Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917643
Identifier: 220917643
GI number: 220917643
Start: 2818244
End: 2819461
Strand: Reverse
Name: 220917643
Synonym: A2cp1_2544
Alternate gene names: NA
Gene position: 2819461-2818244 (Counterclockwise)
Preceding gene: 220917644
Following gene: 220917640
Centisome position: 56.06
GC content: 64.7
Gene sequence:
>1218_bases ATGGATCGACTTCGAAACGTGATCTTGGCGCTGACGCTCGCGTCGGCGTATCCGGCCGCTGCGGTCGACCTCACGGTGGC GGCAATCTCGGCGTCGCCGCCCACGGTGCCGCTCGGTTCCACGGTGACGGTCGAGTCAACGGTCGCGGCCTCGGGGGGCG GCGCGGTCAATGGGTTCTACGTGCATTACTACCTATCGACGGATCCGACGATCACCACCTCGGATGTAGTGCTCGGTAAC CGCCACCTGTCGGCTGGTCTGAAGGACGGCGAATCGAGTACAGCGACGCTGACGTTCTCGCCGCCGACGAGCATCAGCGG GACGTACTACGTCGGCGCGATCGTCGACACGACGTCGCAGGTGAGCGAGTCGGACGAGACGAACAACGCGCTCGCGGGGC CGGTCATCACCATCACGAAGCCGGATCTCGTCGTCACGGCGGTGAGCGCAACCCCGGCCACGGTGCCGCTGGGCTCGCCG CTCACCGTTACTGACACGGTGACCTGTGCCGGAGGCAAGGCGAGCAACACGATATACGTCAAGTACTACCTGTCGTCCGA CCCGACGATCACGACGTCGGACGTGCCGCTCGGAAACCGCTACCTGTCGGCAGGTCTGAAGGATGGTGAATCGAGCACGG CGACGCTGGCGTTCTCTCCGCCCACGAGCATCAGCGGGACGTACTACGTCGGCGCGATCGTGGATGCGACGTCGCAGGTG AGCGAGTCGGACGAGACGAACAACGCGCTCGCGGGGCCGGTCATCACCATCACGAAGCCGGACCTCGTCGTCACCGCGCT CACGGCGACGCCGACGACCGTTCCATTGGGATCGTCGTTGACGGTGACGGACTCCGTGACCGTGACGGGCGGCAAGACAC TCTCGAGCTTCTACGTCAGGTACTACCTGTCGACGGATCCTGTCATCACGGCCTCCGACATCTCGATTGGCAGCCGCAGC ATTGGGGCCGCGATGACACCGGGGCAGTCGAACTCGGCGACGACGACGCTCTCCCCGTCCACCAGCATCACCGGAACCTA TTACGTGGGGGCGATCGTCGACAGTACCTACATCGACGAGTCGGACGAGACGAACAATGCGATCACTGGCCCGGTCATCA CCATCACGAAGCCGGACCTCGTCGTCACCGCGCTCACGGCGACGCCGACGACCGTTCCGTTGGGATCGTTGACCTGCCCC CCGACTTTAGACGGCTAG
Upstream 100 bases:
>100_bases ATGCCGCTTGGCGTTGAACGATCAGTCAAGTAGCGTGTCCTCACGTAGAGTGCGAGGCCGGCCGCGTGTCGCGCGGGCGG CCCGGGCGCCGGGTGAGGGC
Downstream 100 bases:
>100_bases CTTCGTGAGCCCGGCGAGACTGCGAGCAAACTCGTTTGGCGTCTGATTGTCCAGCGAGCTGTGCGGCCGGACCTGGTTGT AGTCGACTCGGTACGCCTCG
Product: APHP domain-containing protein
Products: NA
Alternate protein names: APHP Domain-Containing Protein; Peptidase S8 And; Fibronectin Type III Domain-Containing Protein; YD Repeat-Containing Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Peptidase S8 And S; CARDB Domain Protein; YVTN Beta-Propeller Repeat-Containing Protein; Peptidase-Like
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MDRLRNVILALTLASAYPAAAVDLTVAAISASPPTVPLGSTVTVESTVAASGGGAVNGFYVHYYLSTDPTITTSDVVLGN RHLSAGLKDGESSTATLTFSPPTSISGTYYVGAIVDTTSQVSESDETNNALAGPVITITKPDLVVTAVSATPATVPLGSP LTVTDTVTCAGGKASNTIYVKYYLSSDPTITTSDVPLGNRYLSAGLKDGESSTATLAFSPPTSISGTYYVGAIVDATSQV SESDETNNALAGPVITITKPDLVVTALTATPTTVPLGSSLTVTDSVTVTGGKTLSSFYVRYYLSTDPVITASDISIGSRS IGAAMTPGQSNSATTTLSPSTSITGTYYVGAIVDSTYIDESDETNNAITGPVITITKPDLVVTALTATPTTVPLGSLTCP PTLDG
Sequences:
>Translated_405_residues MDRLRNVILALTLASAYPAAAVDLTVAAISASPPTVPLGSTVTVESTVAASGGGAVNGFYVHYYLSTDPTITTSDVVLGN RHLSAGLKDGESSTATLTFSPPTSISGTYYVGAIVDTTSQVSESDETNNALAGPVITITKPDLVVTAVSATPATVPLGSP LTVTDTVTCAGGKASNTIYVKYYLSSDPTITTSDVPLGNRYLSAGLKDGESSTATLAFSPPTSISGTYYVGAIVDATSQV SESDETNNALAGPVITITKPDLVVTALTATPTTVPLGSSLTVTDSVTVTGGKTLSSFYVRYYLSTDPVITASDISIGSRS IGAAMTPGQSNSATTTLSPSTSITGTYYVGAIVDSTYIDESDETNNAITGPVITITKPDLVVTALTATPTTVPLGSLTCP PTLDG >Mature_405_residues MDRLRNVILALTLASAYPAAAVDLTVAAISASPPTVPLGSTVTVESTVAASGGGAVNGFYVHYYLSTDPTITTSDVVLGN RHLSAGLKDGESSTATLTFSPPTSISGTYYVGAIVDTTSQVSESDETNNALAGPVITITKPDLVVTAVSATPATVPLGSP LTVTDTVTCAGGKASNTIYVKYYLSSDPTITTSDVPLGNRYLSAGLKDGESSTATLAFSPPTSISGTYYVGAIVDATSQV SESDETNNALAGPVITITKPDLVVTALTATPTTVPLGSSLTVTDSVTVTGGKTLSSFYVRYYLSTDPVITASDISIGSRS IGAAMTPGQSNSATTTLSPSTSITGTYYVGAIVDSTYIDESDETNNAITGPVITITKPDLVVTALTATPTTVPLGSLTCP PTLDG
Specific function: Unknown
COG id: COG1572
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41002; Mature: 41002
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRLRNVILALTLASAYPAAAVDLTVAAISASPPTVPLGSTVTVESTVAASGGGAVNGFY CCHHHHEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEEE VHYYLSTDPTITTSDVVLGNRHLSAGLKDGESSTATLTFSPPTSISGTYYVGAIVDTTSQ EEEEECCCCCEEECEEEECCCEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCHH VSESDETNNALAGPVITITKPDLVVTAVSATPATVPLGSPLTVTDTVTCAGGKASNTIYV HCCCCCCCCEECCCEEEEECCCEEEEEECCCCCEEECCCCEEEEEEEEECCCCCCCEEEE KYYLSSDPTITTSDVPLGNRYLSAGLKDGESSTATLAFSPPTSISGTYYVGAIVDATSQV EEEECCCCEEEECCCCCCCHHEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCHHH SESDETNNALAGPVITITKPDLVVTALTATPTTVPLGSSLTVTDSVTVTGGKTLSSFYVR CCCCCCCCEECCCEEEEECCCEEEEEEECCCCEEECCCCEEEEEEEEEECCCCCEEEEEE YYLSTDPVITASDISIGSRSIGAAMTPGQSNSATTTLSPSTSITGTYYVGAIVDSTYIDE EEECCCCEEEECCCCCCCCCCCCEECCCCCCCCEEEECCCCCCCEEEEEEEEEECEECCC SDETNNAITGPVITITKPDLVVTALTATPTTVPLGSLTCPPTLDG CCCCCCEECCCEEEEECCCEEEEEEECCCCCCCCCCEECCCCCCC >Mature Secondary Structure MDRLRNVILALTLASAYPAAAVDLTVAAISASPPTVPLGSTVTVESTVAASGGGAVNGFY CCHHHHEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEEE VHYYLSTDPTITTSDVVLGNRHLSAGLKDGESSTATLTFSPPTSISGTYYVGAIVDTTSQ EEEEECCCCCEEECEEEECCCEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCHH VSESDETNNALAGPVITITKPDLVVTAVSATPATVPLGSPLTVTDTVTCAGGKASNTIYV HCCCCCCCCEECCCEEEEECCCEEEEEECCCCCEEECCCCEEEEEEEEECCCCCCCEEEE KYYLSSDPTITTSDVPLGNRYLSAGLKDGESSTATLAFSPPTSISGTYYVGAIVDATSQV EEEECCCCEEEECCCCCCCHHEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCHHH SESDETNNALAGPVITITKPDLVVTALTATPTTVPLGSSLTVTDSVTVTGGKTLSSFYVR CCCCCCCCEECCCEEEEECCCEEEEEEECCCCEEECCCCEEEEEEEEEECCCCCEEEEEE YYLSTDPVITASDISIGSRSIGAAMTPGQSNSATTTLSPSTSITGTYYVGAIVDSTYIDE EEECCCCEEEECCCCCCCCCCCCEECCCCCCCCEEEECCCCCCCEEEEEEEEEECEECCC SDETNNAITGPVITITKPDLVVTALTATPTTVPLGSLTCPPTLDG CCCCCCEECCCEEEEECCCEEEEEEECCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA