Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917732
Identifier: 220917732
GI number: 220917732
Start: 2907149
End: 2907580
Strand: Reverse
Name: 220917732
Synonym: A2cp1_2633
Alternate gene names: NA
Gene position: 2907580-2907149 (Counterclockwise)
Preceding gene: 220917733
Following gene: 220917731
Centisome position: 57.81
GC content: 74.31
Gene sequence:
>432_bases ATGACGCTCGTCTGCGAGGCGATGAACCGGGCACCGATGTCGGTGGAGGCGGACGTGACCGCGGCGCGGGCGCTCGCCGT GGTGGAGACCACCGGCGCCGCGCACCTGCTGGTGATGGATCACGACGACCTGATCGGCATCCTCTGCGCGTGCGACCTGC GCGCGGCCGGACCGGACGAGCAGGTCTCGGAGCGCATGAGCGTGCCGGTGATCACCATCCGCCCGGACGCGACGCTGGAG GACGCGGCCGTCACGCTGGGTGACTGCGGGGTGGGGTGCCTGCCCGTCGCCGTGGGCGGCCTGGTGCTCGGCACCATCGG CGAGGAGGAGCTCGCCGCCGCCGGGATCCAGGGCCGGCTGCCGCACCGGCGCTGCCACCCGCGCGCGCACGGGCTGGAGC CGCCAGGCCCACACCTGGCACACCATCACTGA
Upstream 100 bases:
>100_bases GCGGACGCGTCCGCCCGTGAGCGGGGGGGACCAGGGACGGGCGCCGGCGGCGGCTCCGCGGGGCCGCGGCAGGGGCCGGC CCCGAGGAGGAGGTCGTCCC
Downstream 100 bases:
>100_bases TGGTCACGCGCGCGCGCCGGCGCGCACGCCCGCGTGGCCTCCCCCTTGCTACCGGAGCGGGCGGGGGAGGCGCATGCGCA AGCAGACCGTCCAGGCGTTC
Product: CBS domain containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTLVCEAMNRAPMSVEADVTAARALAVVETTGAAHLLVMDHDDLIGILCACDLRAAGPDEQVSERMSVPVITIRPDATLE DAAVTLGDCGVGCLPVAVGGLVLGTIGEEELAAAGIQGRLPHRRCHPRAHGLEPPGPHLAHHH
Sequences:
>Translated_143_residues MTLVCEAMNRAPMSVEADVTAARALAVVETTGAAHLLVMDHDDLIGILCACDLRAAGPDEQVSERMSVPVITIRPDATLE DAAVTLGDCGVGCLPVAVGGLVLGTIGEEELAAAGIQGRLPHRRCHPRAHGLEPPGPHLAHHH >Mature_142_residues TLVCEAMNRAPMSVEADVTAARALAVVETTGAAHLLVMDHDDLIGILCACDLRAAGPDEQVSERMSVPVITIRPDATLED AAVTLGDCGVGCLPVAVGGLVLGTIGEEELAAAGIQGRLPHRRCHPRAHGLEPPGPHLAHHH
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14840; Mature: 14709
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVCEAMNRAPMSVEADVTAARALAVVETTGAAHLLVMDHDDLIGILCACDLRAAGPDE CEEEECCCCCCCCEEECCHHHHHEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCH QVSERMSVPVITIRPDATLEDAAVTLGDCGVGCLPVAVGGLVLGTIGEEELAAAGIQGRL HHHHHCCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHHEEEECCCCHHHHHCCCCCCC PHRRCHPRAHGLEPPGPHLAHHH CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLVCEAMNRAPMSVEADVTAARALAVVETTGAAHLLVMDHDDLIGILCACDLRAAGPDE EEEECCCCCCCCEEECCHHHHHEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCH QVSERMSVPVITIRPDATLEDAAVTLGDCGVGCLPVAVGGLVLGTIGEEELAAAGIQGRL HHHHHCCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHHEEEECCCCHHHHHCCCCCCC PHRRCHPRAHGLEPPGPHLAHHH CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA