKATQAVAKAVGIPYRKIDPLKLDAQLITRTLSRPFARKHAVLPLERRNGSLVVAAANPFDRELLENLRGLIGAEV
EAVLSSPSDIHRAIAEVYGFRQQISQARVELEGGGGAPDVTNLEQFVNLSGIDALEASSEPVVAAVEYLLHYAFEQRASD
IHLEPRREESIIRMRIDGVLHPVHRIPKAVHGAIANRFKIMSRLDIALKRPQDGRIRTARGDAEMELRVSTVPTTFGDKV
VIRVLDPTVLVRDLSELGFLPDERDQFERWLLRPHGLVIVTGPTGSGKTTTLYSALQALASPEVNVVTIEDPIEMVHEDF
NQIAANQKTGTGFAEALRHVLRQDPDVVMVGEVRDAETAAQAVQAALTGHMVLTTLHTNDTVSAVARLRDLGVPSFLIAA
TLTGIAAQRLVRQVCPSCAEDVPLTADEVQALGVPHPEDHAGKLLARRGRGCPKCRFTGYYGRSGIFEVLPVNARLRHLV
AEGATPEVLLRTARQDGLRPLREHAVRKVAAGVTSFEEAMRATADAEAAP

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=497, Percent_Identity=39.6378269617706, Blast_Score=325, Evalue=4e-90,
Organism=Escherichia coli, GI1786296, Length=392, Percent_Identity=41.5816326530612, Blast_Score=299, Evalue=4e-82,
Organism=Escherichia coli, GI87082188, Length=120, Percent_Identity=44.1666666666667, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013374
- InterPro:   IPR007831
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 66826; Mature: 66695

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTYRATDYTLEFVADLLAREGILTDDARRTATAREGVQRARLLRDGASRSGGRALRRA
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC
ELSPVEVLASFEFPDARRDAELVDEDKATQAVAKAVGIPYRKIDPLKLDAQLITRTLSRP
CCCHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCH
FARKHAVLPLERRNGSLVVAAANPFDRELLENLRGLIGAEVEAVLSSPSDIHRAIAEVYG
HHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FRQQISQARVELEGGGGAPDVTNLEQFVNLSGIDALEASSEPVVAAVEYLLHYAFEQRAS
HHHHHHHHHEEECCCCCCCCHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCC
DIHLEPRREESIIRMRIDGVLHPVHRIPKAVHGAIANRFKIMSRLDIALKRPQDGRIRTA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
RGDAEMELRVSTVPTTFGDKVVIRVLDPTVLVRDLSELGFLPDERDQFERWLLRPHGLVI
CCCCEEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEE
VTGPTGSGKTTTLYSALQALASPEVNVVTIEDPIEMVHEDFNQIAANQKTGTGFAEALRH
EECCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VLRQDPDVVMVGEVRDAETAAQAVQAALTGHMVLTTLHTNDTVSAVARLRDLGVPSFLIA
HHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCHHHHH
ATLTGIAAQRLVRQVCPSCAEDVPLTADEVQALGVPHPEDHAGKLLARRGRGCPKCRFTG
HHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEC
YYGRSGIFEVLPVNARLRHLVAEGATPEVLLRTARQDGLRPLREHAVRKVAAGVTSFEEA
CCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
MRATADAEAAP
HHHHCCCCCCC
>Mature Secondary Structure 
PRTYRATDYTLEFVADLLAREGILTDDARRTATAREGVQRARLLRDGASRSGGRALRRA
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC
ELSPVEVLASFEFPDARRDAELVDEDKATQAVAKAVGIPYRKIDPLKLDAQLITRTLSRP
CCCHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCH
FARKHAVLPLERRNGSLVVAAANPFDRELLENLRGLIGAEVEAVLSSPSDIHRAIAEVYG
HHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FRQQISQARVELEGGGGAPDVTNLEQFVNLSGIDALEASSEPVVAAVEYLLHYAFEQRAS
HHHHHHHHHEEECCCCCCCCHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCC
DIHLEPRREESIIRMRIDGVLHPVHRIPKAVHGAIANRFKIMSRLDIALKRPQDGRIRTA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
RGDAEMELRVSTVPTTFGDKVVIRVLDPTVLVRDLSELGFLPDERDQFERWLLRPHGLVI
CCCCEEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEE
VTGPTGSGKTTTLYSALQALASPEVNVVTIEDPIEMVHEDFNQIAANQKTGTGFAEALRH
EECCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VLRQDPDVVMVGEVRDAETAAQAVQAALTGHMVLTTLHTNDTVSAVARLRDLGVPSFLIA
HHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCHHHHH
ATLTGIAAQRLVRQVCPSCAEDVPLTADEVQALGVPHPEDHAGKLLARRGRGCPKCRFTG
HHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEC
YYGRSGIFEVLPVNARLRHLVAEGATPEVLLRTARQDGLRPLREHAVRKVAAGVTSFEEA
CCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
MRATADAEAAP
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]