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The map label for this gene is recO

Identifier: 220917752

GI number: 220917752

Start: 2931823

End: 2932587

Strand: Reverse

Name: recO

Synonym: A2cp1_2653

Alternate gene names: 220917752

Gene position: 2932587-2931823 (Counterclockwise)

Preceding gene: 220917753

Following gene: 220917751

Centisome position: 58.31

GC content: 80.0

Gene sequence:

>765_bases
ATGGACCGGGCGAAGCTCACCGGCGTGGTGCTCCGCGCCGTGGACTACGGCGAGTCGGATCGCGTGGTGACGCTGCTCAC
GGCGGAGCGGGGCAAGGTCTCCGCGTTCGCGCGCGGGGCGCGCGCCTCGCGGCGGCGCTTCGGCGGCGCGCTGGAGCCGT
TCACGCTGCTCTCGGCGGAGGTCCGCGAGCGCTCCGGCTCGGACCTCCTCGGCCTGGACTCGGTGTCGGTGGTGCGCGGC
TTCGGCGCGCTCCGCGGCGACCTCGGGCGGATCGCCTGCGCCGGCTATGCGGCCGAGCTGGCGCGCGAGCTGGTGCGCGA
CCACCAGCCCCACGACGAGCTGTTCGAGCTGCTGGTCGCCTACCTCGACGCGCTGGACGCCGGGCCGCCGCGCCCGGCGG
CGCTGCGCGCCTTCGAGCTGGGCGCGCTGCGCGCCGCCGGGCTCATGCCGCGCCTCGACGCCTGCGCGCGCTGCGGGGCG
CCGGTCGGCGAGGGCCCGGTGCGCTTCGACGCGGGGGAGGGGGGCGCGCTCTGCGCGGGCTGCGCGCCGGGCGTCCCGCG
CACGCTCCCGCTCGCCGCCGGCACCCTCGCCGCGCTCCTGCGGCTCCAGGACGGCGGCCTCGCCGCCGCCGCGTCCGAGC
CGCTCGCCCCGCCCGCCGGGCGCGAGGCGCGCGAGGCGCTCACCGCGTTCCTGGAGCACCACCTCGGCCGGCGGCTCGCG
GCCCGCCGCTTCCTCGACGAGATCGGGCCGCTGCTGGGCGCCTGA

Upstream 100 bases:

>100_bases
GCCGCCCTGGCGCTCGCGGTCGCCGCGGCCGCCGCCTGGGCCATGCTCGGCCGCTGAGGTCCCGAGCGCGCGCGCCGCCT
GGCCGGTAAGATGGCCGGGA

Downstream 100 bases:

>100_bases
CGTGACGTCGGCCCGCGCCGGCCCGCCATCGCATCCGCTCGACCGCGCCACGCCCGGAGGCAGGCCGCCATGAGGGATCT
CGACGTGCTGTGCCTGGGGG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MDRAKLTGVVLRAVDYGESDRVVTLLTAERGKVSAFARGARASRRRFGGALEPFTLLSAEVRERSGSDLLGLDSVSVVRG
FGALRGDLGRIACAGYAAELARELVRDHQPHDELFELLVAYLDALDAGPPRPAALRAFELGALRAAGLMPRLDACARCGA
PVGEGPVRFDAGEGGALCAGCAPGVPRTLPLAAGTLAALLRLQDGGLAAAASEPLAPPAGREAREALTAFLEHHLGRRLA
ARRFLDEIGPLLGA

Sequences:

>Translated_254_residues
MDRAKLTGVVLRAVDYGESDRVVTLLTAERGKVSAFARGARASRRRFGGALEPFTLLSAEVRERSGSDLLGLDSVSVVRG
FGALRGDLGRIACAGYAAELARELVRDHQPHDELFELLVAYLDALDAGPPRPAALRAFELGALRAAGLMPRLDACARCGA
PVGEGPVRFDAGEGGALCAGCAPGVPRTLPLAAGTLAALLRLQDGGLAAAASEPLAPPAGREAREALTAFLEHHLGRRLA
ARRFLDEIGPLLGA
>Mature_254_residues
MDRAKLTGVVLRAVDYGESDRVVTLLTAERGKVSAFARGARASRRRFGGALEPFTLLSAEVRERSGSDLLGLDSVSVVRG
FGALRGDLGRIACAGYAAELARELVRDHQPHDELFELLVAYLDALDAGPPRPAALRAFELGALRAAGLMPRLDACARCGA
PVGEGPVRFDAGEGGALCAGCAPGVPRTLPLAAGTLAALLRLQDGGLAAAASEPLAPPAGREAREALTAFLEHHLGRRLA
ARRFLDEIGPLLGA

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_ANAD2 (B8JDE1)

Other databases:

- EMBL:   CP001359
- RefSeq:   YP_002493056.1
- ProteinModelPortal:   B8JDE1
- SMR:   B8JDE1
- GeneID:   7299654
- GenomeReviews:   CP001359_GR
- KEGG:   acp:A2cp1_2653
- HOGENOM:   HBG634481
- ProtClustDB:   CLSK945592
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 26461; Mature: 26461

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRAKLTGVVLRAVDYGESDRVVTLLTAERGKVSAFARGARASRRRFGGALEPFTLLSAE
CCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VRERSGSDLLGLDSVSVVRGFGALRGDLGRIACAGYAAELARELVRDHQPHDELFELLVA
HHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YLDALDAGPPRPAALRAFELGALRAAGLMPRLDACARCGAPVGEGPVRFDAGEGGALCAG
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCCCEEEEC
CAPGVPRTLPLAAGTLAALLRLQDGGLAAAASEPLAPPAGREAREALTAFLEHHLGRRLA
CCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ARRFLDEIGPLLGA
HHHHHHHHHHHHCC
>Mature Secondary Structure
MDRAKLTGVVLRAVDYGESDRVVTLLTAERGKVSAFARGARASRRRFGGALEPFTLLSAE
CCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VRERSGSDLLGLDSVSVVRGFGALRGDLGRIACAGYAAELARELVRDHQPHDELFELLVA
HHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YLDALDAGPPRPAALRAFELGALRAAGLMPRLDACARCGAPVGEGPVRFDAGEGGALCAG
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCCCEEEEC
CAPGVPRTLPLAAGTLAALLRLQDGGLAAAASEPLAPPAGREAREALTAFLEHHLGRRLA
CCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ARRFLDEIGPLLGA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA