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The map label for this gene is rhsA [C]

Identifier: 220917636

GI number: 220917636

Start: 2809157

End: 2811154

Strand: Reverse

Name: rhsA [C]

Synonym: A2cp1_2537

Alternate gene names: 220917636

Gene position: 2811154-2809157 (Counterclockwise)

Preceding gene: 220917637

Following gene: 220917635

Centisome position: 55.9

GC content: 65.87

Gene sequence:

>1998_bases
GTGACCGTACGGCGGATACAGCGTTCAGCAGTCTACCGTCGCAAGACGCCCGTCGTCGGGCGGATACGCTTCGCCTACGA
TGCCCGCGGCAACCTGCTCCAGCGCACGACCGATCACGTGGTCGTGACGTACTCGTACGATGGTCTCGACCGCGTGAGGA
CCGTGGCTGCGAGCGACACCTGGGATGACAAGCAGGTCTCGTACGAGCACCGGTACGACGAGCGCGGCCACGCTGGCCTC
CTCACCACCACCGTTGAGCCGGATCGCGTCGTCGAGATCGACTACGACGCCGCCGGGCGGCAGAGCCGCGTGGTCGCTAC
GCAGGTAGACGGCGGCGCGCCAATCGTGACGGAGTACGGCTACGATGTGGATGGGTACGTCGAGACAGTGACGTACCCGT
CAGGACTCGTCGTGAAGGCAGACCGCGATCCCGCGTCGCGCGAGATTCGGAAGTTGAGCACCTCCGACGGCACGATCGTG
TTCGCGGATGCGATCTCGAGGTGGCCCGGCGGTCCGCTGAAGGCCTTCGTGTTCGGGAATGGCCAGAGCTTCAGCCAGAC
CGTCAACCTCCGGTACGAGCCCGCGTCGATCCGTAGCGGCCCGCTTGCGCTCGACTACATGATGACGGCGAGCGGCGACG
TCAGCATGGTCCAGGACGGCGGCAGCTCCTCGCGATTTGCCTATGACTTTCGCGACCGGCTGATCGGCTTCAGCCCGGGA
TTCGGCCCGGGTTCCGATCTGACGCATCGGTACGCCTCCTCGAGTCAGTACACGTCGTCGCCGGTTGTCACGGATCGCAT
CCGCGACTCCGGCGTTCCAGGTGCGTCTGGCTTCGCGCTCACCCATGCCTATGACTACGATTGGCAAACCAACGTCAGCT
CGATCGCCGCGTACTCGGACGGTCAGGCGCACGCGGTCATGTGCCTTCGGCACGACCCGCTGGGCCGCCTGACGCTCGTC
GGCGCCGGCGTCAACTCGGGAGGCGATGGAATCTCGTGTGCGCGCGACTCGGACGTGACCGAGCCGACGGCTCGATTCAA
GTACGACGCTCAAGGGCGGCGCATCGCGCGCTGGGTCGCTGTCACGGGGCAGTGGACGCACTTCGTGTTCGGCCCGGCAG
GCGAGCTGCTGTCTGAGCTGGTGTTCACGAACGATCCGTCGCGGCCGTGGATGCCGCTGCGGGAGTACGTTTGGCTGGAT
GGACGGCCCCTCGCGCAGCTCGAGTACACGCCATCGCAGGCGGCTCCCAGACCGTACTACTTCCACCTGGACCACATCGG
CATGCCTCGGGCGCTATCGAGCCCAGAGGGAGTCACGGTCTGGTCCGCGGCCACGAAGCCCTATGGGGAAGTCAGCGAGA
CGATGACGCCCGATCCCGCCACCGGGCGAACGGTCGTGACGAACCTGCGGCTGCCGGGGCAGTACGACGAGCGGCTGCTC
GGCAGCCTGGGGCTCCAGGGGCCGTACTACAACTGGAACAGGTGGTATCTGCCGGGGGTGGGAAGGTATCTGGAGTTGGA
CCCGATTGCCTCGCGCGGGTTCTTCAACTCGGGCTACGGCGTGGACTGGTACGGGTATGCGGGCCAGAACGCGGTGCGCT
ACACCGACCGGAGAGGCTTATACTGGGCACCTCCGCCGCCGTGGTGGACAGGGATCGGTGCTGCAATTGGCACCGGTATC
GGCATAGGCATCGGGATCTTGTGGCCAGCGCCGACCGGAGGAGATCCTTGCGAAAACAGCCCGCGAGGGTGCGCGGAACC
TGGGCCGGGTCAAGGAGATAGTTCGGACCCTGGACCGGGAGCCGGGGGAGGGGCGGGGGGCGGTGGCGGTGGTTGTCCGC
CCAAGGATCCATGCCGCGTCCAGTACGAAGAGGCTACGGTTAGGTGCGCTGATTGGTACACGTCTGGCGACGACGCCCAG
TACGACGCGTGCATGGAGCGCGCATGGAAGAACTATATCCGGTGTATTAATGGCCTTCCCTGGAAGCAGAACCCATAG

Upstream 100 bases:

>100_bases
GCCCAGATCGGCTCCGATGCGGGTGCTCGAAACCCTCCAACAGAAGCGAGGATGTCCGACCTGAGCAGCGAATCGACCTG
GGGCATGCCGTTCTCTCGCG

Downstream 100 bases:

>100_bases
CGCGAGGGCCTTGGGGTGTGTTCATGAGTCTCTGGAGGCGGTCCATGAAGGATGAGGACAACCCGCTTCGAGCTGCTTCC
GAACTCGCTCGGGCAGGCAA

Product: YD repeat-containing protein

Products: NA

Alternate protein names: YD Repeat-Containing Protein; RhsD Protein; Rhs-Related Protein; YD Repeat Protein; RHS-Related Protein; Rhs Protein; Rhs-Family Protein; RhsD Element Protein; RHS Family Protein; RHS-Repeat-Containing Protein; Protein RhsD; Rhs Family Transmembrane Protein; RHS Protein; RHS-Related Transmembrane Protein; Core Protein; Rhsfamily Protein; Wall-Associated Protein; RHS Repeat-Like Protein; Rhs Family Exported Protein

Number of amino acids: Translated: 665; Mature: 664

Protein sequence:

>665_residues
MTVRRIQRSAVYRRKTPVVGRIRFAYDARGNLLQRTTDHVVVTYSYDGLDRVRTVAASDTWDDKQVSYEHRYDERGHAGL
LTTTVEPDRVVEIDYDAAGRQSRVVATQVDGGAPIVTEYGYDVDGYVETVTYPSGLVVKADRDPASREIRKLSTSDGTIV
FADAISRWPGGPLKAFVFGNGQSFSQTVNLRYEPASIRSGPLALDYMMTASGDVSMVQDGGSSSRFAYDFRDRLIGFSPG
FGPGSDLTHRYASSSQYTSSPVVTDRIRDSGVPGASGFALTHAYDYDWQTNVSSIAAYSDGQAHAVMCLRHDPLGRLTLV
GAGVNSGGDGISCARDSDVTEPTARFKYDAQGRRIARWVAVTGQWTHFVFGPAGELLSELVFTNDPSRPWMPLREYVWLD
GRPLAQLEYTPSQAAPRPYYFHLDHIGMPRALSSPEGVTVWSAATKPYGEVSETMTPDPATGRTVVTNLRLPGQYDERLL
GSLGLQGPYYNWNRWYLPGVGRYLELDPIASRGFFNSGYGVDWYGYAGQNAVRYTDRRGLYWAPPPPWWTGIGAAIGTGI
GIGIGILWPAPTGGDPCENSPRGCAEPGPGQGDSSDPGPGAGGGAGGGGGGCPPKDPCRVQYEEATVRCADWYTSGDDAQ
YDACMERAWKNYIRCINGLPWKQNP

Sequences:

>Translated_665_residues
MTVRRIQRSAVYRRKTPVVGRIRFAYDARGNLLQRTTDHVVVTYSYDGLDRVRTVAASDTWDDKQVSYEHRYDERGHAGL
LTTTVEPDRVVEIDYDAAGRQSRVVATQVDGGAPIVTEYGYDVDGYVETVTYPSGLVVKADRDPASREIRKLSTSDGTIV
FADAISRWPGGPLKAFVFGNGQSFSQTVNLRYEPASIRSGPLALDYMMTASGDVSMVQDGGSSSRFAYDFRDRLIGFSPG
FGPGSDLTHRYASSSQYTSSPVVTDRIRDSGVPGASGFALTHAYDYDWQTNVSSIAAYSDGQAHAVMCLRHDPLGRLTLV
GAGVNSGGDGISCARDSDVTEPTARFKYDAQGRRIARWVAVTGQWTHFVFGPAGELLSELVFTNDPSRPWMPLREYVWLD
GRPLAQLEYTPSQAAPRPYYFHLDHIGMPRALSSPEGVTVWSAATKPYGEVSETMTPDPATGRTVVTNLRLPGQYDERLL
GSLGLQGPYYNWNRWYLPGVGRYLELDPIASRGFFNSGYGVDWYGYAGQNAVRYTDRRGLYWAPPPPWWTGIGAAIGTGI
GIGIGILWPAPTGGDPCENSPRGCAEPGPGQGDSSDPGPGAGGGAGGGGGGCPPKDPCRVQYEEATVRCADWYTSGDDAQ
YDACMERAWKNYIRCINGLPWKQNP
>Mature_664_residues
TVRRIQRSAVYRRKTPVVGRIRFAYDARGNLLQRTTDHVVVTYSYDGLDRVRTVAASDTWDDKQVSYEHRYDERGHAGLL
TTTVEPDRVVEIDYDAAGRQSRVVATQVDGGAPIVTEYGYDVDGYVETVTYPSGLVVKADRDPASREIRKLSTSDGTIVF
ADAISRWPGGPLKAFVFGNGQSFSQTVNLRYEPASIRSGPLALDYMMTASGDVSMVQDGGSSSRFAYDFRDRLIGFSPGF
GPGSDLTHRYASSSQYTSSPVVTDRIRDSGVPGASGFALTHAYDYDWQTNVSSIAAYSDGQAHAVMCLRHDPLGRLTLVG
AGVNSGGDGISCARDSDVTEPTARFKYDAQGRRIARWVAVTGQWTHFVFGPAGELLSELVFTNDPSRPWMPLREYVWLDG
RPLAQLEYTPSQAAPRPYYFHLDHIGMPRALSSPEGVTVWSAATKPYGEVSETMTPDPATGRTVVTNLRLPGQYDERLLG
SLGLQGPYYNWNRWYLPGVGRYLELDPIASRGFFNSGYGVDWYGYAGQNAVRYTDRRGLYWAPPPPWWTGIGAAIGTGIG
IGIGILWPAPTGGDPCENSPRGCAEPGPGQGDSSDPGPGAGGGAGGGGGGCPPKDPCRVQYEEATVRCADWYTSGDDAQY
DACMERAWKNYIRCINGLPWKQNP

Specific function: Rhs Elements Have A Nonessential Function. They May Play An Important Role In The Natural Ecology Of The Cell. [C]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790020, Length=146, Percent_Identity=36.986301369863, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI48994942, Length=109, Percent_Identity=38.5321100917431, Blast_Score=64, Evalue=5e-11,
Organism=Escherichia coli, GI1786917, Length=149, Percent_Identity=34.2281879194631, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72547; Mature: 72416

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRRIQRSAVYRRKTPVVGRIRFAYDARGNLLQRTTDHVVVTYSYDGLDRVRTVAASDT
CCHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCCCEEEEEECCCHHHHHEECCCCC
WDDKQVSYEHRYDERGHAGLLTTTVEPDRVVEIDYDAAGRQSRVVATQVDGGAPIVTEYG
CCCCCCCHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEECC
YDVDGYVETVTYPSGLVVKADRDPASREIRKLSTSDGTIVFADAISRWPGGPLKAFVFGN
CCCCCEEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEHHHHCCCCCEEEEEEEC
GQSFSQTVNLRYEPASIRSGPLALDYMMTASGDVSMVQDGGSSSRFAYDFRDRLIGFSPG
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCEEEEEHHHHHEECCCC
FGPGSDLTHRYASSSQYTSSPVVTDRIRDSGVPGASGFALTHAYDYDWQTNVSSIAAYSD
CCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHEEEECC
GQAHAVMCLRHDPLGRLTLVGAGVNSGGDGISCARDSDVTEPTARFKYDAQGRRIARWVA
CCEEEEEEEECCCCCEEEEEECCCCCCCCCCEECCCCCCCCCHHHEEECCCCCEEEEEEE
VTGQWTHFVFGPAGELLSELVFTNDPSRPWMPLREYVWLDGRPLAQLEYTPSQAAPRPYY
ECCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCHHEEEECCCCCEEEEECCCCCCCCCEE
FHLDHIGMPRALSSPEGVTVWSAATKPYGEVSETMTPDPATGRTVVTNLRLPGQYDERLL
EEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCEEEEEEECCCHHHHHHH
GSLGLQGPYYNWNRWYLPGVGRYLELDPIASRGFFNSGYGVDWYGYAGQNAVRYTDRRGL
HHHCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCE
YWAPPPPWWTGIGAAIGTGIGIGIGILWPAPTGGDPCENSPRGCAEPGPGQGDSSDPGPG
EECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGGGAGGGGGGCPPKDPCRVQYEEATVRCADWYTSGDDAQYDACMERAWKNYIRCINGLP
CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC
WKQNP
CCCCC
>Mature Secondary Structure 
TVRRIQRSAVYRRKTPVVGRIRFAYDARGNLLQRTTDHVVVTYSYDGLDRVRTVAASDT
CHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCCCEEEEEECCCHHHHHEECCCCC
WDDKQVSYEHRYDERGHAGLLTTTVEPDRVVEIDYDAAGRQSRVVATQVDGGAPIVTEYG
CCCCCCCHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEECC
YDVDGYVETVTYPSGLVVKADRDPASREIRKLSTSDGTIVFADAISRWPGGPLKAFVFGN
CCCCCEEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEHHHHCCCCCEEEEEEEC
GQSFSQTVNLRYEPASIRSGPLALDYMMTASGDVSMVQDGGSSSRFAYDFRDRLIGFSPG
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCEEEEEHHHHHEECCCC
FGPGSDLTHRYASSSQYTSSPVVTDRIRDSGVPGASGFALTHAYDYDWQTNVSSIAAYSD
CCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHEEEECC
GQAHAVMCLRHDPLGRLTLVGAGVNSGGDGISCARDSDVTEPTARFKYDAQGRRIARWVA
CCEEEEEEEECCCCCEEEEEECCCCCCCCCCEECCCCCCCCCHHHEEECCCCCEEEEEEE
VTGQWTHFVFGPAGELLSELVFTNDPSRPWMPLREYVWLDGRPLAQLEYTPSQAAPRPYY
ECCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCHHEEEECCCCCEEEEECCCCCCCCCEE
FHLDHIGMPRALSSPEGVTVWSAATKPYGEVSETMTPDPATGRTVVTNLRLPGQYDERLL
EEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCEEEEEEECCCHHHHHHH
GSLGLQGPYYNWNRWYLPGVGRYLELDPIASRGFFNSGYGVDWYGYAGQNAVRYTDRRGL
HHHCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCE
YWAPPPPWWTGIGAAIGTGIGIGIGILWPAPTGGDPCENSPRGCAEPGPGQGDSSDPGPG
EECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGGGAGGGGGGCPPKDPCRVQYEEATVRCADWYTSGDDAQYDACMERAWKNYIRCINGLP
CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC
WKQNP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA