Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is scrK [H]
Identifier: 220917751
GI number: 220917751
Start: 2930803
End: 2931753
Strand: Reverse
Name: scrK [H]
Synonym: A2cp1_2652
Alternate gene names: 220917751
Gene position: 2931753-2930803 (Counterclockwise)
Preceding gene: 220917752
Following gene: 220917750
Centisome position: 58.29
GC content: 78.23
Gene sequence:
>951_bases ATGAGGGATCTCGACGTGCTGTGCCTGGGGGAGGCGCTGGTGGACCTGCTGCCGGATCGGCGTGGGGCCCTGGAGGACTG CGGCCGCTTCGAGGCGTGCCCCGGCGGCGCGCCGGCGAACGTCGCCACCGGGCTGGCGCGCCTCGGGGTCCGCACCGGCT TCCGCGGCGTGGTCGGCGACGATCCGTTCGGCCGGATGCTGGCGCGCCGGCTCGCCGCCGAGGGCATCGAGGTCTCGCTC CGGCTCGCGCGCGAGCGGCCCACCGGGATGTGGTTCGTGGCGCTCGACGCGGCGGGGGAGCGGACGTTCTTCTCGCCCAA CGCCCGCTTCTCCGCCGACAAGCTCGTCGCGCCCGCCGACGCCGACCCGGCCGCGATCGGCCGCGCCCGCGTGCTGCACA CCGGGACCTCGGCGCACGTGCTGCCGGAGGGCAGGGCGGCGCTGCGGGCCGCGGTGGAGGCGGCGCGGCGCCTCGGCGTG GAGGTGTCCTTCGACCCGAACGTCCGCGCGCACCTGTGGGACGACCTCGCGCCGCTGCGGGCGCTCTGCCAGGACGTGCT GCCGCGCTGCGCGGTGGCGAAGCTCTCCGAGGAGGAGATCGCGCTCTGCACCGGCGAGGCCGACCCCGCGCGCGCTGCGG CGCGGCTCGTCGCGATGGGCGTCGGCATCGCCTGCGTGACGCTGGGCCCGCGCGGCGCCCTGGTACGGCGCGGCGCCGAC GAGGCGCACGTGCCGGCCGAGCCGGTGGCGGTGGTGGACACCACCGGCGCCGGCGACGGGTTCGTGGCCGGGCTGCTCGC GGCGCTCTCGCGCGGCGCGGCCCCGCTCGCCGCCCGCTCGTTCGCCGAGGTGGTCGCGGCGGTGCGCTTCGCGAACCGGG TGGCGGGGCGCGTCTGCACGCGCGTCGGCGCGGTCGCCGGGCTGCCGCACACTGGCGAGATTTCCGTTTGA
Upstream 100 bases:
>100_bases CGACGAGATCGGGCCGCTGCTGGGCGCCTGACGTGACGTCGGCCCGCGCCGGCCCGCCATCGCATCCGCTCGACCGCGCC ACGCCCGGAGGCAGGCCGCC
Downstream 100 bases:
>100_bases CACCCGCACCTTACGGCCCTACGGTGCCCGTTCCCCGGCCCGTTCGCCGCGGCGCGGCCGCCCCGCCGGATGATCCGCGG GCGCGCGCCGGCTCGAACGC
Product: PfkB domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MRDLDVLCLGEALVDLLPDRRGALEDCGRFEACPGGAPANVATGLARLGVRTGFRGVVGDDPFGRMLARRLAAEGIEVSL RLARERPTGMWFVALDAAGERTFFSPNARFSADKLVAPADADPAAIGRARVLHTGTSAHVLPEGRAALRAAVEAARRLGV EVSFDPNVRAHLWDDLAPLRALCQDVLPRCAVAKLSEEEIALCTGEADPARAAARLVAMGVGIACVTLGPRGALVRRGAD EAHVPAEPVAVVDTTGAGDGFVAGLLAALSRGAAPLAARSFAEVVAAVRFANRVAGRVCTRVGAVAGLPHTGEISV
Sequences:
>Translated_316_residues MRDLDVLCLGEALVDLLPDRRGALEDCGRFEACPGGAPANVATGLARLGVRTGFRGVVGDDPFGRMLARRLAAEGIEVSL RLARERPTGMWFVALDAAGERTFFSPNARFSADKLVAPADADPAAIGRARVLHTGTSAHVLPEGRAALRAAVEAARRLGV EVSFDPNVRAHLWDDLAPLRALCQDVLPRCAVAKLSEEEIALCTGEADPARAAARLVAMGVGIACVTLGPRGALVRRGAD EAHVPAEPVAVVDTTGAGDGFVAGLLAALSRGAAPLAARSFAEVVAAVRFANRVAGRVCTRVGAVAGLPHTGEISV >Mature_316_residues MRDLDVLCLGEALVDLLPDRRGALEDCGRFEACPGGAPANVATGLARLGVRTGFRGVVGDDPFGRMLARRLAAEGIEVSL RLARERPTGMWFVALDAAGERTFFSPNARFSADKLVAPADADPAAIGRARVLHTGTSAHVLPEGRAALRAAVEAARRLGV EVSFDPNVRAHLWDDLAPLRALCQDVLPRCAVAKLSEEEIALCTGEADPARAAARLVAMGVGIACVTLGPRGALVRRGAD EAHVPAEPVAVVDTTGAGDGFVAGLLAALSRGAAPLAARSFAEVVAAVRFANRVAGRVCTRVGAVAGLPHTGEISV
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Homo sapiens, GI11545855, Length=238, Percent_Identity=30.672268907563, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI87081971, Length=321, Percent_Identity=28.9719626168224, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789775, Length=268, Percent_Identity=28.7313432835821, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI87082343, Length=314, Percent_Identity=28.9808917197452, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082281, Length=259, Percent_Identity=27.7992277992278, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1790193, Length=248, Percent_Identity=25.4032258064516, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 32682; Mature: 32682
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2 ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLDVLCLGEALVDLLPDRRGALEDCGRFEACPGGAPANVATGLARLGVRTGFRGVVGD CCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC DPFGRMLARRLAAEGIEVSLRLARERPTGMWFVALDAAGERTFFSPNARFSADKLVAPAD CHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCCEECCCC ADPAAIGRARVLHTGTSAHVLPEGRAALRAAVEAARRLGVEVSFDPNVRAHLWDDLAPLR CCHHHHCCEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHH ALCQDVLPRCAVAKLSEEEIALCTGEADPARAAARLVAMGVGIACVTLGPRGALVRRGAD HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCC EAHVPAEPVAVVDTTGAGDGFVAGLLAALSRGAAPLAARSFAEVVAAVRFANRVAGRVCT CCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RVGAVAGLPHTGEISV HHHHHHCCCCCCCCCC >Mature Secondary Structure MRDLDVLCLGEALVDLLPDRRGALEDCGRFEACPGGAPANVATGLARLGVRTGFRGVVGD CCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC DPFGRMLARRLAAEGIEVSLRLARERPTGMWFVALDAAGERTFFSPNARFSADKLVAPAD CHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCCEECCCC ADPAAIGRARVLHTGTSAHVLPEGRAALRAAVEAARRLGVEVSFDPNVRAHLWDDLAPLR CCHHHHCCEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHH ALCQDVLPRCAVAKLSEEEIALCTGEADPARAAARLVAMGVGIACVTLGPRGALVRRGAD HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCC EAHVPAEPVAVVDTTGAGDGFVAGLLAALSRGAAPLAARSFAEVVAAVRFANRVAGRVCT CCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RVGAVAGLPHTGEISV HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1809835 [H]